Merge branch 'master' of https://github.com/TadasBaltrusaitis/OpenFace into feature/Windows-GUI

# Conflicts:
#	.gitignore
#	exe/FaceLandmarkVidMulti/FaceLandmarkVidMulti.cpp
#	lib/local/FaceAnalyser/FaceAnalyser.vcxproj
#	lib/local/LandmarkDetector/include/LandmarkDetectorUtils.h
#	lib/local/LandmarkDetector/src/LandmarkDetectorUtils.cpp
#	matlab_runners/Demos/feature_extraction_demo_vid.m
#	matlab_runners/Demos/gaze_extraction_demo_vid.m

.gitignore

@@ -77,3 +77,12 @@ matlab_runners/Head Pose Experiments/experiments/ict_out/
 OpenFace\.VC\.db
 matlab_version/face_validation/vlfeat-0.9.20/
 matlab_version/face_validation/trained/intermediate/
+lib/local/GazeAnalyser/x64/
+lib/local/Utilities/x64/
+exe/FeatureExtraction/processed/
+exe/FaceLandmarkImg/processed/
+exe/FeatureExtraction/processed_features/
+matlab_runners/Demos/processed_features/
+*.db
+exe/releases/OpenFace_0.3.0_win_x64/
+exe/releases/OpenFace_0.3.0_win_x86/

.travis.yml

@@ -1,5 +1,8 @@
 language: cpp
 
+dist: trusty
+sudo: required
+
 branches:
   only:
     - master
@@ -9,32 +12,29 @@ compiler:
   - gcc
 
 os:
-  - osx
   - linux  
   
 before_install:
 
   # OpenCV dependencies and boost
   - if [ ${TRAVIS_OS_NAME} = linux ]; then  
+      sudo apt-get update;
+      sudo apt-get install libopenblas-dev;
       sudo apt-get install git libgtk2.0-dev pkg-config libavcodec-dev libavformat-dev libswscale-dev;      
       sudo apt-get install python-dev python-numpy libtbb2 libtbb-dev libjpeg-dev libpng-dev libtiff-dev libjasper-dev libdc1394-22-dev checkinstall;
-      sudo add-apt-repository -y ppa:boost-latest/ppa;
+      sudo apt-get install cmake;
-      sudo apt-get update;
       sudo apt-get install libboost1.55-all-dev;
       wget https://github.com/Itseez/opencv/archive/3.1.0.zip;
-      sudo unzip 3.1.0.zip;
+      unzip -q 3.1.0.zip;
       cd opencv-3.1.0;
-      sudo mkdir build;
+      mkdir build;
       cd build;
     fi
 
   # g++4.8.1
   - if [ "$CXX" = "g++" ]; then
       if [ ${TRAVIS_OS_NAME} = linux ]; then
-        sudo add-apt-repository -y ppa:ubuntu-toolchain-r/test; 
+        $CXX --version;
-        sudo apt-get update -qq;
-        sudo apt-get install -qq g++-4.8; 
-        export CXX="g++-4.8";		
         sudo cmake -D CMAKE_BUILD_TYPE=RELEASE -D WITH_V4L=ON -D WITH_OPENCL=OFF -D INSTALL_C_EXAMPLES=OFF -D BUILD_EXAMPLES=OFF -D BUILD_TESTS=OFF -D BUILD_PERF_TESTS=OFF -D BUILD_EXAMPLES=OFF -D INSTALL_PYTHON_EXAMPLES=OFF ..;
       fi 
     fi
@@ -43,7 +43,6 @@ before_install:
   - if [ "$CXX" = "clang++" ]; then
       if [ ${TRAVIS_OS_NAME} = linux ]; then  
         $CXX --version;
-        sudo sed -i -e 's/^Defaults\tsecure_path.*$//' /etc/sudoers;
         sudo cmake -D CMAKE_BUILD_TYPE=RELEASE -D WITH_V4L=ON -D WITH_OPENCL=OFF -D INSTALL_C_EXAMPLES=OFF -D BUILD_EXAMPLES=OFF -D BUILD_TESTS=OFF -D BUILD_PERF_TESTS=OFF -D BUILD_EXAMPLES=OFF -D INSTALL_PYTHON_EXAMPLES=OFF -D WITH_TBB=ON ..;
       fi
     fi
@@ -51,8 +50,10 @@ before_install:
   - if [ ${TRAVIS_OS_NAME} = osx ]; then  
       brew update;
       brew install tbb;
+      brew tap homebrew/science;
+      brew install vtk;
       wget https://github.com/Itseez/opencv/archive/3.1.0.zip;
-      sudo unzip 3.1.0.zip;
+      unzip -q 3.1.0.zip;
       cd opencv-3.1.0;
       sudo mkdir build;
       cd build;
@@ -70,9 +71,7 @@ script:
   - cd build
   - cmake -D CMAKE_BUILD_TYPE=RELEASE CMAKE_CXX_FLAGS="-std=c++11" -D CMAKE_EXE_LINKER_FLAGS="-std=c++11" .. 
   - make -j2
-  - ../build/bin/FaceLandmarkImg -fdir "../samples/" -ofdir "./demo_img/" -oidir "./demo_img/" -wild -q
+  - ../build/bin/FaceLandmarkImg -fdir "../samples/" -out_dir "./demo_img"  -wild -q
-  - ../build/bin/FaceLandmarkImg -inroot ../samples -f sample1.jpg -outroot data -of sample1.txt -op sample1.3d -oi sample1.bmp -multi_view 1 -wild -q
+  - ../build/bin/FaceLandmarkImg -inroot ../samples -f sample1.jpg -out_dir data -of sample1.txt -multi_view 1 -wild -q
-  - ../build/bin/FaceLandmarkVidMulti -inroot ../samples -f multi_face.avi -outroot output -ov multi_face.avi -q
+  - ../build/bin/FeatureExtraction -f "../samples/2015-10-15-15-14.avi" -out_dir output -q
-  - ../build/bin/FeatureExtraction -f "../samples/2015-10-15-15-14.avi" -outroot output_features -ov default.avi -of "default.txt" -simalign aligned -ov feat_test.avi -hogalign hog_test.dat -q
+  - ../build/bin/FeatureExtraction -f "../samples/2015-10-15-15-14.avi"  -simsize 200 -simscale 0.5 -q
-  - ../build/bin/FeatureExtraction -f "../samples/2015-10-15-15-14.avi" -outroot output_features -simsize 200 -simscale 0.5 -ov default.avi -of "default.txt" -simalign aligned -ov feat_test.avi -hogalign hog_test.dat -q
-  - ../build/bin/FaceLandmarkVid -inroot ../samples -f 2015-10-15-15-14.avi -f multi_face.avi -outroot output_data -ov 1.avi -ov 2.avi -q

CMakeLists.txt

@@ -13,7 +13,7 @@ find_package( BLAS REQUIRED )
 include_directories( ${BLAS_INCLUDE_DIRS} )
 LINK_DIRECTORIES(${BLAS_LIBRARY_DIRS})	
 
-find_package( OpenCV REQUIRED )
+find_package( OpenCV 3.1 REQUIRED )
 
 MESSAGE("OpenCV information:") 
 MESSAGE("  OpenCV_INCLUDE_DIRS: ${OpenCV_INCLUDE_DIRS}") 
@@ -191,6 +191,8 @@ add_subdirectory(lib/local/LandmarkDetector)
 add_subdirectory(lib/local/FaceAnalyser)
 # Gaze library
 add_subdirectory(lib/local/GazeAnalyser)
+# Utilities library
+add_subdirectory(lib/local/Utilities)
 # executables
 add_subdirectory(exe/FaceLandmarkImg)
 add_subdirectory(exe/FaceLandmarkVid)

OpenFace.sln

@@ -39,6 +39,8 @@ Project("{FAE04EC0-301F-11D3-BF4B-00C04F79EFBC}") = "OpenFaceDemo", "gui\OpenFac
 EndProject
 Project("{FAE04EC0-301F-11D3-BF4B-00C04F79EFBC}") = "HeadPoseLive", "gui\HeadPose-live\HeadPoseLive.csproj", "{F396362D-821E-4EA6-9BBF-1F6050844118}"
 EndProject
+Project("{8BC9CEB8-8B4A-11D0-8D11-00A0C91BC942}") = "Utilities", "lib\local\Utilities\Utilities.vcxproj", "{8E741EA2-9386-4CF2-815E-6F9B08991EAC}"
+EndProject
 Global
 	GlobalSection(SolutionConfigurationPlatforms) = preSolution
 		Debug|Win32 = Debug|Win32
@@ -158,6 +160,14 @@ Global
 		{5F915541-F531-434F-9C81-79F5DB58012B}.Release|Win32.Build.0 = Release|Win32
 		{5F915541-F531-434F-9C81-79F5DB58012B}.Release|x64.ActiveCfg = Release|x64
 		{5F915541-F531-434F-9C81-79F5DB58012B}.Release|x64.Build.0 = Release|x64
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC}.Debug|Win32.ActiveCfg = Debug|Win32
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC}.Debug|Win32.Build.0 = Debug|Win32
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC}.Debug|x64.ActiveCfg = Debug|x64
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC}.Debug|x64.Build.0 = Debug|x64
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC}.Release|Win32.ActiveCfg = Release|Win32
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC}.Release|Win32.Build.0 = Release|Win32
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC}.Release|x64.ActiveCfg = Release|x64
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC}.Release|x64.Build.0 = Release|x64
 	EndGlobalSection
 	GlobalSection(SolutionProperties) = preSolution
 		HideSolutionNode = FALSE
@@ -177,5 +187,6 @@ Global
 		{E143A2AA-312E-4DFE-B61D-9A87CCBC8E90} = {C9D8D0B0-11EC-41CB-8524-2DDB5BE94297}
 		{F396362D-821E-4EA6-9BBF-1F6050844118} = {C9D8D0B0-11EC-41CB-8524-2DDB5BE94297}
 		{5F915541-F531-434F-9C81-79F5DB58012B} = {99FEBA13-BDDF-4076-B57E-D8EF4076E20D}
+		{8E741EA2-9386-4CF2-815E-6F9B08991EAC} = {99FEBA13-BDDF-4076-B57E-D8EF4076E20D}
 	EndGlobalSection
 EndGlobal

README.md

@@ -1,19 +1,21 @@
-# OpenFace: an open source facial behavior analysis toolkit
+# OpenFace 0.3.0: an open source facial behavior analysis toolkit
 
 [![Build Status](https://travis-ci.org/TadasBaltrusaitis/OpenFace.svg?branch=master)](https://travis-ci.org/TadasBaltrusaitis/OpenFace)
 [![Build status](https://ci.appveyor.com/api/projects/status/8msiklxfbhlnsmxp/branch/master?svg=true)](https://ci.appveyor.com/project/TadasBaltrusaitis/openface/branch/master)
 
-Over the past few years, there has been an increased interest in automatic facial behavior analysis and understanding. We present OpenFace – an open source tool intended for computer vision and machine learning researchers, affective computing community and people interested in building interactive applications based on facial behavior analysis. OpenFace is the first open source tool capable of facial landmark detection, head pose estimation, facial action unit recognition, and eye-gaze estimation. The computer vision algorithms which represent the core of OpenFace demonstrate state-of-the-art results in all of the above mentioned tasks. Furthermore, our tool is capable of real-time performance and is able to run from a simple webcam without any specialist hardware.
+Over the past few years, there has been an increased interest in automatic facial behavior analysis and understanding. We present OpenFace – a tool intended for computer vision and machine learning researchers, affective computing community and people interested in building interactive applications based on facial behavior analysis. OpenFace is the first toolkit capable of facial landmark detection, head pose estimation, facial action unit recognition, and eye-gaze estimation with available source code. The computer vision algorithms which represent the core of OpenFace demonstrate state-of-the-art results in all of the above mentioned tasks. Furthermore, our tool is capable of real-time performance and is able to run from a simple webcam without any specialist hardware.
 
-The code was written mainly by Tadas Baltrusaitis during his time at the Language Technologies Institute at the Carnegie Mellon University; Computer Laboratory, University of Cambridge; and Institute for Creative Technologies, University of Southern California.
+![Multicomp logo](https://github.com/TadasBaltrusaitis/OpenFace/blob/master/imgs/muticomp_logo_black.png)
 
-Special thanks goes to Louis-Philippe Morency and his MultiComp Lab at Institute for Creative Technologies for help in writing and testing the code, and Erroll Wood for the gaze estimation work.
+![Rainbow logo](https://github.com/TadasBaltrusaitis/OpenFace/blob/master/imgs/rainbow-logo.gif)
+
+OpenFace is an implementation of a number of research papers from the Multicomp group, Language Technologies Institute at the Carnegie Mellon University and Rainbow Group, Computer Laboratory, University of Cambridge. The founder of the project and main developer is Tadas Baltrušaitis.
+
+Special thanks goes to Louis-Philippe Morency and his MultiComp Lab at Carnegie Mellon University for help in writing and testing the code, and Erroll Wood for the gaze estimation work.
 
 ## WIKI
 **For instructions of how to install/compile/use the project please see [WIKI](https://github.com/TadasBaltrusaitis/OpenFace/wiki)**
 
-More details about the project - http://www.cl.cam.ac.uk/research/rainbow/projects/openface/
-
 ## Functionality
 
 The system is capable of performing a number of facial analysis tasks:
@@ -68,17 +70,18 @@ Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson
 in *Facial Expression Recognition and Analysis Challenge*, 
 *IEEE International Conference on Automatic Face and Gesture Recognition*, 2015 
 
-# Copyright
-
-Copyright can be found in the Copyright.txt
-
-You have to respect boost, TBB, dlib, OpenBLAS, and OpenCV licenses.
-
 # Commercial license
 
 For inquiries about the commercial licensing of the OpenFace toolkit please contact innovation@cmu.edu
 
 # Final remarks
 
-I did my best to make sure that the code runs out of the box but there are always issues and I would be grateful for your understanding that this is research code and not full fledged product. However, if you encounter any problems/bugs/issues please contact me on github or by emailing me at Tadas.Baltrusaitis@cl.cam.ac.uk for any bug reports/questions/suggestions. 
+I did my best to make sure that the code runs out of the box but there are always issues and I would be grateful for your understanding that this is research code and not full fledged product. However, if you encounter any problems/bugs/issues please contact me on github or by emailing me at Tadas.Baltrusaitis@cl.cam.ac.uk for any bug reports/questions/suggestions. I prefer questions and bug reports on github as that provides visibility to others who might be encountering same issues or who have the same questions.
 
+# Copyright
+
+Copyright can be found in the Copyright.txt
+
+You have to respect boost, TBB, dlib, OpenBLAS, and OpenCV licenses.
+
+Furthermore you have to respect the licenses of the datasets used for model training - https://github.com/TadasBaltrusaitis/OpenFace/wiki/Datasets

appveyor.yml

@@ -6,7 +6,6 @@ branches:
   - /^feature-.*$/
 max_jobs: 4  
 configuration:
-- Debug
 - Release
 platform:
 - x64
@@ -21,9 +20,9 @@ test_script:
   - cmd: if exist Debug (cd Debug)
   - cmd: if exist Release (cd Release)
   - cmd: dir
-  - cmd: if exist "../samples" (FaceLandmarkImg.exe -fdir "../samples/" -ofdir "./demo_img/" -oidir "./demo_img/" -wild -q) else (FaceLandmarkImg.exe -fdir "../../samples/" -ofdir "./demo_img/" -oidir "./demo_img/" -wild -q)
+  - cmd: if exist "../samples" (FaceLandmarkImg.exe -fdir "../samples/" -out_dir "./demo_img/" -wild -q) else (FaceLandmarkImg.exe -fdir "../../samples/" -out_dir "./demo_img/" -wild -q)
-  - cmd: if exist "../samples" (FaceLandmarkImg.exe -inroot ../samples -f sample1.jpg -outroot out_data -of sample1.pts -op sample1.3d -oi sample1.bmp -q) else (FaceLandmarkImg.exe -inroot ../../samples -f sample1.jpg -outroot out_data -of sample1.pts -op sample1.3d -oi sample1.bmp -q)
+  - cmd: if exist "../samples" (FaceLandmarkImg.exe -inroot ../samples -f sample1.jpg -out_dir out_data -of sample1.pts -q) else (FaceLandmarkImg.exe -inroot ../../samples -f sample1.jpg -out_dir out_data -q)
-  - cmd: if exist "../samples" (FaceLandmarkVidMulti.exe -inroot ../samples -f multi_face.avi -ov multi_face.avi -q) else (FaceLandmarkVidMulti.exe -inroot ../../samples -f multi_face.avi -ov multi_face.avi -q)
+  - cmd: if exist "../samples" (FaceLandmarkVidMulti.exe -inroot ../samples -f multi_face.avi -q) else (FaceLandmarkVidMulti.exe -inroot ../../samples -f multi_face.avi -q)
-  - cmd: if exist "../samples" (FeatureExtraction.exe -f "../samples/default.wmv" -outroot output_features -of "default.txt" -simalign aligned -ov feat_track.avi -hogalign hog_test.dat -q) else (FeatureExtraction.exe -f "../../samples/default.wmv" -outroot output_features -of "default.txt" -simalign aligned -ov feat_track.avi -hogalign hog_test.dat -q)
+  - cmd: if exist "../samples" (FeatureExtraction.exe -f "../samples/default.wmv" -q) else (FeatureExtraction.exe -f "../../samples/default.wmv" -q)
-  - cmd: if exist "../samples" (FeatureExtraction.exe -f "../samples/default.wmv" -outroot output_features -of "default.txt" -simalign aligned -simsize 200 -simscale 0.5 -ov feat_track.avi -hogalign hog_test.dat -q) else (FeatureExtraction.exe -f "../../samples/default.wmv" -outroot output_features -of "default.txt" -simalign aligned -simsize 200 -simscale 0.5 -ov feat_track.avi -hogalign hog_test.dat -q)
+  - cmd: if exist "../samples" (FeatureExtraction.exe -f "../samples/default.wmv" -simsize 200 -simscale 0.5 -q) else (FeatureExtraction.exe -f "../../samples/default.wmv" -simsize 200 -simscale 0.5 -ov feat_track.avi -q)
-  - cmd: if exist "../samples" (FaceLandmarkVid.exe -f "../samples/default.wmv" -ov track.avi -q) else (FaceLandmarkVid.exe -f "../../samples/default.wmv" -ov track.avi -q)
+  - cmd: if exist "../samples" (FaceLandmarkVid.exe -f "../samples/default.wmv"  -q) else (FaceLandmarkVid.exe -f "../../samples/default.wmv" -q)

exe/FaceLandmarkImg/CMakeLists.txt

@@ -7,11 +7,13 @@ include_directories(${LandmarkDetector_SOURCE_DIR}/include)
 include_directories(../../lib/local/LandmarkDetector/include)
 include_directories(../../lib/local/FaceAnalyser/include)	
 include_directories(../../lib/local/GazeAnalyser/include)	
+include_directories(../../lib/local/Utilities/include)	
 			
 add_executable(FaceLandmarkImg FaceLandmarkImg.cpp)
 target_link_libraries(FaceLandmarkImg LandmarkDetector)
 target_link_libraries(FaceLandmarkImg FaceAnalyser)
 target_link_libraries(FaceLandmarkImg GazeAnalyser)
+target_link_libraries(FaceLandmarkImg Utilities)
 target_link_libraries(FaceLandmarkImg dlib)
 
 target_link_libraries(FaceLandmarkImg ${OpenCV_LIBS} ${Boost_LIBRARIES} ${TBB_LIBRARIES}  ${BLAS_LIBRARIES})

exe/FaceLandmarkImg/FaceLandmarkImg.cpp

@@ -54,6 +54,13 @@
 #include <FaceAnalyser.h>
 #include <GazeEstimation.h>
 
+#include <ImageCapture.h>
+#include <Visualizer.h>
+#include <VisualizationUtils.h>
+#include <RecorderOpenFace.h>
+#include <RecorderOpenFaceParameters.h>
+
+
 #ifndef CONFIG_DIR
 #define CONFIG_DIR "~"
 #endif
@@ -72,337 +79,72 @@ vector<string> get_arguments(int argc, char **argv)
 	return arguments;
 }
 
-void convert_to_grayscale(const cv::Mat& in, cv::Mat& out)
-{
-	if(in.channels() == 3)
-	{
-		// Make sure it's in a correct format
-		if(in.depth() != CV_8U)
-		{
-			if(in.depth() == CV_16U)
-			{
-				cv::Mat tmp = in / 256;
-				tmp.convertTo(tmp, CV_8U);
-				cv::cvtColor(tmp, out, CV_BGR2GRAY);
-			}
-		}
-		else
-		{
-			cv::cvtColor(in, out, CV_BGR2GRAY);
-		}
-	}
-	else if(in.channels() == 4)
-	{
-		cv::cvtColor(in, out, CV_BGRA2GRAY);
-	}
-	else
-	{
-		if(in.depth() == CV_16U)
-		{
-			cv::Mat tmp = in / 256;
-			out = tmp.clone();
-		}
-		else if(in.depth() != CV_8U)
-		{
-			in.convertTo(out, CV_8U);
-		}
-		else
-		{
-			out = in.clone();
-		}
-	}
-}
-
-// Useful utility for creating directories for storing the output files
-void create_directory_from_file(string output_path)
-{
-
-	// Creating the right directory structure
-
-	// First get rid of the file
-	auto p = boost::filesystem::path(boost::filesystem::path(output_path).parent_path());
-
-	if (!p.empty() && !boost::filesystem::exists(p))
-	{
-		bool success = boost::filesystem::create_directories(p);
-		if (!success)
-		{
-			cout << "Failed to create a directory... " << p.string() << endl;
-		}
-	}
-}
-
-// This will only be accurate when camera parameters are accurate, useful for work on 3D data
-void write_out_pose_landmarks(const string& outfeatures, const cv::Mat_<double>& shape3D, const cv::Vec6d& pose, const cv::Point3f& gaze0, const cv::Point3f& gaze1)
-{
-	create_directory_from_file(outfeatures);
-	std::ofstream featuresFile;
-	featuresFile.open(outfeatures);
-
-	if (featuresFile.is_open())
-	{
-		int n = shape3D.cols;
-		featuresFile << "version: 1" << endl;
-		featuresFile << "npoints: " << n << endl;
-		featuresFile << "{" << endl;
-
-		for (int i = 0; i < n; ++i)
-		{
-			// Use matlab format, so + 1
-			featuresFile << shape3D.at<double>(i) << " " << shape3D.at<double>(i + n) << " " << shape3D.at<double>(i + 2*n) << endl;
-		}
-		featuresFile << "}" << endl;
-
-		// Do the pose and eye gaze if present as well
-		featuresFile << "pose: eul_x, eul_y, eul_z: " << endl;
-		featuresFile << "{" << endl;
-		featuresFile << pose[3] << " " << pose[4] << " " << pose[5] << endl;
-		featuresFile << "}" << endl;
-
-		// Do the pose and eye gaze if present as well
-		featuresFile << "gaze_vec: dir_x_1, dir_y_1, dir_z_1, dir_x_2, dir_y_2, dir_z_2: " << endl;
-		featuresFile << "{" << endl;
-		featuresFile << gaze0.x << " " << gaze0.y << " " << gaze0.z << " " << gaze1.x << " " << gaze1.y << " " << gaze1.z << endl;
-		featuresFile << "}" << endl;
-
-		featuresFile.close();
-	}
-}
-
-void write_out_landmarks(const string& outfeatures, const LandmarkDetector::CLNF& clnf_model, const cv::Vec6d& pose, const cv::Point3f& gaze0, const cv::Point3f& gaze1, const cv::Vec2d gaze_angle, std::vector<std::pair<std::string, double>> au_intensities, std::vector<std::pair<std::string, double>> au_occurences, bool output_gaze)
-{
-	create_directory_from_file(outfeatures);
-	std::ofstream featuresFile;
-	featuresFile.open(outfeatures);
-
-	if (featuresFile.is_open())
-	{
-		int n = clnf_model.patch_experts.visibilities[0][0].rows;
-		featuresFile << "version: 2" << endl;
-		featuresFile << "npoints: " << n << endl;
-		featuresFile << "{" << endl;
-
-		for (int i = 0; i < n; ++i)
-		{
-			// Use matlab format, so + 1
-			featuresFile << clnf_model.detected_landmarks.at<double>(i) + 1 << " " << clnf_model.detected_landmarks.at<double>(i + n) + 1 << endl;
-		}
-		featuresFile << "}" << endl;
-
-		// Do the pose and eye gaze if present as well
-		featuresFile << "pose: eul_x, eul_y, eul_z: " << endl;
-		featuresFile << "{" << endl;
-		featuresFile << pose[3] << " " << pose[4] << " " << pose[5] << endl;
-		featuresFile << "}" << endl;
-
-		if(output_gaze)
-		{
-			featuresFile << "gaze: dir_x_1, dir_y_1, dir_z_1, dir_x_2, dir_y_2, dir_z_2: " << endl;
-			featuresFile << "{" << endl;
-			featuresFile << gaze0.x << " " << gaze0.y << " " << gaze0.z << " " << gaze1.x << " " << gaze1.y << " " << gaze1.z << endl;
-			featuresFile << "}" << endl;
-
-			featuresFile << "gaze: angle_x, angle_y: " << endl;
-			featuresFile << "{" << endl;
-			featuresFile << gaze_angle[0] << " " << gaze_angle[1] << endl;
-			featuresFile << "}" << endl;
-
-			std::vector<cv::Point2d> eye_landmark_points = LandmarkDetector::CalculateAllEyeLandmarks(clnf_model);
-
-			featuresFile << "eye_lmks: " << eye_landmark_points.size() << endl;
-			featuresFile << "{" << endl;
-
-			for (int i = 0; i < eye_landmark_points.size(); ++i)
-			{
-				// Use matlab format, so + 1
-				featuresFile << (eye_landmark_points[i].x + 1) << " " << (eye_landmark_points[i].y + 1) << endl;
-			}
-			featuresFile << "}" << endl;
-		}
-		// Do the au intensities
-		featuresFile << "au intensities: " << au_intensities.size() << endl;
-		featuresFile << "{" << endl;
-
-		for (size_t i = 0; i < au_intensities.size(); ++i)
-		{
-			// Use matlab format, so + 1
-			featuresFile << au_intensities[i].first << " " << au_intensities[i].second << endl;
-		}
-
-		featuresFile << "}" << endl;
-
-		// Do the au occurences
-		featuresFile << "au occurences: " << au_occurences.size() << endl;
-		featuresFile << "{" << endl;
-
-		for (size_t i = 0; i < au_occurences.size(); ++i)
-		{
-			// Use matlab format, so + 1
-			featuresFile << au_occurences[i].first << " " << au_occurences[i].second << endl;
-		}
-
-		featuresFile << "}" << endl;
-
-
-		featuresFile.close();
-	}
-}
-
-void create_display_image(const cv::Mat& orig, cv::Mat& display_image, LandmarkDetector::CLNF& clnf_model)
-{
-	
-	// Draw head pose if present and draw eye gaze as well
-
-	// preparing the visualisation image
-	display_image = orig.clone();		
-
-	// Creating a display image			
-	cv::Mat xs = clnf_model.detected_landmarks(cv::Rect(0, 0, 1, clnf_model.detected_landmarks.rows/2));
-	cv::Mat ys = clnf_model.detected_landmarks(cv::Rect(0, clnf_model.detected_landmarks.rows/2, 1, clnf_model.detected_landmarks.rows/2));
-	double min_x, max_x, min_y, max_y;
-
-	cv::minMaxLoc(xs, &min_x, &max_x);
-	cv::minMaxLoc(ys, &min_y, &max_y);
-
-	double width = max_x - min_x;
-	double height = max_y - min_y;
-
-	int minCropX = max((int)(min_x-width/3.0),0);
-	int minCropY = max((int)(min_y-height/3.0),0);
-
-	int widthCrop = min((int)(width*5.0/3.0), display_image.cols - minCropX - 1);
-	int heightCrop = min((int)(height*5.0/3.0), display_image.rows - minCropY - 1);
-
-	double scaling = 350.0/widthCrop;
-	
-	// first crop the image
-	display_image = display_image(cv::Rect((int)(minCropX), (int)(minCropY), (int)(widthCrop), (int)(heightCrop)));
-		
-	// now scale it
-	cv::resize(display_image.clone(), display_image, cv::Size(), scaling, scaling);
-
-	// Make the adjustments to points
-	xs = (xs - minCropX)*scaling;
-	ys = (ys - minCropY)*scaling;
-
-	cv::Mat shape = clnf_model.detected_landmarks.clone();
-
-	xs.copyTo(shape(cv::Rect(0, 0, 1, clnf_model.detected_landmarks.rows/2)));
-	ys.copyTo(shape(cv::Rect(0, clnf_model.detected_landmarks.rows/2, 1, clnf_model.detected_landmarks.rows/2)));
-
-	// Do the shifting for the hierarchical models as well
-	for (size_t part = 0; part < clnf_model.hierarchical_models.size(); ++part)
-	{
-		cv::Mat xs = clnf_model.hierarchical_models[part].detected_landmarks(cv::Rect(0, 0, 1, clnf_model.hierarchical_models[part].detected_landmarks.rows / 2));
-		cv::Mat ys = clnf_model.hierarchical_models[part].detected_landmarks(cv::Rect(0, clnf_model.hierarchical_models[part].detected_landmarks.rows / 2, 1, clnf_model.hierarchical_models[part].detected_landmarks.rows / 2));
-
-		xs = (xs - minCropX)*scaling;
-		ys = (ys - minCropY)*scaling;
-
-		cv::Mat shape = clnf_model.hierarchical_models[part].detected_landmarks.clone();
-
-		xs.copyTo(shape(cv::Rect(0, 0, 1, clnf_model.hierarchical_models[part].detected_landmarks.rows / 2)));
-		ys.copyTo(shape(cv::Rect(0, clnf_model.hierarchical_models[part].detected_landmarks.rows / 2, 1, clnf_model.hierarchical_models[part].detected_landmarks.rows / 2)));
-
-	}
-
-	LandmarkDetector::Draw(display_image, clnf_model);
-						
-}
-
 int main (int argc, char **argv)
 {
 		
 	//Convert arguments to more convenient vector form
 	vector<string> arguments = get_arguments(argc, argv);
 
-	// Some initial parameters that can be overriden from command line
+	// Prepare for image reading
-	vector<string> files, output_images, output_landmark_locations, output_pose_locations;
+	Utilities::ImageCapture image_reader;
 
-	// Bounding boxes for a face in each image (optional)
+	// The sequence reader chooses what to open based on command line arguments provided
-	vector<cv::Rect_<double> > bounding_boxes;
+	if (!image_reader.Open(arguments))
+	{
+		cout << "Could not open any images" << endl;
+		return 1;
+	}
 
-	LandmarkDetector::get_image_input_output_params(files, output_landmark_locations, output_pose_locations, output_images, bounding_boxes, arguments);
+	// Load the models if images found
 	LandmarkDetector::FaceModelParameters det_parameters(arguments);
-	// No need to validate detections, as we're not doing tracking
-	det_parameters.validate_detections = false;
-
-	// Grab camera parameters if provided (only used for pose and eye gaze and are quite important for accurate estimates)
-	float fx = 0, fy = 0, cx = 0, cy = 0;
-	int device = -1;
-	LandmarkDetector::get_camera_params(device, fx, fy, cx, cy, arguments);
-
-	// If cx (optical axis centre) is undefined will use the image size/2 as an estimate
-	bool cx_undefined = false;
-	bool fx_undefined = false;
-	if (cx == 0 || cy == 0)
-	{
-		cx_undefined = true;
-	}
-	if (fx == 0 || fy == 0)
-	{
-		fx_undefined = true;
-	}
 
 	// The modules that are being used for tracking
 	cout << "Loading the model" << endl;
-	LandmarkDetector::CLNF clnf_model(det_parameters.model_location);
+	LandmarkDetector::CLNF face_model(det_parameters.model_location);
 	cout << "Model loaded" << endl;
 
-	cv::CascadeClassifier classifier(det_parameters.face_detector_location);
-	dlib::frontal_face_detector face_detector_hog = dlib::get_frontal_face_detector();
-
 	// Load facial feature extractor and AU analyser (make sure it is static)
 	FaceAnalysis::FaceAnalyserParameters face_analysis_params(arguments);
 	face_analysis_params.OptimizeForImages();
 	FaceAnalysis::FaceAnalyser face_analyser(face_analysis_params);
 
-	bool visualise = !det_parameters.quiet_mode;
+	// If bounding boxes not provided, use a face detector
+	cv::CascadeClassifier classifier(det_parameters.face_detector_location);
+	dlib::frontal_face_detector face_detector_hog = dlib::get_frontal_face_detector();
 
-	// Do some image loading
+	// A utility for visualizing the results
-	for(size_t i = 0; i < files.size(); i++)
+	Utilities::Visualizer visualizer(arguments);
+
+	cv::Mat captured_image;
+
+ 	captured_image = image_reader.GetNextImage();
+
+	cout << "Starting tracking" << endl;
+	while (!captured_image.empty())
 	{
-		string file = files.at(i);
 
-		// Loading image
+		Utilities::RecorderOpenFaceParameters recording_params(arguments, false, false,
-		cv::Mat read_image = cv::imread(file, -1);
+			image_reader.fx, image_reader.fy, image_reader.cx, image_reader.cy);
+		Utilities::RecorderOpenFace open_face_rec(image_reader.name, recording_params, arguments);
 
-		if (read_image.empty())
+		visualizer.SetImage(captured_image, image_reader.fx, image_reader.fy, image_reader.cx, image_reader.cy);
-		{
+
-			cout << "Could not read the input image" << endl;
+		if (recording_params.outputGaze() && !face_model.eye_model)
-			return 1;
+			cout << "WARNING: no eye model defined, but outputting gaze" << endl;
-		}
 
 		// Making sure the image is in uchar grayscale
-		cv::Mat_<uchar> grayscale_image;
+		cv::Mat_<uchar> grayscale_image = image_reader.GetGrayFrame();
-		convert_to_grayscale(read_image, grayscale_image);
-		
-
-		// If optical centers are not defined just use center of image
-		if (cx_undefined)
-		{
-			cx = grayscale_image.cols / 2.0f;
-			cy = grayscale_image.rows / 2.0f;
-		}
-		// Use a rough guess-timate of focal length
-		if (fx_undefined)
-		{
-			fx = 500 * (grayscale_image.cols / 640.0);
-			fy = 500 * (grayscale_image.rows / 480.0);
-
-			fx = (fx + fy) / 2.0;
-			fy = fx;
-		}
-
-
-		// if no pose defined we just use a face detector
-		if(bounding_boxes.empty())
-		{
 
 		// Detect faces in an image
 		vector<cv::Rect_<double> > face_detections;
 
-			if(det_parameters.curr_face_detector == LandmarkDetector::FaceModelParameters::HOG_SVM_DETECTOR)
+		if (image_reader.has_bounding_boxes)
+		{
+			face_detections = image_reader.GetBoundingBoxes();
+		}
+		else
+		{
+			if (det_parameters.curr_face_detector == LandmarkDetector::FaceModelParameters::HOG_SVM_DETECTOR)
 			{
 				vector<double> confidences;
 				LandmarkDetector::DetectFacesHOG(face_detections, grayscale_image, face_detector_hog, confidences);
@@ -411,199 +153,68 @@ int main (int argc, char **argv)
 			{
 				LandmarkDetector::DetectFaces(face_detections, grayscale_image, classifier);
 			}
+		}
 
 		// Detect landmarks around detected faces
 		int face_det = 0;
 		// perform landmark detection for every face detected
-			for(size_t face=0; face < face_detections.size(); ++face)
+		for (size_t face = 0; face < face_detections.size(); ++face)
 		{
 			// if there are multiple detections go through them
-				bool success = LandmarkDetector::DetectLandmarksInImage(grayscale_image, face_detections[face], clnf_model, det_parameters);
+			bool success = LandmarkDetector::DetectLandmarksInImage(grayscale_image, face_detections[face], face_model, det_parameters);
 
 			// Estimate head pose and eye gaze				
-				cv::Vec6d headPose = LandmarkDetector::GetPose(clnf_model, fx, fy, cx, cy);
+			cv::Vec6d pose_estimate = LandmarkDetector::GetPose(face_model, image_reader.fx, image_reader.fy, image_reader.cx, image_reader.cy);
 
 			// Gaze tracking, absolute gaze direction
-				cv::Point3f gazeDirection0(0, 0, -1);
+			cv::Point3f gaze_direction0(0, 0, -1);
-				cv::Point3f gazeDirection1(0, 0, -1);
+			cv::Point3f gaze_direction1(0, 0, -1);
-				cv::Vec2d gazeAngle(0, 0);
+			cv::Vec2d gaze_angle(0, 0);
 
-				if (success && det_parameters.track_gaze)
+			if (face_model.eye_model)
 			{
-					GazeAnalysis::EstimateGaze(clnf_model, gazeDirection0, fx, fy, cx, cy, true);
+				GazeAnalysis::EstimateGaze(face_model, gaze_direction0, image_reader.fx, image_reader.fy, image_reader.cx, image_reader.cy, true);
-					GazeAnalysis::EstimateGaze(clnf_model, gazeDirection1, fx, fy, cx, cy, false);
+				GazeAnalysis::EstimateGaze(face_model, gaze_direction1, image_reader.fx, image_reader.fy, image_reader.cx, image_reader.cy, false);
-					gazeAngle = GazeAnalysis::GetGazeAngle(gazeDirection0, gazeDirection1);
+				gaze_angle = GazeAnalysis::GetGazeAngle(gaze_direction0, gaze_direction1);
 			}
 
-				auto ActionUnits = face_analyser.PredictStaticAUs(read_image, clnf_model.detected_landmarks, false);
+			cv::Mat sim_warped_img;
+			cv::Mat_<double> hog_descriptor; int num_hog_rows = 0, num_hog_cols = 0;
 
-				// Writing out the detected landmarks (in an OS independent manner)
+			// Perform AU detection and HOG feature extraction, as this can be expensive only compute it if needed by output or visualization
-				if(!output_landmark_locations.empty())
+			if (recording_params.outputAlignedFaces() || recording_params.outputHOG() || recording_params.outputAUs() || visualizer.vis_align || visualizer.vis_hog)
 			{
-					char name[100];
+				face_analyser.PredictStaticAUsAndComputeFeatures(captured_image, face_model.detected_landmarks);
-					// append detection number (in case multiple faces are detected)
+				face_analyser.GetLatestAlignedFace(sim_warped_img);
-					sprintf(name, "_det_%d", face_det);
+				face_analyser.GetLatestHOG(hog_descriptor, num_hog_rows, num_hog_cols);
-
-					// Construct the output filename
-					boost::filesystem::path slash("/");
-					std::string preferredSlash = slash.make_preferred().string();
-
-					boost::filesystem::path out_feat_path(output_landmark_locations.at(i));
-					boost::filesystem::path dir = out_feat_path.parent_path();
-					boost::filesystem::path fname = out_feat_path.filename().replace_extension("");
-					boost::filesystem::path ext = out_feat_path.extension();
-					string outfeatures = dir.string() + preferredSlash + fname.string() + string(name) + ext.string();
-					write_out_landmarks(outfeatures, clnf_model, headPose, gazeDirection0, gazeDirection1, gazeAngle,  ActionUnits.first, ActionUnits.second, det_parameters.track_gaze);
 			}
 
-				if (!output_pose_locations.empty())
+			// Displaying the tracking visualizations
+			visualizer.SetObservationFaceAlign(sim_warped_img);
+			visualizer.SetObservationHOG(hog_descriptor, num_hog_rows, num_hog_cols);
+			visualizer.SetObservationLandmarks(face_model.detected_landmarks, 1.0, face_model.detection_success); // Set confidence to high to make sure we always visualize
+			visualizer.SetObservationPose(pose_estimate, 1.0);
+			visualizer.SetObservationGaze(gaze_direction0, gaze_direction1, LandmarkDetector::CalculateAllEyeLandmarks(face_model), LandmarkDetector::Calculate3DEyeLandmarks(face_model, image_reader.fx, image_reader.fy, image_reader.cx, image_reader.cy), face_model.detection_certainty);
+
+			// Setting up the recorder output
+			open_face_rec.SetObservationHOG(face_model.detection_success, hog_descriptor, num_hog_rows, num_hog_cols, 31); // The number of channels in HOG is fixed at the moment, as using FHOG
+			open_face_rec.SetObservationVisualization(visualizer.GetVisImage());
+			open_face_rec.SetObservationActionUnits(face_analyser.GetCurrentAUsReg(), face_analyser.GetCurrentAUsClass());
+			open_face_rec.SetObservationLandmarks(face_model.detected_landmarks, face_model.GetShape(image_reader.fx, image_reader.fy, image_reader.cx, image_reader.cy),
+				face_model.params_global, face_model.params_local, face_model.detection_certainty, face_model.detection_success);
+			open_face_rec.SetObservationPose(pose_estimate);
+			open_face_rec.SetObservationGaze(gaze_direction0, gaze_direction1, gaze_angle, LandmarkDetector::CalculateAllEyeLandmarks(face_model), LandmarkDetector::Calculate3DEyeLandmarks(face_model, image_reader.fx, image_reader.fy, image_reader.cx, image_reader.cy));
+			open_face_rec.SetObservationFaceAlign(sim_warped_img);
+			open_face_rec.WriteObservation();
+
+		}
+		if(face_detections.size() > 0)
 		{
-					char name[100];
+			visualizer.ShowObservation();
-					// append detection number (in case multiple faces are detected)
-					sprintf(name, "_det_%d", face_det);
-
-					// Construct the output filename
-					boost::filesystem::path slash("/");
-					std::string preferredSlash = slash.make_preferred().string();
-
-					boost::filesystem::path out_pose_path(output_pose_locations.at(i));
-					boost::filesystem::path dir = out_pose_path.parent_path();
-					boost::filesystem::path fname = out_pose_path.filename().replace_extension("");
-					boost::filesystem::path ext = out_pose_path.extension();
-					string outfeatures = dir.string() + preferredSlash + fname.string() + string(name) + ext.string();
-					write_out_pose_landmarks(outfeatures, clnf_model.GetShape(fx, fy, cx, cy), headPose, gazeDirection0, gazeDirection1);
-
 		}
 
-				if (det_parameters.track_gaze)
+		// Grabbing the next frame in the sequence
-				{
+		captured_image = image_reader.GetNextImage();
-					cv::Vec6d pose_estimate_to_draw = LandmarkDetector::GetPose(clnf_model, fx, fy, cx, cy);
-
-					// Draw it in reddish if uncertain, blueish if certain
-					LandmarkDetector::DrawBox(read_image, pose_estimate_to_draw, cv::Scalar(255.0, 0, 0), 3, fx, fy, cx, cy);
-					GazeAnalysis::DrawGaze(read_image, clnf_model, gazeDirection0, gazeDirection1, fx, fy, cx, cy);
-				}
-
-				// displaying detected landmarks
-				cv::Mat display_image;
-				create_display_image(read_image, display_image, clnf_model);
-
-				if(visualise && success)
-				{
-					imshow("colour", display_image);
-					cv::waitKey(1);
-				}
-
-				// Saving the display images (in an OS independent manner)
-				if(!output_images.empty() && success)
-				{
-					string outimage = output_images.at(i);
-					if(!outimage.empty())
-					{
-						char name[100];
-						sprintf(name, "_det_%d", face_det);
-
-						boost::filesystem::path slash("/");
-						std::string preferredSlash = slash.make_preferred().string();
-
-						// append detection number
-						boost::filesystem::path out_feat_path(outimage);
-						boost::filesystem::path dir = out_feat_path.parent_path();
-						boost::filesystem::path fname = out_feat_path.filename().replace_extension("");
-						boost::filesystem::path ext = out_feat_path.extension();
-						outimage = dir.string() + preferredSlash + fname.string() + string(name) + ext.string();
-						create_directory_from_file(outimage);
-						bool write_success = cv::imwrite(outimage, display_image);	
-						
-						if (!write_success)
-						{
-							cout << "Could not output a processed image" << endl;
-							return 1;
-						}
-
-					}
-
-				}
-
-				if(success)
-				{
-					face_det++;
-				}
-
-			}
-		}
-		else
-		{
-			// Have provided bounding boxes
-			LandmarkDetector::DetectLandmarksInImage(grayscale_image, bounding_boxes[i], clnf_model, det_parameters);
-
-			// Estimate head pose and eye gaze				
-			cv::Vec6d headPose = LandmarkDetector::GetPose(clnf_model, fx, fy, cx, cy);
-
-			// Gaze tracking, absolute gaze direction
-			cv::Point3f gazeDirection0(0, 0, -1);
-			cv::Point3f gazeDirection1(0, 0, -1);
-			cv::Vec2d gazeAngle(0, 0);
-
-			if (det_parameters.track_gaze)
-			{
-				GazeAnalysis::EstimateGaze(clnf_model, gazeDirection0, fx, fy, cx, cy, true);
-				GazeAnalysis::EstimateGaze(clnf_model, gazeDirection1, fx, fy, cx, cy, false);
-				gazeAngle = GazeAnalysis::GetGazeAngle(gazeDirection0, gazeDirection1);
-			}
-
-			auto ActionUnits = face_analyser.PredictStaticAUs(read_image, clnf_model.detected_landmarks, false);
-
-			// Writing out the detected landmarks
-			if(!output_landmark_locations.empty())
-			{
-				string outfeatures = output_landmark_locations.at(i);
-				write_out_landmarks(outfeatures, clnf_model, headPose, gazeDirection0, gazeDirection1, gazeAngle, ActionUnits.first, ActionUnits.second, det_parameters.track_gaze);
-			}
-
-			// Writing out the detected landmarks
-			if (!output_pose_locations.empty())
-			{
-				string outfeatures = output_pose_locations.at(i);
-				write_out_pose_landmarks(outfeatures, clnf_model.GetShape(fx, fy, cx, cy), headPose, gazeDirection0, gazeDirection1);
-			}
-
-			// displaying detected stuff
-			cv::Mat display_image;
-
-			if (det_parameters.track_gaze)
-			{
-				cv::Vec6d pose_estimate_to_draw = LandmarkDetector::GetPose(clnf_model, fx, fy, cx, cy);
-
-				// Draw it in reddish if uncertain, blueish if certain
-				LandmarkDetector::DrawBox(read_image, pose_estimate_to_draw, cv::Scalar(255.0, 0, 0), 3, fx, fy, cx, cy);
-				GazeAnalysis::DrawGaze(read_image, clnf_model, gazeDirection0, gazeDirection1, fx, fy, cx, cy);
-			}
-
-			create_display_image(read_image, display_image, clnf_model);
-
-			if(visualise)
-			{
-				imshow("colour", display_image);
-				cv::waitKey(1);
-			}
-
-			if(!output_images.empty())
-			{
-				string outimage = output_images.at(i);
-				if(!outimage.empty())
-				{
-					create_directory_from_file(outimage);
-					bool write_success = imwrite(outimage, display_image);	
-
-					if (!write_success)
-					{
-						cout << "Could not output a processed image" << endl;
-						return 1;
-					}
-				}
-			}
-		}				
 
 	}
 	

exe/FaceLandmarkImg/FaceLandmarkImg.vcxproj

@@ -112,7 +112,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <PreprocessorDefinitions>WIN32;_DEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
     </ClCompile>
@@ -127,7 +127,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <PreprocessorDefinitions>WIN64;_DEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
     </ClCompile>
@@ -144,7 +144,7 @@
       <FunctionLevelLinking>true</FunctionLevelLinking>
       <IntrinsicFunctions>true</IntrinsicFunctions>
       <PreprocessorDefinitions>WIN32;NDEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
@@ -162,12 +162,14 @@
       <PrecompiledHeader>NotUsing</PrecompiledHeader>
       <Optimization>Full</Optimization>
       <FunctionLevelLinking>true</FunctionLevelLinking>
-      <IntrinsicFunctions>true</IntrinsicFunctions>
+      <IntrinsicFunctions>false</IntrinsicFunctions>
       <PreprocessorDefinitions>WIN64;NDEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
+      <InlineFunctionExpansion>AnySuitable</InlineFunctionExpansion>
+      <FavorSizeOrSpeed>Speed</FavorSizeOrSpeed>
     </ClCompile>
     <Link>
       <SubSystem>Console</SubSystem>
@@ -189,6 +191,9 @@
     <ProjectReference Include="..\..\lib\local\LandmarkDetector\LandmarkDetector.vcxproj">
       <Project>{bdc1d107-de17-4705-8e7b-cdde8bfb2bf8}</Project>
     </ProjectReference>
+    <ProjectReference Include="..\..\lib\local\Utilities\Utilities.vcxproj">
+      <Project>{8e741ea2-9386-4cf2-815e-6f9b08991eac}</Project>
+    </ProjectReference>
   </ItemGroup>
   <Import Project="$(VCTargetsPath)\Microsoft.Cpp.targets" />
   <ImportGroup Label="ExtensionTargets">

exe/FaceLandmarkVid/CMakeLists.txt

@@ -9,10 +9,12 @@ include_directories(${LandmarkDetector_SOURCE_DIR}/include)
 include_directories(../../lib/local/LandmarkDetector/include)
 include_directories(../../lib/local/FaceAnalyser/include)		
 include_directories(../../lib/local/GazeAnalyser/include)		
+include_directories(../../lib/local/Utilities/include)		
 
 target_link_libraries(FaceLandmarkVid LandmarkDetector)
 target_link_libraries(FaceLandmarkVid FaceAnalyser)
 target_link_libraries(FaceLandmarkVid GazeAnalyser)
+target_link_libraries(FaceLandmarkVid Utilities)
 
 target_link_libraries(FaceLandmarkVid dlib)
 

exe/FaceLandmarkVid/FaceLandmarkVid.cpp

@@ -46,6 +46,10 @@
 #include <opencv2/imgproc.hpp>
 #include <opencv2/highgui/highgui.hpp>
 
+#include <SequenceCapture.h>
+#include <Visualizer.h>
+#include <VisualizationUtils.h>
+
 // Boost includes
 #include <filesystem.hpp>
 #include <filesystem/fstream.hpp>
@@ -82,276 +86,113 @@ vector<string> get_arguments(int argc, char **argv)
 	return arguments;
 }
 
-// Some globals for tracking timing information for visualisation
-double fps_tracker = -1.0;
-int64 t0 = 0;
-
-// Visualising the results
-void visualise_tracking(cv::Mat& captured_image, const LandmarkDetector::CLNF& face_model, const LandmarkDetector::FaceModelParameters& det_parameters, cv::Point3f gazeDirection0, cv::Point3f gazeDirection1, int frame_count, double fx, double fy, double cx, double cy)
-{
-
-	// Drawing the facial landmarks on the face and the bounding box around it if tracking is successful and initialised
-	double detection_certainty = face_model.detection_certainty;
-	bool detection_success = face_model.detection_success;
-
-	double visualisation_boundary = 0.2;
-
-	// Only draw if the reliability is reasonable, the value is slightly ad-hoc
-	if (detection_certainty < visualisation_boundary)
-	{
-		LandmarkDetector::Draw(captured_image, face_model);
-
-		double vis_certainty = detection_certainty;
-		if (vis_certainty > 1)
-			vis_certainty = 1;
-		if (vis_certainty < -1)
-			vis_certainty = -1;
-
-		vis_certainty = (vis_certainty + 1) / (visualisation_boundary + 1);
-
-		// A rough heuristic for box around the face width
-		int thickness = (int)std::ceil(2.0* ((double)captured_image.cols) / 640.0);
-
-		cv::Vec6d pose_estimate_to_draw = LandmarkDetector::GetPose(face_model, fx, fy, cx, cy);
-
-		// Draw it in reddish if uncertain, blueish if certain
-		LandmarkDetector::DrawBox(captured_image, pose_estimate_to_draw, cv::Scalar((1 - vis_certainty)*255.0, 0, vis_certainty * 255), thickness, fx, fy, cx, cy);
-		
-		if (det_parameters.track_gaze && detection_success && face_model.eye_model)
-		{
-			GazeAnalysis::DrawGaze(captured_image, face_model, gazeDirection0, gazeDirection1, fx, fy, cx, cy);
-		}
-	}
-
-	// Work out the framerate
-	if (frame_count % 10 == 0)
-	{
-		double t1 = cv::getTickCount();
-		fps_tracker = 10.0 / (double(t1 - t0) / cv::getTickFrequency());
-		t0 = t1;
-	}
-
-	// Write out the framerate on the image before displaying it
-	char fpsC[255];
-	std::sprintf(fpsC, "%d", (int)fps_tracker);
-	string fpsSt("FPS:");
-	fpsSt += fpsC;
-	cv::putText(captured_image, fpsSt, cv::Point(10, 20), CV_FONT_HERSHEY_SIMPLEX, 0.5, CV_RGB(255, 0, 0));
-
-	if (!det_parameters.quiet_mode)
-	{
-		cv::namedWindow("tracking_result", 1);
-		cv::imshow("tracking_result", captured_image);
-	}
-}
-
 int main (int argc, char **argv)
 {
 
 	vector<string> arguments = get_arguments(argc, argv);
 
-	// Some initial parameters that can be overriden from command line	
-	vector<string> files, output_video_files, out_dummy;
-	
-	// By default try webcam 0
-	int device = 0;
-
 	LandmarkDetector::FaceModelParameters det_parameters(arguments);
 
-	// Get the input output file parameters
-	
-	// Indicates that rotation should be with respect to world or camera coordinates
-	string output_codec;
-	LandmarkDetector::get_video_input_output_params(files, out_dummy, output_video_files, output_codec, arguments);
-	
 	// The modules that are being used for tracking
-	LandmarkDetector::CLNF clnf_model(det_parameters.model_location);	
+	LandmarkDetector::CLNF face_model(det_parameters.model_location);
 
-	// Grab camera parameters, if they are not defined (approximate values will be used)
+	// Open a sequence
-	float fx = 0, fy = 0, cx = 0, cy = 0;
+	Utilities::SequenceCapture sequence_reader;
-	// Get camera parameters
-	LandmarkDetector::get_camera_params(device, fx, fy, cx, cy, arguments);
 
-	// If cx (optical axis centre) is undefined will use the image size/2 as an estimate
+	// A utility for visualizing the results (show just the tracks)
-	bool cx_undefined = false;
+	Utilities::Visualizer visualizer(true, false, false);
-	bool fx_undefined = false;
+
-	if (cx == 0 || cy == 0)
+	// Tracking FPS for visualization
+	Utilities::FpsTracker fps_tracker;
+	fps_tracker.AddFrame();
+
+	int sequence_number = 0;
+
+	while (true) // this is not a for loop as we might also be reading from a webcam
 	{
-		cx_undefined = true;
+
+		// The sequence reader chooses what to open based on command line arguments provided
+		if(!sequence_reader.Open(arguments))
+		{
+			// If failed to open because no input files specified, attempt to open a webcam
+			if (sequence_reader.no_input_specified && sequence_number == 0)
+			{
+				// If that fails, revert to webcam
+				INFO_STREAM("No input specified, attempting to open a webcam 0");
+				if (!sequence_reader.OpenWebcam(0))
+				{
+					ERROR_STREAM("Failed to open the webcam");
+					break;
 				}
-	if (fx == 0 || fy == 0)
-	{
-		fx_undefined = true;
-	}
-
-	// If multiple video files are tracked, use this to indicate if we are done
-	bool done = false;	
-	int f_n = -1;
-	
-	det_parameters.track_gaze = true;
-
-	while(!done) // this is not a for loop as we might also be reading from a webcam
-	{
-		
-		string current_file;
-
-		// We might specify multiple video files as arguments
-		if(files.size() > 0)
-		{
-			f_n++;			
-		    current_file = files[f_n];
 			}
 			else
 			{
-			// If we want to write out from webcam
+				ERROR_STREAM("Failed to open a sequence");
-			f_n = 0;
+				break;
-		}
-		
-		// Do some grabbing
-		cv::VideoCapture video_capture;
-		if( current_file.size() > 0 )
-		{
-			if (!boost::filesystem::exists(current_file))
-			{
-				FATAL_STREAM("File does not exist");
-				return 1;
-			}
-
-			current_file = boost::filesystem::path(current_file).generic_string();
-
-			INFO_STREAM( "Attempting to read from file: " << current_file );
-			video_capture = cv::VideoCapture( current_file );
-		}
-		else
-		{
-			INFO_STREAM( "Attempting to capture from device: " << device );
-			video_capture = cv::VideoCapture( device );
-
-			// Read a first frame often empty in camera
-			cv::Mat captured_image;
-			video_capture >> captured_image;
-		}
-
-		if (!video_capture.isOpened())
-		{
-			FATAL_STREAM("Failed to open video source");
-			return 1;
-		}
-		else INFO_STREAM( "Device or file opened");
-
-		cv::Mat captured_image;
-		video_capture >> captured_image;		
-
-		// If optical centers are not defined just use center of image
-		if (cx_undefined)
-		{
-			cx = captured_image.cols / 2.0f;
-			cy = captured_image.rows / 2.0f;
-		}
-		// Use a rough guess-timate of focal length
-		if (fx_undefined)
-		{
-			fx = 500 * (captured_image.cols / 640.0);
-			fy = 500 * (captured_image.rows / 480.0);
-
-			fx = (fx + fy) / 2.0;
-			fy = fx;
-		}		
-	
-		int frame_count = 0;
-		
-		// saving the videos
-		cv::VideoWriter writerFace;
-		if (!output_video_files.empty())
-		{
-			try
- 			{
-				writerFace = cv::VideoWriter(output_video_files[f_n], CV_FOURCC(output_codec[0], output_codec[1], output_codec[2], output_codec[3]), 30, captured_image.size(), true);
-			}
-			catch(cv::Exception e)
-			{
-				WARN_STREAM( "Could not open VideoWriter, OUTPUT FILE WILL NOT BE WRITTEN. Currently using codec " << output_codec << ", try using an other one (-oc option)");
 			}
 		}
+		INFO_STREAM("Device or file opened");
 
-		// Use for timestamping if using a webcam
+		cv::Mat captured_image = sequence_reader.GetNextFrame();
-		int64 t_initial = cv::getTickCount();
 
-		INFO_STREAM( "Starting tracking");
+		INFO_STREAM("Starting tracking");
-		while(!captured_image.empty())
+		while (!captured_image.empty()) // this is not a for loop as we might also be reading from a webcam
 		{
 
 			// Reading the images
-			cv::Mat_<uchar> grayscale_image;
+			cv::Mat_<uchar> grayscale_image = sequence_reader.GetGrayFrame();
-
-			if(captured_image.channels() == 3)
-			{
-				cv::cvtColor(captured_image, grayscale_image, CV_BGR2GRAY);				
-			}
-			else
-			{
-				grayscale_image = captured_image.clone();				
-			}
 
 			// The actual facial landmark detection / tracking
-			bool detection_success = LandmarkDetector::DetectLandmarksInVideo(grayscale_image, clnf_model, det_parameters);
+			bool detection_success = LandmarkDetector::DetectLandmarksInVideo(grayscale_image, face_model, det_parameters);
-			
-			// Visualising the results
-			// Drawing the facial landmarks on the face and the bounding box around it if tracking is successful and initialised
-			double detection_certainty = clnf_model.detection_certainty;
 
 			// Gaze tracking, absolute gaze direction
 			cv::Point3f gazeDirection0(0, 0, -1);
 			cv::Point3f gazeDirection1(0, 0, -1);
 
-			if (det_parameters.track_gaze && detection_success && clnf_model.eye_model)
+			// If tracking succeeded and we have an eye model, estimate gaze
+			if (detection_success && face_model.eye_model)
 			{
-				GazeAnalysis::EstimateGaze(clnf_model, gazeDirection0, fx, fy, cx, cy, true);
+				GazeAnalysis::EstimateGaze(face_model, gazeDirection0, sequence_reader.fx, sequence_reader.fy, sequence_reader.cx, sequence_reader.cy, true);
-				GazeAnalysis::EstimateGaze(clnf_model, gazeDirection1, fx, fy, cx, cy, false);
+				GazeAnalysis::EstimateGaze(face_model, gazeDirection1, sequence_reader.fx, sequence_reader.fy, sequence_reader.cx, sequence_reader.cy, false);
 			}
 
-			visualise_tracking(captured_image, clnf_model, det_parameters, gazeDirection0, gazeDirection1, frame_count, fx, fy, cx, cy);
+			// Work out the pose of the head from the tracked model
+			cv::Vec6d pose_estimate = LandmarkDetector::GetPose(face_model, sequence_reader.fx, sequence_reader.fy, sequence_reader.cx, sequence_reader.cy);
 
-			// output the tracked video
+			// Keeping track of FPS
-			if (!output_video_files.empty())
+			fps_tracker.AddFrame();
-			{
-				writerFace << captured_image;
-			}
 
-
+			// Displaying the tracking visualizations
-			video_capture >> captured_image;
+			visualizer.SetImage(captured_image, sequence_reader.fx, sequence_reader.fy, sequence_reader.cx, sequence_reader.cy);
-		
+			visualizer.SetObservationLandmarks(face_model.detected_landmarks, face_model.detection_certainty, detection_success);
-			// detect key presses
+			visualizer.SetObservationPose(pose_estimate, face_model.detection_certainty);
-			char character_press = cv::waitKey(1);
+			visualizer.SetObservationGaze(gazeDirection0, gazeDirection1, LandmarkDetector::CalculateAllEyeLandmarks(face_model), LandmarkDetector::Calculate3DEyeLandmarks(face_model, sequence_reader.fx, sequence_reader.fy, sequence_reader.cx, sequence_reader.cy), face_model.detection_certainty);
+			visualizer.SetFps(fps_tracker.GetFPS());
+			// detect key presses (due to pecularities of OpenCV, you can get it when displaying images)
+			char character_press = visualizer.ShowObservation();
 
 			// restart the tracker
-			if(character_press == 'r')
+			if (character_press == 'r')
 			{
-				clnf_model.Reset();
+				face_model.Reset();
 			}
 			// quit the application
-			else if(character_press=='q')
+			else if (character_press == 'q')
 			{
 				return(0);
 			}
 
-			// Update the frame count
+			// Grabbing the next frame in the sequence
-			frame_count++;
+			captured_image = sequence_reader.GetNextFrame();
 
 		}
 		
-		frame_count = 0;
-
 		// Reset the model, for the next video
-		clnf_model.Reset();
+		face_model.Reset();
 
-		// break out of the loop if done with all the files (or using a webcam)
+		sequence_number++;
-		if(f_n == files.size() -1 || files.empty())
-		{
-			done = true;
-		}
-	}
 
+	}
 	return 0;
 }
 

exe/FaceLandmarkVid/FaceLandmarkVid.vcxproj

@@ -112,7 +112,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <PreprocessorDefinitions>WIN32;_DEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
@@ -128,7 +128,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <PreprocessorDefinitions>WIN64;_DEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
@@ -147,7 +147,7 @@
       </FunctionLevelLinking>
       <IntrinsicFunctions>true</IntrinsicFunctions>
       <PreprocessorDefinitions>WIN32;NDEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <FavorSizeOrSpeed>Speed</FavorSizeOrSpeed>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
@@ -164,16 +164,17 @@
     <ClCompile>
       <WarningLevel>Level3</WarningLevel>
       <PrecompiledHeader>NotUsing</PrecompiledHeader>
-      <Optimization>MaxSpeed</Optimization>
+      <Optimization>Full</Optimization>
       <FunctionLevelLinking>
       </FunctionLevelLinking>
-      <IntrinsicFunctions>true</IntrinsicFunctions>
+      <IntrinsicFunctions>false</IntrinsicFunctions>
       <PreprocessorDefinitions>WIN64;NDEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <FavorSizeOrSpeed>Speed</FavorSizeOrSpeed>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
+      <InlineFunctionExpansion>AnySuitable</InlineFunctionExpansion>
     </ClCompile>
     <Link>
       <SubSystem>Console</SubSystem>
@@ -195,6 +196,9 @@
     <ProjectReference Include="..\..\lib\local\LandmarkDetector\LandmarkDetector.vcxproj">
       <Project>{bdc1d107-de17-4705-8e7b-cdde8bfb2bf8}</Project>
     </ProjectReference>
+    <ProjectReference Include="..\..\lib\local\Utilities\Utilities.vcxproj">
+      <Project>{8e741ea2-9386-4cf2-815e-6f9b08991eac}</Project>
+    </ProjectReference>
   </ItemGroup>
   <Import Project="$(VCTargetsPath)\Microsoft.Cpp.targets" />
   <ImportGroup Label="ExtensionTargets">

exe/FaceLandmarkVidMulti/CMakeLists.txt

@@ -5,9 +5,11 @@ include_directories(${TBB_ROOT_DIR}/include)
 include_directories(${LandmarkDetector_SOURCE_DIR}/include)
 	
 include_directories(../../lib/local/LandmarkDetector/include)
+include_directories(../../lib/local/Utilities/include)
 			
 add_executable(FaceLandmarkVidMulti FaceLandmarkVidMulti.cpp)
 target_link_libraries(FaceLandmarkVidMulti LandmarkDetector)
+target_link_libraries(FaceLandmarkVidMulti Utilities)
 target_link_libraries(FaceLandmarkVidMulti dlib)
 
 target_link_libraries(FaceLandmarkVidMulti ${OpenCV_LIBS} ${Boost_LIBRARIES} ${TBB_LIBRARIES} ${BLAS_LIBRARIES})

exe/FaceLandmarkVidMulti/FaceLandmarkVidMulti.cpp

@@ -36,6 +36,10 @@
 // FaceTrackingVidMulti.cpp : Defines the entry point for the multiple face tracking console application.
 #include "LandmarkCoreIncludes.h"
 
+#include "VisualizationUtils.h"
+#include "Visualizer.h"
+#include "SequenceCapture.h"
+
 #include <fstream>
 #include <sstream>
 
@@ -106,17 +110,8 @@ int main (int argc, char **argv)
 
 	vector<string> arguments = get_arguments(argc, argv);
 
-	// Some initial parameters that can be overriden from command line	
-	vector<string> files, tracked_videos_output, dummy_out;
-	
-	// By default try webcam 0
-	int device = 0;
-
-	// cx and cy aren't necessarilly in the image center, so need to be able to override it (start with unit vals and init them if none specified)
-    float fx = 600, fy = 600, cx = 0, cy = 0;
 			
 	LandmarkDetector::FaceModelParameters det_params(arguments);
-	det_params.use_face_template = true;
 	// This is so that the model would not try re-initialising itself
 	det_params.reinit_video_every = -1;
 
@@ -125,114 +120,69 @@ int main (int argc, char **argv)
 	vector<LandmarkDetector::FaceModelParameters> det_parameters;
 	det_parameters.push_back(det_params);
 	
-	// Get the input output file parameters
-	string output_codec;
-	LandmarkDetector::get_video_input_output_params(files, dummy_out, tracked_videos_output, output_codec, arguments);
-
-	// Get camera parameters
-	LandmarkDetector::get_camera_params(device, fx, fy, cx, cy, arguments);
-	
 	// The modules that are being used for tracking
-	vector<LandmarkDetector::CLNF> clnf_models;
+	vector<LandmarkDetector::CLNF> face_models;
 	vector<bool> active_models;
 
 	int num_faces_max = 4;
 
-	LandmarkDetector::CLNF clnf_model(det_parameters[0].model_location);
+	LandmarkDetector::CLNF face_model(det_parameters[0].model_location);
-	clnf_model.face_detector_HAAR.load(det_parameters[0].face_detector_location);
+	face_model.face_detector_HAAR.load(det_parameters[0].face_detector_location);
-	clnf_model.face_detector_location = det_parameters[0].face_detector_location;
+	face_model.face_detector_location = det_parameters[0].face_detector_location;
 	
-	clnf_models.reserve(num_faces_max);
+	face_models.reserve(num_faces_max);
 
-	clnf_models.push_back(clnf_model);
+	face_models.push_back(face_model);
 	active_models.push_back(false);
 
 	for (int i = 1; i < num_faces_max; ++i)
 	{
-		clnf_models.push_back(clnf_model);
+		face_models.push_back(face_model);
 		active_models.push_back(false);
 		det_parameters.push_back(det_params);
 	}
 	
-	// If multiple video files are tracked, use this to indicate if we are done
+	// Open a sequence
-	bool done = false;	
+	Utilities::SequenceCapture sequence_reader;
-	int f_n = -1;
 
-	// If cx (optical axis centre) is undefined will use the image size/2 as an estimate
+	// A utility for visualizing the results (show just the tracks)
-	bool cx_undefined = false;
+	Utilities::Visualizer visualizer(true, false, false);
-	if(cx == 0 || cy == 0)
+
+	// Tracking FPS for visualization
+	Utilities::FpsTracker fps_tracker;
+	fps_tracker.AddFrame();
+
+	int sequence_number = 0;
+
+	while(true) // this is not a for loop as we might also be reading from a webcam
 	{
-		cx_undefined = true;
+
+		// The sequence reader chooses what to open based on command line arguments provided
+		if (!sequence_reader.Open(arguments))
+		{
+			// If failed to open because no input files specified, attempt to open a webcam
+			if (sequence_reader.no_input_specified && sequence_number == 0)
+			{
+				// If that fails, revert to webcam
+				INFO_STREAM("No input specified, attempting to open a webcam 0");
+				if (!sequence_reader.OpenWebcam(0))
+				{
+					ERROR_STREAM("Failed to open the webcam");
+					break;
 				}
-	
-	while(!done) // this is not a for loop as we might also be reading from a webcam
-	{
-		
-		string current_file;
-
-		// We might specify multiple video files as arguments
-		if(files.size() > 0)
-		{
-			f_n++;			
-		    current_file = files[f_n];
-		}
-
-		// Do some grabbing
-		cv::VideoCapture video_capture;
-		if( current_file.size() > 0 )
-		{
-			INFO_STREAM( "Attempting to read from file: " << current_file );
-			video_capture = cv::VideoCapture( current_file );
 			}
 			else
 			{
-			INFO_STREAM( "Attempting to capture from device: " << device );
+				ERROR_STREAM("Failed to open a sequence");
-			video_capture = cv::VideoCapture( device );
+				break;
-
-			// Read a first frame often empty in camera
-			cv::Mat captured_image;
-			video_capture >> captured_image;
 			}
-
-		if (!video_capture.isOpened())
-		{
-			FATAL_STREAM("Failed to open video source");
-			return 1;
 		}
-		else INFO_STREAM( "Device or file opened");
+		INFO_STREAM("Device or file opened");
 
-		cv::Mat captured_image;
+		cv::Mat captured_image = sequence_reader.GetNextFrame();
-		video_capture >> captured_image;		
-		
-
-		// If optical centers are not defined just use center of image
-		if(cx_undefined)
-		{
-			cx = captured_image.cols / 2.0f;
-			cy = captured_image.rows / 2.0f;
-		}
 
 		int frame_count = 0;
 
-		// saving the videos
-		cv::VideoWriter writerFace;
-		if(!tracked_videos_output.empty())
-		{
-			try
-			{
-				writerFace = cv::VideoWriter(tracked_videos_output[f_n], CV_FOURCC(output_codec[0],output_codec[1],output_codec[2],output_codec[3]), 30, captured_image.size(), true);
-			}
-			catch(cv::Exception e)
-			{
-				WARN_STREAM( "Could not open VideoWriter, OUTPUT FILE WILL NOT BE WRITTEN. Currently using codec " << output_codec << ", try using an other one (-oc option)");
-			}
-		}
-		
-		// For measuring the timings
-		int64 t1,t0 = cv::getTickCount();
-		double fps = 10;
-
-
 		INFO_STREAM( "Starting tracking");
 		while(!captured_image.empty())
 		{		
@@ -254,7 +204,7 @@ int main (int argc, char **argv)
 			vector<cv::Rect_<double> > face_detections;
 
 			bool all_models_active = true;
-			for(unsigned int model = 0; model < clnf_models.size(); ++model)
+			for(unsigned int model = 0; model < face_models.size(); ++model)
 			{
 				if(!active_models[model])
 				{
@@ -268,33 +218,32 @@ int main (int argc, char **argv)
 				if(det_parameters[0].curr_face_detector == LandmarkDetector::FaceModelParameters::HOG_SVM_DETECTOR)
 				{
 					vector<double> confidences;
-					LandmarkDetector::DetectFacesHOG(face_detections, grayscale_image, clnf_models[0].face_detector_HOG, confidences);
+					LandmarkDetector::DetectFacesHOG(face_detections, grayscale_image, face_models[0].face_detector_HOG, confidences);
 				}
 				else
 				{
-					LandmarkDetector::DetectFaces(face_detections, grayscale_image, clnf_models[0].face_detector_HAAR);
+					LandmarkDetector::DetectFaces(face_detections, grayscale_image, face_models[0].face_detector_HAAR);
 				}
 
 			}
 
 			// Keep only non overlapping detections (also convert to a concurrent vector
-			NonOverlapingDetections(clnf_models, face_detections);
+			NonOverlapingDetections(face_models, face_detections);
 
 			vector<tbb::atomic<bool> > face_detections_used(face_detections.size());
 
 			// Go through every model and update the tracking
-			tbb::parallel_for(0, (int)clnf_models.size(), [&](int model){
+			tbb::parallel_for(0, (int)face_models.size(), [&](int model){
 			//for(unsigned int model = 0; model < clnf_models.size(); ++model)
 			//{
 
 				bool detection_success = false;
 
 				// If the current model has failed more than 4 times in a row, remove it
-				if(clnf_models[model].failures_in_a_row > 4)
+				if(face_models[model].failures_in_a_row > 4)
 				{				
 					active_models[model] = false;
-					clnf_models[model].Reset();
+					face_models[model].Reset();
-
 				}
 
 				// If the model is inactive reactivate it with new detections
@@ -308,11 +257,11 @@ int main (int argc, char **argv)
 						{
 					
 							// Reinitialise the model
-							clnf_models[model].Reset();
+							face_models[model].Reset();
 
 							// This ensures that a wider window is used for the initial landmark localisation
-							clnf_models[model].detection_success = false;
+							face_models[model].detection_success = false;
-							detection_success = LandmarkDetector::DetectLandmarksInVideo(grayscale_image, face_detections[detection_ind], clnf_models[model], det_parameters[model]);
+							detection_success = LandmarkDetector::DetectLandmarksInVideo(grayscale_image, face_detections[detection_ind], face_models[model], det_parameters[model]);
 													
 							// This activates the model
 							active_models[model] = true;
@@ -326,123 +275,64 @@ int main (int argc, char **argv)
 				else
 				{
 					// The actual facial landmark detection / tracking
-					detection_success = LandmarkDetector::DetectLandmarksInVideo(grayscale_image, clnf_models[model], det_parameters[model]);
+					detection_success = LandmarkDetector::DetectLandmarksInVideo(grayscale_image, face_models[model], det_parameters[model]);
 				}
 			});
 								
+			// Keeping track of FPS
+			fps_tracker.AddFrame();
+
+			visualizer.SetImage(captured_image, sequence_reader.fx, sequence_reader.fy, sequence_reader.cx, sequence_reader.cy);
+
 			// Go through every model and visualise the results
-			for(size_t model = 0; model < clnf_models.size(); ++model)
+			for(size_t model = 0; model < face_models.size(); ++model)
 			{
 				// Visualising the results
-				// Drawing the facial landmarks on the face and the bounding box around it if tracking is successful and initialised
+				if(active_models[model])
-				double detection_certainty = clnf_models[model].detection_certainty;
-
-				double visualisation_boundary = -0.1;
-			
-				// Only draw if the reliability is reasonable, the value is slightly ad-hoc
-				if(detection_certainty < visualisation_boundary)
 				{
-					LandmarkDetector::Draw(disp_image, clnf_models[model]);
+					visualizer.SetObservationLandmarks(face_models[model].detected_landmarks, face_models[model].detection_certainty, face_models[model].detection_success);
-
+					visualizer.SetObservationPose(LandmarkDetector::GetPose(face_models[model], sequence_reader.fx, sequence_reader.fy, sequence_reader.cx, sequence_reader.cy), face_models[model].detection_certainty);
-					if(detection_certainty > 1)
-						detection_certainty = 1;
-					if(detection_certainty < -1)
-						detection_certainty = -1;
-
-					detection_certainty = (detection_certainty + 1)/(visualisation_boundary +1);
-
-					// A rough heuristic for box around the face width
-					int thickness = (int)std::ceil(2.0* ((double)captured_image.cols) / 640.0);
-					
-					// Work out the pose of the head from the tracked model
-					cv::Vec6d pose_estimate = LandmarkDetector::GetPose(clnf_models[model], fx, fy, cx, cy);
-					
-					// Draw it in reddish if uncertain, blueish if certain
-					LandmarkDetector::DrawBox(disp_image, pose_estimate, cv::Scalar((1-detection_certainty)*255.0,0, detection_certainty*255), thickness, fx, fy, cx, cy);
 				}
 			}
+			visualizer.SetFps(fps_tracker.GetFPS());
 
-			// Work out the framerate
+			// show visualization and detect key presses
-			if(frame_count % 10 == 0)
+			char character_press = visualizer.ShowObservation();
-			{      
-				t1 = cv::getTickCount();
-				fps = 10.0 / (double(t1-t0)/cv::getTickFrequency()); 
-				t0 = t1;
-			}
-			
-			// Write out the framerate on the image before displaying it
-			char fpsC[255];
-			sprintf(fpsC, "%d", (int)fps);
-			string fpsSt("FPS:");
-			fpsSt += fpsC;
-			cv::putText(disp_image, fpsSt, cv::Point(10,20), CV_FONT_HERSHEY_SIMPLEX, 0.5, CV_RGB(255,0,0), 1, CV_AA);
-			
-			int num_active_models = 0;
-
-			for( size_t active_model = 0; active_model < active_models.size(); active_model++)
-			{
-				if(active_models[active_model])
-				{
-					num_active_models++;
-				}
-			}
-
-			char active_m_C[255];
-			sprintf(active_m_C, "%d", num_active_models);
-			string active_models_st("Active models:");
-			active_models_st += active_m_C;
-			cv::putText(disp_image, active_models_st, cv::Point(10,60), CV_FONT_HERSHEY_SIMPLEX, 0.5, CV_RGB(255,0,0), 1, CV_AA);
-			
-			if(!det_parameters[0].quiet_mode)
-			{
-				cv::namedWindow("tracking_result",1);
-				cv::imshow("tracking_result", disp_image);
-			}
-
-			// output the tracked video
-			if(!tracked_videos_output.empty())
-			{		
-				writerFace << disp_image;
-			}
-
-			video_capture >> captured_image;
-		
-			// detect key presses
-			char character_press = cv::waitKey(1);
 			
 			// restart the trackers
 			if(character_press == 'r')
 			{
-				for(size_t i=0; i < clnf_models.size(); ++i)
+				for(size_t i=0; i < face_models.size(); ++i)
 				{
-					clnf_models[i].Reset();
+					face_models[i].Reset();
 					active_models[i] = false;
 				}
 			}
 			// quit the application
 			else if(character_press=='q')
 			{
-				return(0);
+				return 0;
 			}
 
 			// Update the frame count
 			frame_count++;
+
+			// Grabbing the next frame in the sequence
+			captured_image = sequence_reader.GetNextFrame();
+
 		}
 		
 		frame_count = 0;
 
 		// Reset the model, for the next video
-		for(size_t model=0; model < clnf_models.size(); ++model)
+		for(size_t model=0; model < face_models.size(); ++model)
 		{
-			clnf_models[model].Reset();
+			face_models[model].Reset();
 			active_models[model] = false;
 		}
 
-		// break out of the loop if done with all the files
+		sequence_number++;
-		if(f_n == files.size() -1)
+
-		{
-			done = true;
-		}
 	}
 
 	return 0;

exe/FaceLandmarkVidMulti/FaceLandmarkVidMulti.vcxproj

@@ -105,7 +105,7 @@
     <ClCompile>
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
     </ClCompile>
@@ -117,7 +117,7 @@
     <ClCompile>
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
     </ClCompile>
@@ -131,7 +131,7 @@
       <Optimization>MaxSpeed</Optimization>
       <FunctionLevelLinking>true</FunctionLevelLinking>
       <IntrinsicFunctions>true</IntrinsicFunctions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
       <RuntimeLibrary>MultiThreadedDLL</RuntimeLibrary>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
@@ -145,13 +145,15 @@
   <ItemDefinitionGroup Condition="'$(Configuration)|$(Platform)'=='Release|x64'">
     <ClCompile>
       <WarningLevel>Level3</WarningLevel>
-      <Optimization>MaxSpeed</Optimization>
+      <Optimization>Full</Optimization>
       <FunctionLevelLinking>true</FunctionLevelLinking>
-      <IntrinsicFunctions>true</IntrinsicFunctions>
+      <IntrinsicFunctions>false</IntrinsicFunctions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <RuntimeLibrary>MultiThreadedDLL</RuntimeLibrary>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
+      <InlineFunctionExpansion>AnySuitable</InlineFunctionExpansion>
+      <FavorSizeOrSpeed>Speed</FavorSizeOrSpeed>
     </ClCompile>
     <Link>
       <GenerateDebugInformation>true</GenerateDebugInformation>
@@ -166,6 +168,9 @@
     <ProjectReference Include="..\..\lib\local\LandmarkDetector\LandmarkDetector.vcxproj">
       <Project>{bdc1d107-de17-4705-8e7b-cdde8bfb2bf8}</Project>
     </ProjectReference>
+    <ProjectReference Include="..\..\lib\local\Utilities\Utilities.vcxproj">
+      <Project>{8e741ea2-9386-4cf2-815e-6f9b08991eac}</Project>
+    </ProjectReference>
   </ItemGroup>
   <Import Project="$(VCTargetsPath)\Microsoft.Cpp.targets" />
   <ImportGroup Label="ExtensionTargets">

exe/FeatureExtraction/CMakeLists.txt

@@ -9,10 +9,12 @@ include_directories(${LandmarkDetector_SOURCE_DIR}/include)
 include_directories(../../lib/local/LandmarkDetector/include)
 include_directories(../../lib/local/FaceAnalyser/include)		
 include_directories(../../lib/local/GazeAnalyser/include)		
+include_directories(../../lib/local/Utilities/include)		
 
 target_link_libraries(FeatureExtraction LandmarkDetector)
 target_link_libraries(FeatureExtraction FaceAnalyser)
 target_link_libraries(FeatureExtraction GazeAnalyser)
+target_link_libraries(FeatureExtraction Utilities)
 target_link_libraries(FeatureExtraction dlib)
 
 target_link_libraries(FeatureExtraction ${OpenCV_LIBS} ${Boost_LIBRARIES} ${TBB_LIBRARIES} ${BLAS_LIBRARIES})

exe/FeatureExtraction/FeatureExtraction.vcxproj

@@ -111,7 +111,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <PreprocessorDefinitions>WIN32;_DEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
@@ -127,7 +127,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <PreprocessorDefinitions>WIN64;_DEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
@@ -145,7 +145,7 @@
       <FunctionLevelLinking>false</FunctionLevelLinking>
       <IntrinsicFunctions>true</IntrinsicFunctions>
       <PreprocessorDefinitions>WIN32;NDEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <FavorSizeOrSpeed>Speed</FavorSizeOrSpeed>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
@@ -163,16 +163,17 @@
     <ClCompile>
       <WarningLevel>Level3</WarningLevel>
       <PrecompiledHeader>NotUsing</PrecompiledHeader>
-      <Optimization>MaxSpeed</Optimization>
+      <Optimization>Full</Optimization>
       <FunctionLevelLinking>false</FunctionLevelLinking>
-      <IntrinsicFunctions>true</IntrinsicFunctions>
+      <IntrinsicFunctions>false</IntrinsicFunctions>
       <PreprocessorDefinitions>WIN64;NDEBUG;_CONSOLE;%(PreprocessorDefinitions)</PreprocessorDefinitions>
-      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\GazeAnalyser\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>$(SolutionDir)\lib\local\FaceAnalyser\include;$(SolutionDir)\lib\local\LandmarkDetector\include;$(SolutionDir)\lib\local\GazeAnalyser\include;$(SolutionDir)\lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <OpenMPSupport>false</OpenMPSupport>
       <FavorSizeOrSpeed>Speed</FavorSizeOrSpeed>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <RuntimeLibrary>MultiThreadedDLL</RuntimeLibrary>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
+      <InlineFunctionExpansion>AnySuitable</InlineFunctionExpansion>
     </ClCompile>
     <Link>
       <SubSystem>Console</SubSystem>
@@ -194,6 +195,9 @@
     <ProjectReference Include="..\..\lib\local\LandmarkDetector\LandmarkDetector.vcxproj">
       <Project>{bdc1d107-de17-4705-8e7b-cdde8bfb2bf8}</Project>
     </ProjectReference>
+    <ProjectReference Include="..\..\lib\local\Utilities\Utilities.vcxproj">
+      <Project>{8e741ea2-9386-4cf2-815e-6f9b08991eac}</Project>
+    </ProjectReference>
   </ItemGroup>
   <Import Project="$(VCTargetsPath)\Microsoft.Cpp.targets" />
   <ImportGroup Label="ExtensionTargets">

exe/Recording/Recording.vcxproj

@@ -86,6 +86,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
+      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
     </ClCompile>
     <Link>
       <GenerateDebugInformation>true</GenerateDebugInformation>
@@ -110,6 +111,7 @@
       <OpenMPSupport>false</OpenMPSupport>
       <CallingConvention>Cdecl</CallingConvention>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
+      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
     </ClCompile>
     <Link>
       <GenerateDebugInformation>true</GenerateDebugInformation>
@@ -128,6 +130,7 @@
       <OpenMPSupport>false</OpenMPSupport>
       <CallingConvention>Cdecl</CallingConvention>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
+      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
     </ClCompile>
     <Link>
       <GenerateDebugInformation>true</GenerateDebugInformation>

exe/releases/package_windows_executables.m

@@ -0,0 +1,78 @@
+clear;
+version = '0.3.0';
+
+out_x86 = sprintf('OpenFace_%s_win_x86', version);
+out_x64 = sprintf('OpenFace_%s_win_x64', version);
+
+mkdir(out_x86);
+mkdir(out_x64);
+
+in_x86 = '../../Release/';
+in_x64 = '../../x64/Release/';
+
+% Copy models
+copyfile([in_x86, 'AU_predictors'], [out_x86, '/AU_predictors'])
+copyfile([in_x86, 'classifiers'], [out_x86, '/classifiers'])
+copyfile([in_x86, 'model'], [out_x86, '/model'])
+
+copyfile([in_x64, 'AU_predictors'], [out_x64, '/AU_predictors'])
+copyfile([in_x64, 'classifiers'], [out_x64, '/classifiers'])
+copyfile([in_x64, 'model'], [out_x64, '/model'])
+
+%% Copy libraries
+libs_x86 = dir([in_x86, '*.lib'])';
+
+for lib = libs_x86
+   
+    copyfile([in_x86, '/', lib.name], [out_x86, '/', lib.name])
+    
+end
+
+libs_x64 = dir([in_x64, '*.lib'])';
+
+for lib = libs_x64
+   
+    copyfile([in_x64, '/', lib.name], [out_x64, '/', lib.name])
+    
+end
+
+%% Copy dlls
+dlls_x86 = dir([in_x86, '*.dll'])';
+
+for dll = dlls_x86
+   
+    copyfile([in_x86, '/', dll.name], [out_x86, '/', dll.name])
+    
+end
+
+dlls_x64 = dir([in_x64, '*.dll'])';
+
+for dll = dlls_x64
+   
+    copyfile([in_x64, '/', dll.name], [out_x64, '/', dll.name])
+    
+end
+
+%% Copy exe's
+exes_x86 = dir([in_x86, '*.exe'])';
+
+for exe = exes_x86
+   
+    copyfile([in_x86, '/', exe.name], [out_x86, '/', exe.name])
+    
+end
+
+exes_x64 = dir([in_x64, '*.exe'])';
+
+for exe = exes_x64
+   
+    copyfile([in_x64, '/', exe.name], [out_x64, '/', exe.name])
+    
+end
+
+%% Copy license and copyright
+copyfile('../../Copyright.txt', [out_x86, '/Copyright.txt']);
+copyfile('../../OpenFace-license.txt', [out_x86, '/OpenFace-license.txt']);
+
+copyfile('../../Copyright.txt', [out_x64, '/Copyright.txt']);
+copyfile('../../OpenFace-license.txt', [out_x64, '/OpenFace-license.txt']);

lib/local/CppInerop/FaceAnalyserInterop.h

@@ -187,7 +187,7 @@ public:
 		face_analyser->PostprocessOutputFile(msclr::interop::marshal_as<std::string>(file));
 	}
 
-	void AddNextFrame(OpenCVWrappers::RawImage^ frame, List<System::Tuple<double, double>^>^ landmarks, bool success, bool online, bool vis_hog) {
+	void AddNextFrame(OpenCVWrappers::RawImage^ frame, List<System::Tuple<double, double>^>^ landmarks, bool success, bool online) {
 			
 		// Construct an OpenCV matric from the landmarks
 		cv::Mat_<double> landmarks_mat(landmarks->Count * 2, 1, 0.0);
@@ -197,7 +197,9 @@ public:
 			landmarks_mat.at<double>(i + landmarks->Count, 0) = landmarks[i]->Item2;
 		}
 
-		face_analyser->AddNextFrame(frame->Mat, landmarks_mat, success, 0, online, vis_hog);
+		//(captured_image, face_model.detected_landmarks, face_model.detection_success, sequence_reader.time_stamp, sequence_reader.IsWebcam());
+
+		face_analyser->AddNextFrame(frame->Mat, landmarks_mat, success, 0, online);
 
 		face_analyser->GetLatestHOG(*hog_features, *num_rows, *num_cols);
 		

lib/local/CppInerop/LandmarkDetectorInterop.h

@@ -97,7 +97,6 @@ namespace CppInterop {
 					params->model_location = "model/main_clnf_demos.txt";
 				}
 
-				params->track_gaze = true;
 			}
 
 			// TODO this could have optimize for demo mode (also could appropriately update sigma, reg_factor as well)

lib/local/FaceAnalyser/CMakeLists.txt

@@ -10,6 +10,9 @@ include_directories(../../3rdParty/OpenBLAS/include)
 #LandmarkDetector library
 include_directories(../../local/LandmarkDetector/include)
 
+#Utilities library
+include_directories(../../local/Utilities/include)
+
 SET(SOURCE
     src/Face_utils.cpp
 	src/FaceAnalyser.cpp

lib/local/FaceAnalyser/FaceAnalyser.vcxproj

@@ -98,7 +98,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <SDLCheck>false</SDLCheck>
-      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;$(SolutionDir)lib\local\LandmarkDetector\include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
     </ClCompile>
@@ -117,10 +117,9 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <SDLCheck>false</SDLCheck>
-      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;$(SolutionDir)lib\local\LandmarkDetector\include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
-      <PreprocessorDefinitions>WIN64;_DEBUG;_LIB;EIGEN_MPL2_ONLY;%(PreprocessorDefinitions)</PreprocessorDefinitions>
     </ClCompile>
     <Link>
       <GenerateDebugInformation>true</GenerateDebugInformation>
@@ -140,7 +139,7 @@
       <IntrinsicFunctions>true</IntrinsicFunctions>
       <SDLCheck>
       </SDLCheck>
-      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;$(SolutionDir)lib\local\LandmarkDetector\include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
     </ClCompile>
@@ -160,15 +159,16 @@
   <ItemDefinitionGroup Condition="'$(Configuration)|$(Platform)'=='Release|x64'">
     <ClCompile>
       <WarningLevel>Level3</WarningLevel>
-      <Optimization>MaxSpeed</Optimization>
+      <Optimization>Full</Optimization>
       <FunctionLevelLinking>true</FunctionLevelLinking>
-      <IntrinsicFunctions>true</IntrinsicFunctions>
+      <IntrinsicFunctions>false</IntrinsicFunctions>
       <SDLCheck>
       </SDLCheck>
-      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;$(SolutionDir)lib\local\LandmarkDetector\include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
-      <PreprocessorDefinitions>WIN64;NDEBUG;_LIB;%(PreprocessorDefinitions)</PreprocessorDefinitions>
+      <InlineFunctionExpansion>AnySuitable</InlineFunctionExpansion>
+      <FavorSizeOrSpeed>Speed</FavorSizeOrSpeed>
     </ClCompile>
     <Link>
       <GenerateDebugInformation>true</GenerateDebugInformation>
@@ -187,6 +187,9 @@
     <ProjectReference Include="..\..\3rdParty\dlib\dlib.vcxproj">
       <Project>{b47a5f12-2567-44e9-ae49-35763ec82149}</Project>
     </ProjectReference>
+    <ProjectReference Include="..\LandmarkDetector\LandmarkDetector.vcxproj">
+      <Project>{bdc1d107-de17-4705-8e7b-cdde8bfb2bf8}</Project>
+    </ProjectReference>
   </ItemGroup>
   <ItemGroup>
     <ClCompile Include="src\FaceAnalyserParameters.cpp" />

lib/local/FaceAnalyser/include/FaceAnalyser.h

@@ -64,9 +64,7 @@ public:
 	// Constructor for FaceAnalyser using the parameters structure
 	FaceAnalyser(const FaceAnalysis::FaceAnalyserParameters& face_analyser_params);
 
-	void AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& detected_landmarks, bool success, double timestamp_seconds, bool online = false, bool visualise = true);
+	void AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& detected_landmarks, bool success, double timestamp_seconds, bool online = false);
-
-	cv::Mat GetLatestHOGDescriptorVisualisation();
 
 	double GetCurrentTimeSeconds();
 	
@@ -75,9 +73,8 @@ public:
 	std::vector<std::pair<std::string, double>> GetCurrentAUsReg() const;   // AU intensity
 	std::vector<std::pair<std::string, double>> GetCurrentAUsCombined() const; // Both presense and intensity
 
-	// A standalone call for predicting AUs from a static image, the first element in the pair represents occurence the second intensity
+	// A standalone call for predicting AUs and computing face texture features from a static image
-	// This call is useful for detecting action units in images
+	void PredictStaticAUsAndComputeFeatures(const cv::Mat& frame, const cv::Mat_<float>& detected_landmarks);
-	std::pair<std::vector<std::pair<std::string, double>>, std::vector<std::pair<std::string, double>>> PredictStaticAUs(const cv::Mat& frame, const cv::Mat_<float>& detected_landmarks, bool visualise = true);
 
 	void Reset();
 
@@ -132,7 +129,6 @@ private:
 	// Cache of intermediate images
 	cv::Mat aligned_face_for_au;
 	cv::Mat aligned_face_for_output;
-	cv::Mat hog_descriptor_visualisation;
 	bool out_grayscale;
 
 	// Private members to be used for predictions

lib/local/FaceAnalyser/include/Face_utils.h

@@ -52,8 +52,6 @@ namespace FaceAnalysis
 
 	void Extract_FHOG_descriptor(cv::Mat_<double>& descriptor, const cv::Mat& image, int& num_rows, int& num_cols, int cell_size = 8);
 
-	void Visualise_FHOG(const cv::Mat_<double>& descriptor, int num_rows, int num_cols, cv::Mat& visualisation);
-
 	// The following two methods go hand in hand
 	void ExtractSummaryStatistics(const cv::Mat_<double>& descriptors, cv::Mat_<double>& sum_stats, bool mean, bool stdev, bool max_min);
 	void AddDescriptor(cv::Mat_<double>& descriptors, cv::Mat_<double> new_descriptor, int curr_frame, int num_frames_to_keep = 120);
@@ -70,26 +68,10 @@ namespace FaceAnalysis
 	cv::Matx22f AlignShapesWithScale(cv::Mat_<float>& src, cv::Mat_<float> dst);
 
 	//===========================================================================
-	// Visualisation functions
+	// Visualisation functions, TODO move
 	//===========================================================================
 	void Project(cv::Mat_<float>& dest, const cv::Mat_<float>& mesh, float fx, float fy, float cx, float cy);
 
-	//===========================================================================
-	// Angle representation conversion helpers
-	//===========================================================================
-	cv::Matx33f Euler2RotationMatrix(const cv::Vec3f& eulerAngles);
-	
-	// Using the XYZ convention R = Rx * Ry * Rz, left-handed positive sign
-	cv::Vec3f RotationMatrix2Euler(const cv::Matx33f& rotation_matrix);
-
-	cv::Vec3f Euler2AxisAngle(const cv::Vec3f& euler);
-
-	cv::Vec3f AxisAngle2Euler(const cv::Vec3f& axis_angle);
-
-	cv::Matx33f AxisAngle2RotationMatrix(const cv::Vec3f& axis_angle);
-
-	cv::Vec3f RotationMatrix2AxisAngle(const cv::Matx33f& rotation_matrix);
-
 	//============================================================================
 	// Matrix reading functionality
 	//============================================================================

lib/local/FaceAnalyser/src/FaceAnalyser.cpp

@@ -248,7 +248,7 @@ int GetViewId(const vector<cv::Vec3d> orientations_all, const cv::Vec3d& orienta
 	
 }
 
-std::pair<std::vector<std::pair<string, double>>, std::vector<std::pair<string, double>>> FaceAnalyser::PredictStaticAUs(const cv::Mat& frame, const cv::Mat_<float>& detected_landmarks, bool visualise)
+void FaceAnalyser::PredictStaticAUsAndComputeFeatures(const cv::Mat& frame, const cv::Mat_<float>& detected_landmarks)
 {
 	
 	// Extract shape parameters from the detected landmarks
@@ -259,6 +259,16 @@ std::pair<std::vector<std::pair<string, double>>, std::vector<std::pair<string,
 	// First align the face
 	AlignFaceMask(aligned_face_for_au, frame, detected_landmarks, params_global, pdm, triangulation, true, 0.7, 112, 112);
 	
+	// If the output requirement matches use the already computed one, else compute it again
+	if (align_scale_out == align_scale_au && align_width_out == align_width_au && align_height_out == align_height_au)
+	{
+		aligned_face_for_output = aligned_face_for_au.clone();
+	}
+	else
+	{
+		AlignFaceMask(aligned_face_for_output, frame, detected_landmarks, params_global, pdm, triangulation, true, align_scale_out, align_width_out, align_height_out);
+	}
+
 	// Extract HOG descriptor from the frame and convert it to a useable format
 	cv::Mat_<double> hog_descriptor;
 	Extract_FHOG_descriptor(hog_descriptor, aligned_face_for_au, this->num_hog_rows, this->num_hog_cols);
@@ -286,12 +296,6 @@ std::pair<std::vector<std::pair<string, double>>, std::vector<std::pair<string,
 	//cv::Mat_<double> aligned_face_cols_double;
 	//aligned_face_cols.convertTo(aligned_face_cols_double, CV_64F);
 	
-	// Visualising the median HOG
-	if (visualise)
-	{
-		FaceAnalysis::Visualise_FHOG(hog_descriptor, num_hog_rows, num_hog_cols, hog_descriptor_visualisation);
-	}
-
 	// Perform AU prediction	
 	auto AU_predictions_intensity = PredictCurrentAUs(orientation_to_use);
 	auto AU_predictions_occurence = PredictCurrentAUsClass(orientation_to_use);
@@ -306,11 +310,12 @@ std::pair<std::vector<std::pair<string, double>>, std::vector<std::pair<string,
 			AU_predictions_intensity[au].second = 5;
 	}
 	
-	return std::pair<std::vector<std::pair<std::string, double>>, std::vector<std::pair<std::string, double>>>(AU_predictions_intensity, AU_predictions_occurence);
+	AU_predictions_reg = AU_predictions_intensity;
+	AU_predictions_class = AU_predictions_occurence;
 
 }
 
-void FaceAnalyser::AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& detected_landmarks, bool success, double timestamp_seconds, bool online, bool visualise)
+void FaceAnalyser::AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& detected_landmarks, bool success, double timestamp_seconds, bool online)
 {
 
 	frames_tracking++;
@@ -318,12 +323,13 @@ void FaceAnalyser::AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& det
 	// Extract shape parameters from the detected landmarks
 	cv::Vec6f params_global;
 	cv::Mat_<float> params_local;
-	pdm.CalcParams(params_global, params_local, detected_landmarks);
 
 	// First align the face if tracking was successfull
 	if(success)
 	{
 
+		pdm.CalcParams(params_global, params_local, detected_landmarks);
+
 		// The aligned face requirement for AUs
 		AlignFaceMask(aligned_face_for_au, frame, detected_landmarks, params_global, pdm, triangulation, true, align_scale_au, align_width_au, align_height_au);
 
@@ -343,6 +349,7 @@ void FaceAnalyser::AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& det
 		aligned_face_for_au = cv::Mat(align_height_au, align_width_au, CV_8UC3);
 		aligned_face_for_output.setTo(0);
 		aligned_face_for_au.setTo(0);
+		params_local = cv::Mat_<float>(pdm.NumberOfModes(), 1, 0.0f);
 	}
 
 	if (aligned_face_for_output.channels() == 3 && out_grayscale)
@@ -424,21 +431,9 @@ void FaceAnalyser::AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& det
 		UpdateRunningMedian(this->geom_desc_hist, this->geom_hist_sum, this->geom_descriptor_median, geom_descriptor_frame, update_median, this->num_bins_geom, this->min_val_geom, this->max_val_geom);
 	}
 	
-	// Visualising the median HOG
-	if(visualise)
-	{
-		FaceAnalysis::Visualise_FHOG(hog_descriptor, num_hog_rows, num_hog_cols, hog_descriptor_visualisation);
-	}
-
 	// Perform AU prediction	
 	AU_predictions_reg = PredictCurrentAUs(orientation_to_use);
 
-	std::vector<std::pair<std::string, double>> AU_predictions_reg_corrected;
-	if(online)
-	{
-		AU_predictions_reg_corrected = CorrectOnlineAUs(AU_predictions_reg, orientation_to_use, true, false, success, true);
-	}
-
 	// Add the reg predictions to the historic data
 	for (size_t au = 0; au < AU_predictions_reg.size(); ++au)
 	{
@@ -452,6 +447,9 @@ void FaceAnalyser::AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& det
 		else
 		{
 			AU_predictions_reg_all_hist[AU_predictions_reg[au].first].push_back(0);
+
+			// Also invalidate AU if not successful
+			AU_predictions_reg[au].second = 0;
 		}
 	}
 	
@@ -469,23 +467,27 @@ void FaceAnalyser::AddNextFrame(const cv::Mat& frame, const cv::Mat_<float>& det
 		else
 		{
 			AU_predictions_class_all_hist[AU_predictions_class[au].first].push_back(0);
+
+			// Also invalidate AU if not successful
+			AU_predictions_class[au].second = 0;
 		}
 	}	
 
-
+	// A workaround for online predictions to make them a bit more accurate
-	if(online)
+	std::vector<std::pair<std::string, double>> AU_predictions_reg_corrected;
+	if (online)
 	{
+		AU_predictions_reg_corrected = CorrectOnlineAUs(AU_predictions_reg, orientation_to_use, true, false, success, true);
 		AU_predictions_reg = AU_predictions_reg_corrected;
 	}
-	else
+
-	{
+	// Useful for prediction corrections (calibration after the whole video is processed)
 	if (success && frames_tracking_succ - 1 < max_init_frames)
 	{
 		hog_desc_frames_init.push_back(hog_descriptor);
 		geom_descriptor_frames_init.push_back(geom_descriptor_frame);
 		views.push_back(orientation_to_use);
 	}
-	}
 
 	this->current_time_seconds = timestamp_seconds;
 
@@ -982,11 +984,6 @@ vector<pair<string, double>> FaceAnalyser::PredictCurrentAUsClass(int view)
 	return predictions;
 }
 
-cv::Mat FaceAnalyser::GetLatestHOGDescriptorVisualisation()
-{
-	return hog_descriptor_visualisation;
-}
-
 vector<pair<string, double>> FaceAnalyser::GetCurrentAUsClass() const
 {
 	return AU_predictions_class;
@@ -1324,7 +1321,10 @@ void FaceAnalyser::PostprocessOutputFile(string output_file)
 	// Now overwrite the whole file
 	std::ofstream outfile(output_file, ios_base::out);
 	// Write the header
-	outfile << std::setprecision(4);
+	outfile << std::setprecision(2);
+	outfile << std::fixed;
+	outfile << std::noshowpoint;
+
 	outfile << output_file_contents[0].c_str() << endl;
 
 	// Write the contents

lib/local/FaceAnalyser/src/Face_utils.cpp

@@ -242,30 +242,6 @@ namespace FaceAnalysis
 		}
 	}
 
-
-	void Visualise_FHOG(const cv::Mat_<double>& descriptor, int num_rows, int num_cols, cv::Mat& visualisation)
-	{
-
-		// First convert to dlib format
-		dlib::array2d<dlib::matrix<float,31,1> > hog(num_rows, num_cols);
-		
-		cv::MatConstIterator_<double> descriptor_it = descriptor.begin();
-		for(int y = 0; y < num_cols; ++y)
-		{
-			for(int x = 0; x < num_rows; ++x)
-			{
-				for(unsigned int o = 0; o < 31; ++o)
-				{
-					hog[y][x](o) = *descriptor_it++;
-				}
-			}
-		}
-
-		// Draw the FHOG to OpenCV format
-		auto fhog_vis = dlib::draw_fhog(hog);
-		visualisation = dlib::toMat(fhog_vis).clone();
-	}
-
 	// Create a row vector Felzenszwalb HOG descriptor from a given image
 	void Extract_FHOG_descriptor(cv::Mat_<double>& descriptor, const cv::Mat& image, int& num_rows, int& num_cols, int cell_size)
 	{
@@ -442,7 +418,7 @@ namespace FaceAnalysis
 
 
 	//===========================================================================
-	// Visualisation functions
+	// Visualisation functions, TODO rem
 	//===========================================================================
 	void Project(cv::Mat_<float>& dest, const cv::Mat_<float>& mesh, float fx, float fy, float cx, float cy)
 	{
@@ -485,81 +461,6 @@ namespace FaceAnalysis
 
 	}
 
-	//===========================================================================
-	// Angle representation conversion helpers
-	//===========================================================================
-
-	// Using the XYZ convention R = Rx * Ry * Rz, left-handed positive sign
-	cv::Matx33f Euler2RotationMatrix(const cv::Vec3f& eulerAngles)
-	{
-		cv::Matx33f rotation_matrix;
-
-		float s1 = sin(eulerAngles[0]);
-		float s2 = sin(eulerAngles[1]);
-		float s3 = sin(eulerAngles[2]);
-
-		float c1 = cos(eulerAngles[0]);
-		float c2 = cos(eulerAngles[1]);
-		float c3 = cos(eulerAngles[2]);
-
-		rotation_matrix(0, 0) = c2 * c3;
-		rotation_matrix(0, 1) = -c2 *s3;
-		rotation_matrix(0, 2) = s2;
-		rotation_matrix(1, 0) = c1 * s3 + c3 * s1 * s2;
-		rotation_matrix(1, 1) = c1 * c3 - s1 * s2 * s3;
-		rotation_matrix(1, 2) = -c2 * s1;
-		rotation_matrix(2, 0) = s1 * s3 - c1 * c3 * s2;
-		rotation_matrix(2, 1) = c3 * s1 + c1 * s2 * s3;
-		rotation_matrix(2, 2) = c1 * c2;
-
-		return rotation_matrix;
-	}
-	
-	// Using the XYZ convention R = Rx * Ry * Rz, left-handed positive sign
-	cv::Vec3f RotationMatrix2Euler(const cv::Matx33f& rotation_matrix)
-	{
-		float q0 = sqrt(1 + rotation_matrix(0, 0) + rotation_matrix(1, 1) + rotation_matrix(2, 2)) / 2.0f;
-		float q1 = (rotation_matrix(2, 1) - rotation_matrix(1, 2)) / (4.0f*q0);
-		float q2 = (rotation_matrix(0, 2) - rotation_matrix(2, 0)) / (4.0f*q0);
-		float q3 = (rotation_matrix(1, 0) - rotation_matrix(0, 1)) / (4.0f*q0);
-
-		float t1 = 2.0f * (q0*q2 + q1*q3);
-
-		float yaw = asin(2.0 * (q0*q2 + q1*q3));
-		float pitch = atan2(2.0 * (q0*q1 - q2*q3), q0*q0 - q1*q1 - q2*q2 + q3*q3);
-		float roll = atan2(2.0 * (q0*q3 - q1*q2), q0*q0 + q1*q1 - q2*q2 - q3*q3);
-
-		return cv::Vec3f(pitch, yaw, roll);
-	}
-
-	cv::Vec3f Euler2AxisAngle(const cv::Vec3f& euler)
-	{
-		cv::Matx33f rotMatrix = Euler2RotationMatrix(euler);
-		cv::Vec3f axis_angle;
-		cv::Rodrigues(rotMatrix, axis_angle);
-		return axis_angle;
-	}
-
-	cv::Vec3f AxisAngle2Euler(const cv::Vec3f& axis_angle)
-	{
-		cv::Matx33f rotation_matrix;
-		cv::Rodrigues(axis_angle, rotation_matrix);
-		return RotationMatrix2Euler(rotation_matrix);
-	}
-
-	cv::Matx33f AxisAngle2RotationMatrix(const cv::Vec3f& axis_angle)
-	{
-		cv::Matx33f rotation_matrix;
-		cv::Rodrigues(axis_angle, rotation_matrix);
-		return rotation_matrix;
-	}
-
-	cv::Vec3f RotationMatrix2AxisAngle(const cv::Matx33f& rotation_matrix)
-	{
-		cv::Vec3f axis_angle;
-		cv::Rodrigues(rotation_matrix, axis_angle);
-		return axis_angle;
-	}
 
 	//============================================================================
 	// Matrix reading functionality

lib/local/FaceAnalyser/src/PDM.cpp

@@ -48,6 +48,7 @@
 #endif
 
 #include <Face_utils.h>
+#include <RotationHelpers.h>
 
 // OpenBLAS
 #include <cblas.h>
@@ -107,7 +108,7 @@ void PDM::CalcShape2D(cv::Mat_<float>& out_shape, const cv::Mat_<float>& params_
 
 								 // get the rotation matrix from the euler angles
 	cv::Vec3f euler(params_global[1], params_global[2], params_global[3]);
-	cv::Matx33f currRot = Euler2RotationMatrix(euler);
+	cv::Matx33f currRot = Utilities::Euler2RotationMatrix(euler);
 
 	// get the 3D shape of the object
 	cv::Mat_<float> Shape_3D = mean_shape + princ_comp * params_local;
@@ -138,7 +139,7 @@ void PDM::CalcParams(cv::Vec6f& out_params_global, const cv::Rect_<float>& bound
 	CalcShape3D(current_shape, params_local);
 
 	// rotate the shape
-	cv::Matx33f rotation_matrix = Euler2RotationMatrix(rotation);
+	cv::Matx33f rotation_matrix = Utilities::Euler2RotationMatrix(rotation);
 
 	cv::Mat_<float> reshaped = current_shape.reshape(1, 3);
 
@@ -213,7 +214,7 @@ void PDM::ComputeRigidJacobian(const cv::Mat_<float>& p_local, const cv::Vec6f&
 
 	// Get the rotation matrix
 	cv::Vec3f euler(params_global[1], params_global[2], params_global[3]);
-	cv::Matx33f currRot = Euler2RotationMatrix(euler);
+	cv::Matx33f currRot = Utilities::Euler2RotationMatrix(euler);
 
 	float r11 = currRot(0, 0);
 	float r12 = currRot(0, 1);
@@ -306,7 +307,7 @@ void PDM::ComputeJacobian(const cv::Mat_<float>& params_local, const cv::Vec6f&
 	this->CalcShape3D(shape_3D, params_local);
 
 	cv::Vec3f euler(params_global[1], params_global[2], params_global[3]);
-	cv::Matx33f currRot = Euler2RotationMatrix(euler);
+	cv::Matx33f currRot = Utilities::Euler2RotationMatrix(euler);
 
 	float r11 = currRot(0, 0);
 	float r12 = currRot(0, 1);
@@ -404,7 +405,7 @@ void PDM::UpdateModelParameters(const cv::Mat_<float>& delta_p, cv::Mat_<float>&
 
 	// get the original rotation matrix	
 	cv::Vec3f eulerGlobal(params_global[1], params_global[2], params_global[3]);
-	cv::Matx33f R1 = Euler2RotationMatrix(eulerGlobal);
+	cv::Matx33f R1 = Utilities::Euler2RotationMatrix(eulerGlobal);
 
 	// construct R' = [1, -wz, wy
 	//               wz, 1, -wx
@@ -422,8 +423,8 @@ void PDM::UpdateModelParameters(const cv::Mat_<float>& delta_p, cv::Mat_<float>&
 	cv::Matx33f R3 = R1 *R2;
 
 	// Extract euler angle (through axis angle first to make sure it's legal)
-	cv::Vec3f axis_angle = RotationMatrix2AxisAngle(R3);
+	cv::Vec3f axis_angle = Utilities::RotationMatrix2AxisAngle(R3);
-	cv::Vec3f euler = AxisAngle2Euler(axis_angle);
+	cv::Vec3f euler = Utilities::AxisAngle2Euler(axis_angle);
 
 	params_global[1] = euler[0];
 	params_global[2] = euler[1];
@@ -466,7 +467,7 @@ void PDM::CalcParams(cv::Vec6f& out_params_global, cv::Mat_<float>& out_params_l
 	float scaling = ((width / model_bbox.width) + (height / model_bbox.height)) / 2;
         
 	cv::Vec3f rotation_init(rotation[0], rotation[1], rotation[2]);
-	cv::Matx33f R = Euler2RotationMatrix(rotation_init);
+	cv::Matx33f R = Utilities::Euler2RotationMatrix(rotation_init);
 	cv::Vec2f translation((min_x + max_x) / 2.0, (min_y + max_y) / 2.0);
     
 	cv::Mat_<float> loc_params(this->NumberOfModes(),1, 0.0);
@@ -553,7 +554,7 @@ void PDM::CalcParams(cv::Vec6f& out_params_global, cv::Mat_<float>& out_params_l
 		translation[0] = glob_params[4];
 		translation[1] = glob_params[5];
         
-		R = Euler2RotationMatrix(rotation_init);
+		R = Utilities::Euler2RotationMatrix(rotation_init);
 
 		R_2D(0,0) = R(0,0);R_2D(0,1) = R(0,1); R_2D(0,2) = R(0,2);
 		R_2D(1,0) = R(1,0);R_2D(1,1) = R(1,1); R_2D(1,2) = R(1,2); 

lib/local/GazeAnalyser/CMakeLists.txt

@@ -10,6 +10,9 @@ include_directories(../../3rdParty/OpenBLAS/include)
 #LandmarkDetector library
 include_directories(../../local/LandmarkDetector/include)
 
+#Utilities library
+include_directories(../../local/Utilities/include)
+
 SET(SOURCE
     src/GazeEstimation.cpp
 )

lib/local/GazeAnalyser/GazeAnalyser.vcxproj

@@ -91,7 +91,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <SDLCheck>true</SDLCheck>
-      <AdditionalIncludeDirectories>./include;../LandmarkDetector/include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;../LandmarkDetector/include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
     </ClCompile>
   </ItemDefinitionGroup>
@@ -100,7 +100,7 @@
       <WarningLevel>Level3</WarningLevel>
       <Optimization>Disabled</Optimization>
       <SDLCheck>true</SDLCheck>
-      <AdditionalIncludeDirectories>./include;../LandmarkDetector/include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;../LandmarkDetector/include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <PreprocessorDefinitions>WIN64;_DEBUG;_LIB;EIGEN_MPL2_ONLY;%(PreprocessorDefinitions)</PreprocessorDefinitions>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
     </ClCompile>
@@ -113,7 +113,7 @@
       <IntrinsicFunctions>true</IntrinsicFunctions>
       <SDLCheck>
       </SDLCheck>
-      <AdditionalIncludeDirectories>./include;../LandmarkDetector/include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;../LandmarkDetector/include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
       <PreprocessorDefinitions>WIN32;NDEBUG;_LIB;%(PreprocessorDefinitions)</PreprocessorDefinitions>
       <EnableEnhancedInstructionSet>StreamingSIMDExtensions2</EnableEnhancedInstructionSet>
@@ -126,15 +126,17 @@
   <ItemDefinitionGroup Condition="'$(Configuration)|$(Platform)'=='Release|x64'">
     <ClCompile>
       <WarningLevel>Level3</WarningLevel>
-      <Optimization>MaxSpeed</Optimization>
+      <Optimization>Full</Optimization>
       <FunctionLevelLinking>true</FunctionLevelLinking>
-      <IntrinsicFunctions>true</IntrinsicFunctions>
+      <IntrinsicFunctions>false</IntrinsicFunctions>
       <SDLCheck>
       </SDLCheck>
-      <AdditionalIncludeDirectories>./include;../LandmarkDetector/include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;../LandmarkDetector/include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
       <PreprocessorDefinitions>WIN64;NDEBUG;_LIB;%(PreprocessorDefinitions)</PreprocessorDefinitions>
       <EnableEnhancedInstructionSet>AdvancedVectorExtensions</EnableEnhancedInstructionSet>
+      <InlineFunctionExpansion>AnySuitable</InlineFunctionExpansion>
+      <FavorSizeOrSpeed>Speed</FavorSizeOrSpeed>
     </ClCompile>
     <Link>
       <EnableCOMDATFolding>true</EnableCOMDATFolding>

lib/local/GazeAnalyser/include/GazeEstimation.h

@@ -43,7 +43,6 @@ namespace GazeAnalysis
 {
 
 	void EstimateGaze(const LandmarkDetector::CLNF& clnf_model, cv::Point3f& gaze_absolute, float fx, float fy, float cx, float cy, bool left_eye);
-	void DrawGaze(cv::Mat img, const LandmarkDetector::CLNF& clnf_model, cv::Point3f gazeVecAxisLeft, cv::Point3f gazeVecAxisRight, float fx, float fy, float cx, float cy);
 
 	// Getting the gaze angle in radians with respect to the world coordinates (camera plane), when looking ahead straight at camera plane the gaze angle will be (0,0)
 	cv::Vec2d GetGazeAngle(cv::Point3f& gaze_vector_1, cv::Point3f& gaze_vector_2);

lib/local/GazeAnalyser/src/GazeEstimation.cpp

@@ -42,15 +42,12 @@
 
 #include "LandmarkDetectorUtils.h"
 #include "LandmarkDetectorFunc.h"
+#include "RotationHelpers.h"
 
 using namespace std;
 
 using namespace GazeAnalysis;
 
-// For subpixel accuracy drawing
-const int gaze_draw_shiftbits = 4;
-const int gaze_draw_multiplier = 1 << 4;
-
 cv::Point3f RaySphereIntersect(cv::Point3f rayOrigin, cv::Point3f rayDir, cv::Point3f sphereOrigin, float sphereRadius){
 
 	float dx = rayDir.x;
@@ -93,7 +90,7 @@ void GazeAnalysis::EstimateGaze(const LandmarkDetector::CLNF& clnf_model, cv::Po
 {
 	cv::Vec6d headPose = LandmarkDetector::GetPose(clnf_model, fx, fy, cx, cy);
 	cv::Vec3d eulerAngles(headPose(3), headPose(4), headPose(5));
-	cv::Matx33d rotMat = LandmarkDetector::Euler2RotationMatrix(eulerAngles);
+	cv::Matx33d rotMat = Utilities::Euler2RotationMatrix(eulerAngles);
 
 	int part = -1;
 	for (size_t i = 0; i < clnf_model.hierarchical_models.size(); ++i)
@@ -149,47 +146,3 @@ cv::Vec2d GazeAnalysis::GetGazeAngle(cv::Point3f& gaze_vector_1, cv::Point3f& ga
 	return cv::Vec2d(x_angle, y_angle);
 
 }
-void GazeAnalysis::DrawGaze(cv::Mat img, const LandmarkDetector::CLNF& clnf_model, cv::Point3f gazeVecAxisLeft, cv::Point3f gazeVecAxisRight, float fx, float fy, float cx, float cy)
-{
-
-	cv::Mat cameraMat = (cv::Mat_<double>(3, 3) << fx, 0, cx, 0, fy, cy, 0, 0, 0);
-
-	int part_left = -1;
-	int part_right = -1;
-	for (size_t i = 0; i < clnf_model.hierarchical_models.size(); ++i)
-	{
-		if (clnf_model.hierarchical_model_names[i].compare("left_eye_28") == 0)
-		{
-			part_left = i;
-		}
-		if (clnf_model.hierarchical_model_names[i].compare("right_eye_28") == 0)
-		{
-			part_right = i;
-		}
-	}
-
-	cv::Mat eyeLdmks3d_left = clnf_model.hierarchical_models[part_left].GetShape(fx, fy, cx, cy);
-	cv::Point3f pupil_left = GetPupilPosition(eyeLdmks3d_left);
-
-	cv::Mat eyeLdmks3d_right = clnf_model.hierarchical_models[part_right].GetShape(fx, fy, cx, cy);
-	cv::Point3f pupil_right = GetPupilPosition(eyeLdmks3d_right);
-
-	vector<cv::Point3d> points_left;
-	points_left.push_back(cv::Point3d(pupil_left));
-	points_left.push_back(cv::Point3d(pupil_left + gazeVecAxisLeft*50.0));
-
-	vector<cv::Point3d> points_right;
-	points_right.push_back(cv::Point3d(pupil_right));
-	points_right.push_back(cv::Point3d(pupil_right + gazeVecAxisRight*50.0));
-
-	cv::Mat_<double> proj_points;
-	cv::Mat_<double> mesh_0 = (cv::Mat_<double>(2, 3) << points_left[0].x, points_left[0].y, points_left[0].z, points_left[1].x, points_left[1].y, points_left[1].z);
-	LandmarkDetector::Project(proj_points, mesh_0, fx, fy, cx, cy);
-	cv::line(img, cv::Point(cvRound(proj_points.at<double>(0,0) * (double)gaze_draw_multiplier), cvRound(proj_points.at<double>(0, 1) * (double)gaze_draw_multiplier)),
-		cv::Point(cvRound(proj_points.at<double>(1, 0) * (double)gaze_draw_multiplier), cvRound(proj_points.at<double>(1, 1) * (double)gaze_draw_multiplier)), cv::Scalar(110, 220, 0), 2, CV_AA, gaze_draw_shiftbits);
-
-	cv::Mat_<double> mesh_1 = (cv::Mat_<double>(2, 3) << points_right[0].x, points_right[0].y, points_right[0].z, points_right[1].x, points_right[1].y, points_right[1].z);
-	LandmarkDetector::Project(proj_points, mesh_1, fx, fy, cx, cy);
-	cv::line(img, cv::Point(cvRound(proj_points.at<double>(0, 0) * (double)gaze_draw_multiplier), cvRound(proj_points.at<double>(0, 1) * (double)gaze_draw_multiplier)),
-		cv::Point(cvRound(proj_points.at<double>(1, 0) * (double)gaze_draw_multiplier), cvRound(proj_points.at<double>(1, 1) * (double)gaze_draw_multiplier)), cv::Scalar(110, 220, 0), 2, CV_AA, gaze_draw_shiftbits);
-}

lib/local/LandmarkDetector/CMakeLists.txt

@@ -6,6 +6,9 @@ include_directories(${BOOST_INCLUDE_DIR})
 #OpenBlas library
 include_directories(../../3rdParty/OpenBLAS/include)
 
+#Utilities library
+include_directories(../../local/Utilities/include)
+
 SET(SOURCE
     src/CCNF_patch_expert.cpp
 	src/LandmarkDetectionValidator.cpp

lib/local/LandmarkDetector/LandmarkDetector.vcxproj

@@ -93,7 +93,7 @@
   <ItemDefinitionGroup Condition="'$(Configuration)|$(Platform)'=='Debug|Win32'">
     <ClCompile>
       <Optimization>Disabled</Optimization>
-      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <PreprocessorDefinitions>WIN32;_DEBUG;_LIB;EIGEN_MPL2_ONLY;%(PreprocessorDefinitions)</PreprocessorDefinitions>
       <MinimalRebuild>true</MinimalRebuild>
       <BasicRuntimeChecks>EnableFastChecks</BasicRuntimeChecks>
@@ -117,7 +117,7 @@ xcopy /I /E /Y /D "$(SolutionDir)lib\3rdParty\OpenCV3.1\classifiers" "$(OutDir)c
   <ItemDefinitionGroup Condition="'$(Configuration)|$(Platform)'=='Debug|x64'">
     <ClCompile>
       <Optimization>Disabled</Optimization>
-      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <PreprocessorDefinitions>WIN64;_DEBUG;_LIB;EIGEN_MPL2_ONLY;%(PreprocessorDefinitions)</PreprocessorDefinitions>
       <BasicRuntimeChecks>EnableFastChecks</BasicRuntimeChecks>
       <RuntimeLibrary>MultiThreadedDebugDLL</RuntimeLibrary>
@@ -141,7 +141,7 @@ xcopy /I /E /Y /D "$(SolutionDir)lib\3rdParty\OpenCV3.1\classifiers" "$(OutDir)c
     <ClCompile>
       <Optimization>Full</Optimization>
       <IntrinsicFunctions>true</IntrinsicFunctions>
-      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <PreprocessorDefinitions>WIN32;NDEBUG;_LIB;%(PreprocessorDefinitions)</PreprocessorDefinitions>
       <RuntimeLibrary>MultiThreadedDLL</RuntimeLibrary>
       <FunctionLevelLinking>false</FunctionLevelLinking>
@@ -165,8 +165,8 @@ xcopy /I /E /Y /D "$(SolutionDir)lib\3rdParty\OpenCV3.1\classifiers" "$(OutDir)c
   <ItemDefinitionGroup Condition="'$(Configuration)|$(Platform)'=='Release|x64'">
     <ClCompile>
       <Optimization>Full</Optimization>
-      <IntrinsicFunctions>true</IntrinsicFunctions>
+      <IntrinsicFunctions>false</IntrinsicFunctions>
-      <AdditionalIncludeDirectories>./include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
+      <AdditionalIncludeDirectories>./include;$(SolutionDir)lib\local\Utilities\include;%(AdditionalIncludeDirectories)</AdditionalIncludeDirectories>
       <PreprocessorDefinitions>WIN64;NDEBUG;_LIB;%(PreprocessorDefinitions)</PreprocessorDefinitions>
       <RuntimeLibrary>MultiThreadedDLL</RuntimeLibrary>
       <FunctionLevelLinking>false</FunctionLevelLinking>
@@ -178,6 +178,7 @@ xcopy /I /E /Y /D "$(SolutionDir)lib\3rdParty\OpenCV3.1\classifiers" "$(OutDir)c
       <OpenMPSupport>false</OpenMPSupport>
       <AdditionalOptions>/Zm300 %(AdditionalOptions)</AdditionalOptions>
       <MultiProcessorCompilation>true</MultiProcessorCompilation>
+      <InlineFunctionExpansion>AnySuitable</InlineFunctionExpansion>
     </ClCompile>
     <Lib>
       <OutputFile>$(OutDir)$(TargetName)$(TargetExt)</OutputFile>

lib/local/LandmarkDetector/include/LandmarkDetectorModel.h

@@ -93,16 +93,13 @@ public:
 	dlib::frontal_face_detector face_detector_HOG;
 
 
-	// Validate if the detected landmarks are correct using an SVR regressor
+	// Validate if the detected landmarks are correct using a predictor on detected landmarks
 	DetectionValidator	landmark_validator; 
 
-	// Indicating if landmark detection succeeded (based on SVR validator)
+	// Indicating if landmark detection succeeded (based on detection validator)
 	bool				detection_success; 
 
-	// Indicating if the tracking has been initialised (for video based tracking)
+	//  Representing how confident we are that tracking succeeds (0 - complete failure, 1 - perfect success)
-	bool				tracking_initialised;
-
-	// The actual output of the regressor (-1 is perfect detection 1 is worst detection)
 	double				detection_certainty; 
 
 	// Indicator if eye model is there for eye detection
@@ -131,10 +128,6 @@ public:
 	// Useful when resetting or initialising the model closer to a specific location (when multiple faces are present)
 	cv::Point_<double> preference_det;
 	
-	// Useful to control where face detections should not occur (for live demos etc.)
-	double detect_Z_max = -1; // Do not detect faces further than this in mm. (-1) refers to detecting all faces
-	cv::Rect_<double> detect_ROI = cv::Rect(0, 0, 1, 1); // the face detection bounds (0,0,1,1) means full image (0.25,0.25,0.5,0.5) would imply region of the face only
-
 	// A default constructor
 	CLNF();
 
@@ -178,8 +171,17 @@ public:
 	// Helper reading function
 	void Read_CLNF(string clnf_location);
 	
+	// Allows to set initialization accross hierarchical models as well
+	bool IsInitialized() const { return tracking_initialised; }
+	void SetInitialized(bool initialized);
+	void SetDetectionSuccess(bool detection_success);
+
 private:
 
+
+	// Indicating if the tracking has been initialised (for video based tracking)
+	bool				tracking_initialised;
+
 	// the speedup of RLMS using precalculated KDE responses (described in Saragih 2011 RLMS paper)
 	map<int, cv::Mat_<float> >		kde_resp_precalc;
 

lib/local/LandmarkDetector/include/LandmarkDetectorParameters.h

@@ -102,9 +102,6 @@ struct FaceModelParameters
 	// Should the parameters be refined for different scales
 	bool refine_parameters;
 
-	// Using the brand new and experimental gaze tracker
-	bool track_gaze;
-
 	FaceModelParameters();
 
 	FaceModelParameters(vector<string> &arguments);

lib/local/LandmarkDetector/include/LandmarkDetectorUtils.h

@@ -48,18 +48,6 @@ namespace LandmarkDetector
 	//===========================================================================	
 	// Defining a set of useful utility functions to be used within CLNF
 
-
-	//=============================================================================================
-	// Helper functions for parsing the inputs
-	//=============================================================================================
-	void get_video_input_output_params(vector<string> &input_video_file, vector<string> &output_files,
-		vector<string> &output_video_files, string &output_codec, vector<string> &arguments);
-
-	void get_camera_params(int &device, float &fx, float &fy, float &cx, float &cy, vector<string> &arguments);
-
-	void get_image_input_output_params(vector<string> &input_image_files, vector<string> &output_feature_files, vector<string> &output_pose_files, vector<string> &output_image_files,
-		vector<cv::Rect_<double>> &input_bounding_boxes, vector<string> &arguments);
-
 	//===========================================================================
 	// Fast patch expert response computation (linear model across a ROI) using normalised cross-correlation
 	//===========================================================================
@@ -82,13 +70,6 @@ namespace LandmarkDetector
 	//===========================================================================
 	// Visualisation functions
 	//===========================================================================
-	void Project(cv::Mat_<double>& dest, const cv::Mat_<double>& mesh, double fx, double fy, double cx, double cy);
-	void DrawBox(cv::Mat image, cv::Vec6d pose, cv::Scalar color, int thickness, float fx, float fy, float cx, float cy);
-
-	// Drawing face bounding box
-	vector<std::pair<cv::Point2d, cv::Point2d>> CalculateBox(cv::Vec6d pose, float fx, float fy, float cx, float cy);
-	void DrawBox(vector<pair<cv::Point, cv::Point>> lines, cv::Mat image, cv::Scalar color, int thickness);
-
 	vector<cv::Point2d> CalculateVisibleLandmarks(const cv::Mat_<double>& shape2D, const cv::Mat_<int>& visibilities);
 	vector<cv::Point2d> CalculateVisibleLandmarks(const CLNF& clnf_model);
 	vector<cv::Point2d> CalculateVisibleEyeLandmarks(const CLNF& clnf_model);
@@ -96,45 +77,23 @@ namespace LandmarkDetector
 	vector<cv::Point2d> CalculateAllLandmarks(const cv::Mat_<double>& shape2D);
 	vector<cv::Point2d> CalculateAllLandmarks(const CLNF& clnf_model);
 	vector<cv::Point2d> CalculateAllEyeLandmarks(const CLNF& clnf_model);
-
+	vector<cv::Point3d> Calculate3DEyeLandmarks(const CLNF& clnf_model, double fx, double fy, double cx, double cy);
-	void DrawLandmarks(cv::Mat img, vector<cv::Point> landmarks);
-
-	void Draw(cv::Mat img, const cv::Mat_<double>& shape2D, const cv::Mat_<int>& visibilities);
-	void Draw(cv::Mat img, const cv::Mat_<double>& shape2D);
-	void Draw(cv::Mat img, const CLNF& clnf_model);
-
-
-	//===========================================================================
-	// Angle representation conversion helpers
-	//===========================================================================
-	cv::Matx33d Euler2RotationMatrix(const cv::Vec3d& eulerAngles);
-
-	// Using the XYZ convention R = Rx * Ry * Rz, left-handed positive sign
-	cv::Vec3d RotationMatrix2Euler(const cv::Matx33d& rotation_matrix);
-
-	cv::Vec3d Euler2AxisAngle(const cv::Vec3d& euler);
-
-	cv::Vec3d AxisAngle2Euler(const cv::Vec3d& axis_angle);
-
-	cv::Matx33d AxisAngle2RotationMatrix(const cv::Vec3d& axis_angle);
-
-	cv::Vec3d RotationMatrix2AxisAngle(const cv::Matx33d& rotation_matrix);
 
 	//============================================================================
 	// Face detection helpers
 	//============================================================================
 
 	// Face detection using Haar cascade classifier
-	bool DetectFaces(vector<cv::Rect_<double> >& o_regions, const cv::Mat_<uchar>& intensity, double min_width = -1, cv::Rect_<double> roi = cv::Rect_<double>(0.0, 0.0, 1.0, 1.0));
+	bool DetectFaces(vector<cv::Rect_<double> >& o_regions, const cv::Mat_<uchar>& intensity);
-	bool DetectFaces(vector<cv::Rect_<double> >& o_regions, const cv::Mat_<uchar>& intensity, cv::CascadeClassifier& classifier, double min_width = -1, cv::Rect_<double> roi = cv::Rect_<double>(0.0, 0.0, 1.0, 1.0));
+	bool DetectFaces(vector<cv::Rect_<double> >& o_regions, const cv::Mat_<uchar>& intensity, cv::CascadeClassifier& classifier);
 	// The preference point allows for disambiguation if multiple faces are present (pick the closest one), if it is not set the biggest face is chosen
-	bool DetectSingleFace(cv::Rect_<double>& o_region, const cv::Mat_<uchar>& intensity, cv::CascadeClassifier& classifier, const cv::Point preference = cv::Point(-1,-1), double min_width = -1, cv::Rect_<double> roi = cv::Rect_<double>(0.0, 0.0, 1.0, 1.0));
+	bool DetectSingleFace(cv::Rect_<double>& o_region, const cv::Mat_<uchar>& intensity, cv::CascadeClassifier& classifier, const cv::Point preference = cv::Point(-1,-1));
 
 	// Face detection using HOG-SVM classifier
-	bool DetectFacesHOG(vector<cv::Rect_<double> >& o_regions, const cv::Mat_<uchar>& intensity, std::vector<double>& confidences, double min_width = -1, cv::Rect_<double> roi = cv::Rect_<double>(0.0, 0.0, 1.0, 1.0));
+	bool DetectFacesHOG(vector<cv::Rect_<double> >& o_regions, const cv::Mat_<uchar>& intensity, std::vector<double>& confidences);
-	bool DetectFacesHOG(vector<cv::Rect_<double> >& o_regions, const cv::Mat_<uchar>& intensity, dlib::frontal_face_detector& classifier, std::vector<double>& confidences, double min_width = -1, cv::Rect_<double> roi = cv::Rect_<double>(0.0, 0.0, 1.0, 1.0));
+	bool DetectFacesHOG(vector<cv::Rect_<double> >& o_regions, const cv::Mat_<uchar>& intensity, dlib::frontal_face_detector& classifier, std::vector<double>& confidences);
 	// The preference point allows for disambiguation if multiple faces are present (pick the closest one), if it is not set the biggest face is chosen
-	bool DetectSingleFaceHOG(cv::Rect_<double>& o_region, const cv::Mat_<uchar>& intensity, dlib::frontal_face_detector& classifier, double& confidence, const cv::Point preference = cv::Point(-1,-1), double min_width = -1, cv::Rect_<double> roi = cv::Rect_<double>(0.0,0.0,1.0,1.0));
+	bool DetectSingleFaceHOG(cv::Rect_<double>& o_region, const cv::Mat_<uchar>& intensity, dlib::frontal_face_detector& classifier, double& confidence, const cv::Point preference = cv::Point(-1,-1));
 
 	//============================================================================
 	// Matrix reading functionality

lib/local/LandmarkDetector/src/LandmarkDetectionValidator.cpp

@@ -488,6 +488,10 @@ double DetectionValidator::Check(const cv::Vec3d& orientation, const cv::Mat_<uc
 		//dec = CheckCNN(warped, id);
 		dec = CheckCNN_tbb(warped, id);
 	}
+
+	// Convert it to a more interpretable signal (0 low confidence, 1 high confidence)
+	dec = 0.5 * (1 - dec);
+
 	return dec;
 }
 

lib/local/LandmarkDetector/src/LandmarkDetectorFunc.cpp

@@ -35,6 +35,7 @@
 #include "stdafx.h"
 
 #include <LandmarkDetectorFunc.h>
+#include "RotationHelpers.h"
 
 // OpenCV includes
 #include <opencv2/core/core.hpp>
@@ -83,7 +84,7 @@ cv::Vec6d LandmarkDetector::GetPose(const CLNF& clnf_model, float fx, float fy,
 
 		cv::solvePnP(landmarks_3D, landmarks_2D, camera_matrix, cv::Mat(), vec_rot, vec_trans, true);
 
-		cv::Vec3d euler = LandmarkDetector::AxisAngle2Euler(vec_rot);
+		cv::Vec3d euler = Utilities::AxisAngle2Euler(vec_rot);
 
 		return cv::Vec6d(vec_trans[0], vec_trans[1], vec_trans[2], euler[0], euler[1], euler[2]);
 	}
@@ -136,12 +137,12 @@ cv::Vec6d LandmarkDetector::GetPoseWRTCamera(const CLNF& clnf_model, float fx, f
 		double z_y = cv::sqrt(vec_trans[1] * vec_trans[1] + vec_trans[2] * vec_trans[2]);
 		double eul_y = -atan2(vec_trans[0], z_y);
 
-		cv::Matx33d camera_rotation = LandmarkDetector::Euler2RotationMatrix(cv::Vec3d(eul_x, eul_y, 0));
+		cv::Matx33d camera_rotation = Utilities::Euler2RotationMatrix(cv::Vec3d(eul_x, eul_y, 0));
-		cv::Matx33d head_rotation = LandmarkDetector::AxisAngle2RotationMatrix(vec_rot);
+		cv::Matx33d head_rotation = Utilities::AxisAngle2RotationMatrix(vec_rot);
 
 		cv::Matx33d corrected_rotation = camera_rotation * head_rotation;
 
-		cv::Vec3d euler_corrected = LandmarkDetector::RotationMatrix2Euler(corrected_rotation);
+		cv::Vec3d euler_corrected = Utilities::RotationMatrix2Euler(corrected_rotation);
 
 		return cv::Vec6d(vec_trans[0], vec_trans[1], vec_trans[2], euler_corrected[0], euler_corrected[1], euler_corrected[2]);
 	}
@@ -214,10 +215,10 @@ bool LandmarkDetector::DetectLandmarksInVideo(const cv::Mat_<uchar> &grayscale_i
 	// and using a smaller search area
 
 	// Indicating that this is a first detection in video sequence or after restart
-	bool initial_detection = !clnf_model.tracking_initialised;
+	bool initial_detection = !clnf_model.IsInitialized();
 
 	// Only do it if there was a face detection at all
-	if(clnf_model.tracking_initialised)
+	if(clnf_model.IsInitialized())
 	{
 
 		// The area of interest search size will depend if the previous track was successful
@@ -253,8 +254,8 @@ bool LandmarkDetector::DetectLandmarksInVideo(const cv::Mat_<uchar> &grayscale_i
 
 	// This is used for both detection (if it the tracking has not been initialised yet) or if the tracking failed (however we do this every n frames, for speed)
 	// This also has the effect of an attempt to reinitialise just after the tracking has failed, which is useful during large motions
-	if((!clnf_model.tracking_initialised && (clnf_model.failures_in_a_row + 1) % (params.reinit_video_every * 6) == 0) 
+	if((!clnf_model.IsInitialized() && (clnf_model.failures_in_a_row + 1) % (params.reinit_video_every * 6) == 0)
-		|| (clnf_model.tracking_initialised && !clnf_model.detection_success && params.reinit_video_every > 0 && clnf_model.failures_in_a_row % params.reinit_video_every == 0))
+		|| (clnf_model.IsInitialized() && !clnf_model.detection_success && params.reinit_video_every > 0 && clnf_model.failures_in_a_row % params.reinit_video_every == 0))
 	{
 
 		cv::Rect_<double> bounding_box;
@@ -276,33 +277,21 @@ bool LandmarkDetector::DetectLandmarksInVideo(const cv::Mat_<uchar> &grayscale_i
 
 		bool face_detection_success;
 
-		// For pruning face detections
-		double min_size;
-		if (clnf_model.detect_Z_max == -1)
-		{
-			min_size = -1;
-		}
-		else
-		{
-			double fx_est = 500.0 * (grayscale_image.cols / 640.0);
-			min_size = fx_est * 150.0 / clnf_model.detect_Z_max;
-		}
-
 		if(params.curr_face_detector == FaceModelParameters::HOG_SVM_DETECTOR)
 		{
 			double confidence;
-			face_detection_success = LandmarkDetector::DetectSingleFaceHOG(bounding_box, grayscale_image, clnf_model.face_detector_HOG, confidence, preference_det, min_size, clnf_model.detect_ROI);
+			face_detection_success = LandmarkDetector::DetectSingleFaceHOG(bounding_box, grayscale_image, clnf_model.face_detector_HOG, confidence, preference_det);
 		}
 		else if(params.curr_face_detector == FaceModelParameters::HAAR_DETECTOR)
 		{
-			face_detection_success = LandmarkDetector::DetectSingleFace(bounding_box, grayscale_image, clnf_model.face_detector_HAAR, preference_det, min_size, clnf_model.detect_ROI);
+			face_detection_success = LandmarkDetector::DetectSingleFace(bounding_box, grayscale_image, clnf_model.face_detector_HAAR, preference_det);
 		}
 
 		// Attempt to detect landmarks using the detected face (if unseccessful the detection will be ignored)
 		if(face_detection_success)
 		{
 			// Indicate that tracking has started as a face was detected
-			clnf_model.tracking_initialised = true;
+			clnf_model.SetInitialized(true);
 						
 			// Keep track of old model values so that they can be restored if redetection fails
 			cv::Vec6d params_global_init = clnf_model.params_global;
@@ -347,7 +336,7 @@ bool LandmarkDetector::DetectLandmarksInVideo(const cv::Mat_<uchar> &grayscale_i
 	}
 
 	// if the model has not been initialised yet class it as a failure
-	if(!clnf_model.tracking_initialised)
+	if(!clnf_model.IsInitialized())
 	{
 		clnf_model.failures_in_a_row++;
 	}
@@ -355,7 +344,7 @@ bool LandmarkDetector::DetectLandmarksInVideo(const cv::Mat_<uchar> &grayscale_i
 	// un-initialise the tracking
 	if(	clnf_model.failures_in_a_row > 100)
 	{
-		clnf_model.tracking_initialised = false;
+		clnf_model.SetInitialized(false);
 	}
 
 	return clnf_model.detection_success;
@@ -371,7 +360,7 @@ bool LandmarkDetector::DetectLandmarksInVideo(const cv::Mat_<uchar> &grayscale_i
 		clnf_model.pdm.CalcParams(clnf_model.params_global, bounding_box, clnf_model.params_local);		
 
 		// indicate that face was detected so initialisation is not necessary
-		clnf_model.tracking_initialised = true;
+		clnf_model.SetInitialized(true);
 	}
 
 	return DetectLandmarksInVideo(grayscale_image, clnf_model, params);
@@ -475,6 +464,9 @@ bool LandmarkDetector::DetectLandmarksInImage(const cv::Mat_<uchar> &grayscale_i
 		clnf_model.hierarchical_models[part].landmark_likelihoods = best_landmark_likelihoods_h[part].clone();
 	}
 
+	// To indicate that tracking/detection started and the values are valid, we assume that there is a face in the bounding box
+	clnf_model.SetInitialized(true);
+
 	return best_success;
 }
 

lib/local/LandmarkDetector/src/LandmarkDetectorModel.cpp

@@ -45,6 +45,7 @@
 
 // Local includes
 #include <LandmarkDetectorUtils.h>
+#include <RotationHelpers.h>
 
 using namespace LandmarkDetector;
 
@@ -66,10 +67,10 @@ CLNF::CLNF(string fname)
 }
 
 // Copy constructor (makes a deep copy of CLNF)
-CLNF::CLNF(const CLNF& other): pdm(other.pdm), params_local(other.params_local.clone()), params_global(other.params_global), detected_landmarks(other.detected_landmarks.clone()),
+CLNF::CLNF(const CLNF& other) : pdm(other.pdm), params_local(other.params_local.clone()), params_global(other.params_global), detected_landmarks(other.detected_landmarks.clone()),
-	landmark_likelihoods(other.landmark_likelihoods.clone()), patch_experts(other.patch_experts), landmark_validator(other.landmark_validator), face_detector_location(other.face_detector_location),
+landmark_likelihoods(other.landmark_likelihoods.clone()), patch_experts(other.patch_experts), landmark_validator(other.landmark_validator), face_detector_location(other.face_detector_location),
-	hierarchical_mapping(other.hierarchical_mapping), hierarchical_models(other.hierarchical_models), hierarchical_model_names(other.hierarchical_model_names),
+hierarchical_mapping(other.hierarchical_mapping), hierarchical_models(other.hierarchical_models), hierarchical_model_names(other.hierarchical_model_names),
-	hierarchical_params(other.hierarchical_params), eye_model(other.eye_model), detect_Z_max(other.detect_Z_max), detect_ROI(other.detect_ROI)
+hierarchical_params(other.hierarchical_params), eye_model(other.eye_model)
 {
 	this->detection_success = other.detection_success;
 	this->tracking_initialised = other.tracking_initialised;
@@ -78,20 +79,20 @@ CLNF::CLNF(const CLNF& other): pdm(other.pdm), params_local(other.params_local.c
 	this->failures_in_a_row = other.failures_in_a_row;
 
 	// Load the CascadeClassifier (as it does not have a proper copy constructor)
-	if(!face_detector_location.empty())
+	if (!face_detector_location.empty())
 	{
 		this->face_detector_HAAR.load(face_detector_location);
 	}
 	// Make sure the matrices are allocated properly
 	this->triangulations.resize(other.triangulations.size());
-	for(size_t i = 0; i < other.triangulations.size(); ++i)
+	for (size_t i = 0; i < other.triangulations.size(); ++i)
 	{
 		// Make sure the matrix is copied.
 		this->triangulations[i] = other.triangulations[i].clone();
 	}
 
 	// Make sure the matrices are allocated properly
-	for(std::map<int, cv::Mat_<float>>::const_iterator it = other.kde_resp_precalc.begin(); it!= other.kde_resp_precalc.end(); it++)
+	for (std::map<int, cv::Mat_<float>>::const_iterator it = other.kde_resp_precalc.begin(); it != other.kde_resp_precalc.end(); it++)
 	{
 		// Make sure the matrix is copied.
 		this->kde_resp_precalc.insert(std::pair<int, cv::Mat_<float>>(it->first, it->second.clone()));
@@ -111,7 +112,7 @@ CLNF & CLNF::operator= (const CLNF& other)
 		params_global = other.params_global;
 		detected_landmarks = other.detected_landmarks.clone();
 
-		landmark_likelihoods =other.landmark_likelihoods.clone();
+		landmark_likelihoods = other.landmark_likelihoods.clone();
 		patch_experts = Patch_experts(other.patch_experts);
 		landmark_validator = DetectionValidator(other.landmark_validator);
 		face_detector_location = other.face_detector_location;
@@ -125,20 +126,20 @@ CLNF & CLNF::operator= (const CLNF& other)
 		this->eye_model = other.eye_model;
 
 		// Load the CascadeClassifier (as it does not have a proper copy constructor)
-		if(!face_detector_location.empty())
+		if (!face_detector_location.empty())
 		{
 			this->face_detector_HAAR.load(face_detector_location);
 		}
 		// Make sure the matrices are allocated properly
 		this->triangulations.resize(other.triangulations.size());
-		for(size_t i = 0; i < other.triangulations.size(); ++i)
+		for (size_t i = 0; i < other.triangulations.size(); ++i)
 		{
 			// Make sure the matrix is copied.
 			this->triangulations[i] = other.triangulations[i].clone();
 		}
 
 		// Make sure the matrices are allocated properly
-		for(std::map<int, cv::Mat_<float>>::const_iterator it = other.kde_resp_precalc.begin(); it!= other.kde_resp_precalc.end(); it++)
+		for (std::map<int, cv::Mat_<float>>::const_iterator it = other.kde_resp_precalc.begin(); it != other.kde_resp_precalc.end(); it++)
 		{
 			// Make sure the matrix is copied.
 			this->kde_resp_precalc.insert(std::pair<int, cv::Mat_<float>>(it->first, it->second.clone()));
@@ -149,9 +150,6 @@ CLNF & CLNF::operator= (const CLNF& other)
 		this->hierarchical_models = other.hierarchical_models;
 		this->hierarchical_model_names = other.hierarchical_model_names;
 		this->hierarchical_params = other.hierarchical_params;
-
-		this->detect_Z_max = other.detect_Z_max;
-		this->detect_ROI = detect_ROI;
 	}
 
 	face_detector_HOG = dlib::get_frontal_face_detector();
@@ -192,8 +190,6 @@ CLNF::CLNF(const CLNF&& other)
 
 	this->eye_model = other.eye_model;
 
-	this->detect_Z_max = other.detect_Z_max;
-	this->detect_ROI = detect_ROI;
 }
 
 // Assignment operator for rvalues
@@ -229,9 +225,6 @@ CLNF & CLNF::operator= (const CLNF&& other)
 
 	this->eye_model = other.eye_model;
 
-	this->detect_Z_max = other.detect_Z_max;
-	this->detect_ROI = detect_ROI;
-
 	return *this;
 }
 
@@ -241,7 +234,7 @@ void CLNF::Read_CLNF(string clnf_location)
 	// Location of modules
 	ifstream locations(clnf_location.c_str(), ios_base::in);
 
-	if(!locations.is_open())
+	if (!locations.is_open())
 	{
 		cout << "Couldn't open the CLNF model file aborting" << endl;
 		cout.flush();
@@ -272,13 +265,13 @@ void CLNF::Read_CLNF(string clnf_location)
 
 		getline(lineStream, location);
 
-		if(location.size() > 0)
+		if (location.size() > 0)
 			location.erase(location.begin()); // remove the first space
 
 											  // remove carriage return at the end for compatibility with unix systems
-		if(location.size() > 0 && location.at(location.size()-1) == '\r')
+		if (location.size() > 0 && location.at(location.size() - 1) == '\r')
 		{
-			location = location.substr(0, location.size()-1);
+			location = location.substr(0, location.size() - 1);
 		}
 
 		// append the lovstion to root location (boost syntax)
@@ -304,18 +297,18 @@ void CLNF::Read_CLNF(string clnf_location)
 			// read in the triangulations
 			triangulations.resize(numViews);
 
-			for(int i = 0; i < numViews; ++i)
+			for (int i = 0; i < numViews; ++i)
 			{
 				LandmarkDetector::SkipComments(triangulationFile);
 				LandmarkDetector::ReadMat(triangulationFile, triangulations[i]);
 			}
 			cout << "Done" << endl;
 		}
-		else if(module.compare("PatchesIntensity") == 0)
+		else if (module.compare("PatchesIntensity") == 0)
 		{
 			intensity_expert_locations.push_back(location);
 		}
-		else if(module.compare("PatchesCCNF") == 0)
+		else if (module.compare("PatchesCCNF") == 0)
 		{
 			ccnf_expert_locations.push_back(location);
 		}
@@ -335,7 +328,7 @@ void CLNF::Read(string main_location)
 	cout << "Reading the CLNF landmark detector/tracker from: " << main_location << endl;
 
 	ifstream locations(main_location.c_str(), ios_base::in);
-	if(!locations.is_open())
+	if (!locations.is_open())
 	{
 		cout << "Couldn't open the model file, aborting" << endl;
 		return;
@@ -345,10 +338,6 @@ void CLNF::Read(string main_location)
 	// The other module locations should be defined as relative paths from the main model
 	boost::filesystem::path root = boost::filesystem::path(main_location).parent_path();
 
-	// Initializing defaults that could be overwriten
-	detect_Z_max = -1;
-	detect_ROI = cv::Rect_<double>(0, 0, 1, 1);
-
 	// Assume no eye model, unless read-in
 	eye_model = false;
 
@@ -368,9 +357,9 @@ void CLNF::Read(string main_location)
 		lineStream >> location;
 
 		// remove carriage return at the end for compatibility with unix systems
-		if(location.size() > 0 && location.at(location.size()-1) == '\r')
+		if (location.size() > 0 && location.at(location.size() - 1) == '\r')
 		{
-			location = location.substr(0, location.size()-1);
+			location = location.substr(0, location.size() - 1);
 		}
 
 
@@ -383,14 +372,14 @@ void CLNF::Read(string main_location)
 			// The CLNF module includes the PDM and the patch experts
 			Read_CLNF(location);
 		}
-		else if(module.compare("LandmarkDetector_part") == 0)
+		else if (module.compare("LandmarkDetector_part") == 0)
 		{
 			string part_name;
 			lineStream >> part_name;
 			cout << "Reading part based module...." << part_name << endl;
 
 			vector<pair<int, int>> mappings;
-			while(!lineStream.eof())
+			while (!lineStream.eof())
 			{
 				int ind_in_main;
 				lineStream >> ind_in_main;
@@ -413,7 +402,7 @@ void CLNF::Read(string main_location)
 			params.refine_hierarchical = false;
 			params.refine_parameters = false;
 
-			if(part_name.compare("left_eye") == 0 || part_name.compare("right_eye") == 0)
+			if (part_name.compare("left_eye") == 0 || part_name.compare("right_eye") == 0)
 			{
 
 				vector<int> windows_large;
@@ -431,7 +420,7 @@ void CLNF::Read(string main_location)
 				params.reg_factor = 0.1;
 				params.sigma = 2;
 			}
-			else if(part_name.compare("left_eye_28") == 0 || part_name.compare("right_eye_28") == 0)
+			else if (part_name.compare("left_eye_28") == 0 || part_name.compare("right_eye_28") == 0)
 			{
 				vector<int> windows_large;
 				windows_large.push_back(3);
@@ -453,7 +442,7 @@ void CLNF::Read(string main_location)
 				eye_model = true;
 
 			}
-			else if(part_name.compare("mouth") == 0)
+			else if (part_name.compare("mouth") == 0)
 			{
 				vector<int> windows_large;
 				windows_large.push_back(7);
@@ -470,7 +459,7 @@ void CLNF::Read(string main_location)
 				params.reg_factor = 1.0;
 				params.sigma = 2.0;
 			}
-			else if(part_name.compare("brow") == 0)
+			else if (part_name.compare("brow") == 0)
 			{
 				vector<int> windows_large;
 				windows_large.push_back(11);
@@ -487,7 +476,7 @@ void CLNF::Read(string main_location)
 				params.reg_factor = 10.0;
 				params.sigma = 3.5;
 			}
-			else if(part_name.compare("inner") == 0)
+			else if (part_name.compare("inner") == 0)
 			{
 				vector<int> windows_large;
 				windows_large.push_back(9);
@@ -514,25 +503,15 @@ void CLNF::Read(string main_location)
 			landmark_validator.Read(location);
 			cout << "Done" << endl;
 		}
-		else if (module.compare("DetectorConstaints") == 0)
-		{
-			cout << "Reading detectir constraints...";
-			lineStream >> detect_Z_max;
-			lineStream >> detect_ROI.x;
-			lineStream >> detect_ROI.y;
-			lineStream >> detect_ROI.width;
-			lineStream >> detect_ROI.height;
-			cout << "Done" << endl;
-		}
 	}
 
 	detected_landmarks.create(2 * pdm.NumberOfPoints(), 1);
 	detected_landmarks.setTo(0);
 
-	detection_success = false;
+	SetDetectionSuccess(false);
-	tracking_initialised = false;
+	SetInitialized(false);
 	model_likelihood = -10; // very low
-	detection_certainty = 1; // very uncertain
+	detection_certainty = 0; // very uncertain
 
 							 // Initialising default values for the rest of the variables
 
@@ -541,13 +520,31 @@ void CLNF::Read(string main_location)
 	params_local.setTo(0.0);
 
 	// global parameters (pose) [scale, euler_x, euler_y, euler_z, tx, ty]
-	params_global = cv::Vec6d(1, 0, 0, 0, 0, 0);
+	params_global = cv::Vec6d(0, 0, 0, 0, 0, 0);
 
 	failures_in_a_row = -1;
 
-	preference_det.x = -1;
+}
-	preference_det.y = -1;
 
+void CLNF::SetDetectionSuccess(bool success)
+{
+	this->detection_success = success;
+
+	for (size_t i = 0; i < hierarchical_models.size(); ++i)
+	{
+		hierarchical_models[i].SetDetectionSuccess(success);
+	}
+
+}
+
+void CLNF::SetInitialized(bool initialized)
+{
+	this->tracking_initialised = initialized;
+
+	for (size_t i = 0; i < hierarchical_models.size(); ++i)
+	{
+		hierarchical_models[i].SetInitialized(initialized);
+	}
 
 }
 
@@ -556,10 +553,10 @@ void CLNF::Reset()
 {
 	detected_landmarks.setTo(0);
 
-	detection_success = false;
+	SetDetectionSuccess(false);
-	tracking_initialised = false;
+	SetInitialized(false);
 	model_likelihood = -10;  // very low
-	detection_certainty = 1; // very uncertain
+	detection_certainty = 0; // very uncertain
 
 							 // local parameters (shape)
 	params_local.setTo(0.0);
@@ -594,17 +591,12 @@ bool CLNF::DetectLandmarks(const cv::Mat_<uchar> &image, FaceModelParameters& pa
 	// Store the landmarks converged on in detected_landmarks
 	pdm.CalcShape2D(detected_landmarks, params_local, params_global);
 
-	if(params.refine_hierarchical && hierarchical_models.size() > 0)
+	if (params.refine_hierarchical && hierarchical_models.size() > 0)
 	{
 		bool parts_used = false;
 
 		// Do the hierarchical models in parallel
-		tbb::parallel_for(0, (int)hierarchical_models.size(), [&](int part_model){
+		tbb::parallel_for(0, (int)hierarchical_models.size(), [&](int part_model) {
-		{
-			// Only do the synthetic eye models if we're doing gaze
-			if (!((hierarchical_model_names[part_model].compare("right_eye_28") == 0 ||
-			hierarchical_model_names[part_model].compare("left_eye_28") == 0)
-			&& !params.track_gaze))
 			{
 
 				int n_part_points = hierarchical_models[part_model].pdm.NumberOfPoints();
@@ -639,21 +631,16 @@ bool CLNF::DetectLandmarks(const cv::Mat_<uchar> &image, FaceModelParameters& pa
 					hierarchical_models[part_model].pdm.CalcShape2D(hierarchical_models[part_model].detected_landmarks, hierarchical_models[part_model].params_local, hierarchical_models[part_model].params_global);
 				}
 			}
-		}
 		});
 
 		// Recompute main model based on the fit part models
-		if(parts_used)
+		if (parts_used)
 		{
 
 			for (size_t part_model = 0; part_model < hierarchical_models.size(); ++part_model)
 			{
 				vector<pair<int, int>> mappings = this->hierarchical_mapping[part_model];
 
-				if (!((hierarchical_model_names[part_model].compare("right_eye_28") == 0 ||
-					hierarchical_model_names[part_model].compare("left_eye_28") == 0)
-					&& !params.track_gaze))
-				{
 				// Reincorporate the models into main tracker
 				for (size_t mapping_ind = 0; mapping_ind < mappings.size(); ++mapping_ind)
 				{
@@ -661,7 +648,6 @@ bool CLNF::DetectLandmarks(const cv::Mat_<uchar> &image, FaceModelParameters& pa
 					detected_landmarks.at<double>(mappings[mapping_ind].first + pdm.NumberOfPoints()) = hierarchical_models[part_model].detected_landmarks.at<double>(mappings[mapping_ind].second + hierarchical_models[part_model].pdm.NumberOfPoints());
 				}
 			}
-			}
 
 			pdm.CalcParams(params_global, params_local, detected_landmarks);
 			pdm.CalcShape2D(detected_landmarks, params_local, params_global);
@@ -670,24 +656,24 @@ bool CLNF::DetectLandmarks(const cv::Mat_<uchar> &image, FaceModelParameters& pa
 	}
 
 	// Check detection correctness
-	if(params.validate_detections && fit_success)
+	if (params.validate_detections && fit_success)
 	{
 		cv::Vec3d orientation(params_global[1], params_global[2], params_global[3]);
 
 		detection_certainty = landmark_validator.Check(orientation, image, detected_landmarks);
 
-		detection_success = detection_certainty < params.validation_boundary;
+		detection_success = detection_certainty > params.validation_boundary;
 	}
 	else
 	{
 		detection_success = fit_success;
-		if(fit_success)
+		if (fit_success)
 		{
-			detection_certainty = -1;
+			detection_certainty = 1;
 		}
 		else
 		{
-			detection_certainty = 1;
+			detection_certainty = 0;
 		}
 
 	}
@@ -702,7 +688,7 @@ bool CLNF::Fit(const cv::Mat_<uchar>& im, const std::vector<int>& window_sizes,
 	assert(im.channels() == 1);
 
 	// Placeholder for the landmarks
-	cv::Mat_<double> current_shape(2 * pdm.NumberOfPoints() , 1, 0.0);
+	cv::Mat_<double> current_shape(2 * pdm.NumberOfPoints(), 1, 0.0);
 
 	int n = pdm.NumberOfPoints();
 
@@ -718,27 +704,27 @@ bool CLNF::Fit(const cv::Mat_<uchar>& im, const std::vector<int>& window_sizes,
 	FaceModelParameters tmp_parameters = parameters;
 
 	// Optimise the model across a number of areas of interest (usually in descending window size and ascending scale size)
-	for(int scale = 0; scale < num_scales; scale++)
+	for (int scale = 0; scale < num_scales; scale++)
 	{
 
 		int window_size = window_sizes[scale];
 
-		if(window_size == 0 ||  0.9 * patch_experts.patch_scaling[scale] > params_global[0])
+		if (window_size == 0 || 0.9 * patch_experts.patch_scaling[scale] > params_global[0])
 			continue;
 
 		// The patch expert response computation
 		patch_experts.Response(patch_expert_responses, sim_ref_to_img, sim_img_to_ref, im, pdm, params_global, params_local, window_size, scale);
 
-		if(parameters.refine_parameters == true)
+		if (parameters.refine_parameters == true)
 		{
 			// Adapt the parameters based on scale (wan't to reduce regularisation as scale increases, but increa sigma and tikhonov)
-			tmp_parameters.reg_factor = parameters.reg_factor - 15 * log(patch_experts.patch_scaling[scale]/0.25)/log(2);
+			tmp_parameters.reg_factor = parameters.reg_factor - 15 * log(patch_experts.patch_scaling[scale] / 0.25) / log(2);
 
-			if(tmp_parameters.reg_factor <= 0)
+			if (tmp_parameters.reg_factor <= 0)
 				tmp_parameters.reg_factor = 0.001;
 
-			tmp_parameters.sigma = parameters.sigma + 0.25 * log(patch_experts.patch_scaling[scale]/0.25)/log(2);
+			tmp_parameters.sigma = parameters.sigma + 0.25 * log(patch_experts.patch_scaling[scale] / 0.25) / log(2);
-			tmp_parameters.weight_factor = parameters.weight_factor + 2 * parameters.weight_factor *  log(patch_experts.patch_scaling[scale]/0.25)/log(2);
+			tmp_parameters.weight_factor = parameters.weight_factor + 2 * parameters.weight_factor *  log(patch_experts.patch_scaling[scale] / 0.25) / log(2);
 		}
 
 		// Get the current landmark locations
@@ -754,7 +740,7 @@ bool CLNF::Fit(const cv::Mat_<uchar>& im, const std::vector<int>& window_sizes,
 		this->model_likelihood = this->NU_RLMS(params_global, params_local, patch_expert_responses, cv::Vec6d(params_global), params_local.clone(), current_shape, sim_img_to_ref, sim_ref_to_img, window_size, view_id, false, scale, this->landmark_likelihoods, tmp_parameters);
 
 		// Can't track very small images reliably (less than ~30px across)
-		if(params_global[0] < 0.25)
+		if (params_global[0] < 0.25)
 		{
 			cout << "Face too small for landmark detection" << endl;
 			return false;
@@ -773,30 +759,30 @@ void CLNF::NonVectorisedMeanShift_precalc_kde(cv::Mat_<float>& out_mean_shifts,
 	float step_size = 0.1;
 
 	// if this has not been precomputer, precompute it, otherwise use it
-	if(kde_resp_precalc.find(resp_size) == kde_resp_precalc.end())
+	if (kde_resp_precalc.find(resp_size) == kde_resp_precalc.end())
 	{
-		kde_resp = cv::Mat_<float>((int)((resp_size / step_size)*(resp_size/step_size)), resp_size * resp_size);
+		kde_resp = cv::Mat_<float>((int)((resp_size / step_size)*(resp_size / step_size)), resp_size * resp_size);
 		cv::MatIterator_<float> kde_it = kde_resp.begin();
 
-		for(int x = 0; x < resp_size/step_size; x++)
+		for (int x = 0; x < resp_size / step_size; x++)
 		{
 			float dx = x * step_size;
-			for(int y = 0; y < resp_size/step_size; y++)
+			for (int y = 0; y < resp_size / step_size; y++)
 			{
 				float dy = y * step_size;
 
-				int ii,jj;
+				int ii, jj;
-				float v,vx,vy;
+				float v, vx, vy;
 
-				for(ii = 0; ii < resp_size; ii++)
+				for (ii = 0; ii < resp_size; ii++)
 				{
-					vx = (dy-ii)*(dy-ii);
+					vx = (dy - ii)*(dy - ii);
-					for(jj = 0; jj < resp_size; jj++)
+					for (jj = 0; jj < resp_size; jj++)
 					{
-						vy = (dx-jj)*(dx-jj);
+						vy = (dx - jj)*(dx - jj);
 
 						// the KDE evaluation of that point
-						v = exp(a*(vx+vy));
+						v = exp(a*(vx + vy));
 
 						*kde_it++ = v;
 					}
@@ -813,12 +799,12 @@ void CLNF::NonVectorisedMeanShift_precalc_kde(cv::Mat_<float>& out_mean_shifts,
 	}
 
 	// for every point (patch) calculating mean-shift
-	for(int i = 0; i < n; i++)
+	for (int i = 0; i < n; i++)
 	{
-		if(patch_experts.visibilities[scale][view_id].at<int>(i,0) == 0)
+		if (patch_experts.visibilities[scale][view_id].at<int>(i, 0) == 0)
 		{
-			out_mean_shifts.at<float>(i,0) = 0;
+			out_mean_shifts.at<float>(i, 0) = 0;
-			out_mean_shifts.at<float>(i+n,0) = 0;
+			out_mean_shifts.at<float>(i + n, 0) = 0;
 			continue;
 		}
 
@@ -827,33 +813,33 @@ void CLNF::NonVectorisedMeanShift_precalc_kde(cv::Mat_<float>& out_mean_shifts,
 		float dy = dys.at<float>(i);
 
 		// Ensure that we are within bounds (important for precalculation)
-		if(dx < 0)
+		if (dx < 0)
 			dx = 0;
-		if(dy < 0)
+		if (dy < 0)
 			dy = 0;
-		if(dx > resp_size - step_size)
+		if (dx > resp_size - step_size)
 			dx = resp_size - step_size;
-		if(dy > resp_size - step_size)
+		if (dy > resp_size - step_size)
 			dy = resp_size - step_size;
 
 		// Pick the row from precalculated kde that approximates the current dx, dy best		
-		int closest_col = (int)(dy /step_size + 0.5); // Plus 0.5 is there, as C++ rounds down with int cast
+		int closest_col = (int)(dy / step_size + 0.5); // Plus 0.5 is there, as C++ rounds down with int cast
-		int closest_row = (int)(dx /step_size + 0.5); // Plus 0.5 is there, as C++ rounds down with int cast
+		int closest_row = (int)(dx / step_size + 0.5); // Plus 0.5 is there, as C++ rounds down with int cast
 
-		int idx = closest_row * ((int)(resp_size/step_size + 0.5)) + closest_col; // Plus 0.5 is there, as C++ rounds down with int cast
+		int idx = closest_row * ((int)(resp_size / step_size + 0.5)) + closest_col; // Plus 0.5 is there, as C++ rounds down with int cast
 
 		cv::MatIterator_<float> kde_it = kde_resp.begin() + kde_resp.cols*idx;
 
-		float mx=0.0;
+		float mx = 0.0;
-		float my=0.0;
+		float my = 0.0;
-		float sum=0.0;
+		float sum = 0.0;
 
 		// Iterate over the patch responses here
 		cv::MatConstIterator_<float> p = patch_expert_responses[i].begin();
 
-		for(int ii = 0; ii < resp_size; ii++)
+		for (int ii = 0; ii < resp_size; ii++)
 		{
-			for(int jj = 0; jj < resp_size; jj++)
+			for (int jj = 0; jj < resp_size; jj++)
 			{
 
 				// the KDE evaluation of that point multiplied by the probability at the current, xi, yi
@@ -868,11 +854,11 @@ void CLNF::NonVectorisedMeanShift_precalc_kde(cv::Mat_<float>& out_mean_shifts,
 			}
 		}
 
-		float msx = (mx/sum - dx);
+		float msx = (mx / sum - dx);
-		float msy = (my/sum - dy);
+		float msy = (my / sum - dy);
 
-		out_mean_shifts.at<float>(i,0) = msx;
+		out_mean_shifts.at<float>(i, 0) = msx;
-		out_mean_shifts.at<float>(i+n,0) = msy;
+		out_mean_shifts.at<float>(i + n, 0) = msy;
 
 	}
 
@@ -883,39 +869,39 @@ void CLNF::GetWeightMatrix(cv::Mat_<float>& WeightMatrix, int scale, int view_id
 	int n = pdm.NumberOfPoints();
 
 	// Is the weight matrix needed at all
-	if(parameters.weight_factor > 0)
+	if (parameters.weight_factor > 0)
 	{
-		WeightMatrix = cv::Mat_<float>::zeros(n*2, n*2);
+		WeightMatrix = cv::Mat_<float>::zeros(n * 2, n * 2);
 
-		for (int p=0; p < n; p++)
+		for (int p = 0; p < n; p++)
 		{
-			if(!patch_experts.ccnf_expert_intensity.empty())
+			if (!patch_experts.ccnf_expert_intensity.empty())
 			{
 
 				// for the x dimension
-				WeightMatrix.at<float>(p,p) = WeightMatrix.at<float>(p,p)  + patch_experts.ccnf_expert_intensity[scale][view_id][p].patch_confidence;
+				WeightMatrix.at<float>(p, p) = WeightMatrix.at<float>(p, p) + patch_experts.ccnf_expert_intensity[scale][view_id][p].patch_confidence;
 
 				// for they y dimension
-				WeightMatrix.at<float>(p+n,p+n) = WeightMatrix.at<float>(p,p);
+				WeightMatrix.at<float>(p + n, p + n) = WeightMatrix.at<float>(p, p);
 
 			}
 			else
 			{
 				// Across the modalities add the confidences
-				for(size_t pc=0; pc < patch_experts.svr_expert_intensity[scale][view_id][p].svr_patch_experts.size(); pc++)
+				for (size_t pc = 0; pc < patch_experts.svr_expert_intensity[scale][view_id][p].svr_patch_experts.size(); pc++)
 				{
 					// for the x dimension
-					WeightMatrix.at<float>(p,p) = WeightMatrix.at<float>(p,p)  + patch_experts.svr_expert_intensity[scale][view_id][p].svr_patch_experts.at(pc).confidence;
+					WeightMatrix.at<float>(p, p) = WeightMatrix.at<float>(p, p) + patch_experts.svr_expert_intensity[scale][view_id][p].svr_patch_experts.at(pc).confidence;
 				}
 				// for the y dimension
-				WeightMatrix.at<float>(p+n,p+n) = WeightMatrix.at<float>(p,p);
+				WeightMatrix.at<float>(p + n, p + n) = WeightMatrix.at<float>(p, p);
 			}
 		}
 		WeightMatrix = parameters.weight_factor * WeightMatrix;
 	}
 	else
 	{
-		WeightMatrix = cv::Mat_<float>::eye(n*2, n*2);
+		WeightMatrix = cv::Mat_<float>::eye(n * 2, n * 2);
 	}
 
 }
@@ -946,9 +932,9 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 	// Pre-calculate the regularisation term
 	cv::Mat_<float> regTerm;
 
-	if(rigid)
+	if (rigid)
 	{
-		regTerm = cv::Mat_<float>::zeros(6,6);
+		regTerm = cv::Mat_<float>::zeros(6, 6);
 	}
 	else
 	{
@@ -969,15 +955,15 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 	cv::Mat_<float> mean_shifts(2 * pdm.NumberOfPoints(), 1, 0.0);
 
 	// Number of iterations
-	for(int iter = 0; iter < parameters.num_optimisation_iteration; iter++)
+	for (int iter = 0; iter < parameters.num_optimisation_iteration; iter++)
 	{
 		// get the current estimates of x
 		pdm.CalcShape2D(current_shape, current_local, current_global);
 
-		if(iter > 0)
+		if (iter > 0)
 		{
 			// if the shape hasn't changed terminate
-			if(norm(current_shape, previous_shape) < 0.01)
+			if (norm(current_shape, previous_shape) < 0.01)
 			{
 				break;
 			}
@@ -989,7 +975,7 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 		cv::Mat_<float> J, J_w_t;
 
 		// calculate the appropriate Jacobians in 2D, even though the actual behaviour is in 3D, using small angle approximation and oriented shape
-		if(rigid)
+		if (rigid)
 		{
 			pdm.ComputeRigidJacobian(current_local, current_global, J, WeightMatrix, J_w_t);
 		}
@@ -999,7 +985,7 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 		}
 
 		// useful for mean shift calculation
-		float a = -0.5/(parameters.sigma * parameters.sigma);
+		float a = -0.5 / (parameters.sigma * parameters.sigma);
 
 		cv::Mat_<double> current_shape_2D = current_shape.reshape(1, 2).t();
 		cv::Mat_<double> base_shape_2D = base_shape.reshape(1, 2).t();
@@ -1007,8 +993,8 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 		cv::Mat_<float> offsets;
 		cv::Mat((current_shape_2D - base_shape_2D) * cv::Mat(sim_img_to_ref).t()).convertTo(offsets, CV_32F);
 
-		dxs = offsets.col(0) + (resp_size-1)/2;
+		dxs = offsets.col(0) + (resp_size - 1) / 2;
-		dys = offsets.col(1) + (resp_size-1)/2;
+		dys = offsets.col(1) + (resp_size - 1) / 2;
 
 		NonVectorisedMeanShift_precalc_kde(mean_shifts, patch_expert_responses, dxs, dys, resp_size, a, scale, view_id, kde_resp_precalc);
 
@@ -1016,20 +1002,20 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 		cv::Mat_<float> mean_shifts_2D = (mean_shifts.reshape(1, 2)).t();
 
 		mean_shifts_2D = mean_shifts_2D * cv::Mat(sim_ref_to_img).t();
-		mean_shifts = cv::Mat(mean_shifts_2D.t()).reshape(1, n*2);
+		mean_shifts = cv::Mat(mean_shifts_2D.t()).reshape(1, n * 2);
 
 		// remove non-visible observations
-		for(int i = 0; i < n; ++i)
+		for (int i = 0; i < n; ++i)
 		{
 			// if patch unavailable for current index
-			if(patch_experts.visibilities[scale][view_id].at<int>(i,0) == 0)
+			if (patch_experts.visibilities[scale][view_id].at<int>(i, 0) == 0)
 			{
 				cv::Mat Jx = J.row(i);
 				Jx = cvScalar(0);
-				cv::Mat Jy = J.row(i+n);
+				cv::Mat Jy = J.row(i + n);
 				Jy = cvScalar(0);
-				mean_shifts.at<float>(i,0) = 0.0f;
+				mean_shifts.at<float>(i, 0) = 0.0f;
-				mean_shifts.at<float>(i+n,0) = 0.0f;
+				mean_shifts.at<float>(i + n, 0) = 0.0f;
 			}
 		}
 
@@ -1037,9 +1023,9 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 		cv::Mat_<float> J_w_t_m = J_w_t * mean_shifts;
 
 		// Add the regularisation term
-		if(!rigid)
+		if (!rigid)
 		{
-			J_w_t_m(cv::Rect(0,6,1, m)) = J_w_t_m(cv::Rect(0,6,1, m)) - regTerm(cv::Rect(6,6, m, m)) * current_local;
+			J_w_t_m(cv::Rect(0, 6, 1, m)) = J_w_t_m(cv::Rect(0, 6, 1, m)) - regTerm(cv::Rect(6, 6, m, m)) * current_local;
 		}
 
 		// Calculating the Hessian approximation
@@ -1065,45 +1051,45 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 
 	landmark_lhoods = cv::Mat_<double>(n, 1, -1e8);
 
-	for(int i = 0; i < n; i++)
+	for (int i = 0; i < n; i++)
 	{
 
-		if(patch_experts.visibilities[scale][view_id].at<int>(i,0) == 0 )
+		if (patch_experts.visibilities[scale][view_id].at<int>(i, 0) == 0)
 		{
 			continue;
 		}
 		float dx = dxs.at<float>(i);
 		float dy = dys.at<float>(i);
 
-		int ii,jj;
+		int ii, jj;
-		float v,vx,vy,sum=0.0;
+		float v, vx, vy, sum = 0.0;
 
 		// Iterate over the patch responses here
 		cv::MatConstIterator_<float> p = patch_expert_responses[i].begin();
 
-		for(ii = 0; ii < resp_size; ii++)
+		for (ii = 0; ii < resp_size; ii++)
 		{
-			vx = (dy-ii)*(dy-ii);
+			vx = (dy - ii)*(dy - ii);
-			for(jj = 0; jj < resp_size; jj++)
+			for (jj = 0; jj < resp_size; jj++)
 			{
-				vy = (dx-jj)*(dx-jj);
+				vy = (dx - jj)*(dx - jj);
 
 				// the probability at the current, xi, yi
 				v = *p++;
 
 				// the KDE evaluation of that point
-				v *= exp(-0.5*(vx+vy)/(parameters.sigma * parameters.sigma));
+				v *= exp(-0.5*(vx + vy) / (parameters.sigma * parameters.sigma));
 
 				sum += v;
 			}
 		}
-		landmark_lhoods.at<double>(i,0) = (double)sum;
+		landmark_lhoods.at<double>(i, 0) = (double)sum;
 
 		// the offset is there for numerical stability
 		loglhood += log(sum + 1e-8);
 
 	}
-	loglhood = loglhood/sum(patch_experts.visibilities[scale][view_id])[0];
+	loglhood = loglhood / sum(patch_experts.visibilities[scale][view_id])[0];
 
 	final_global = current_global;
 	final_local = current_local;
@@ -1115,16 +1101,22 @@ double CLNF::NU_RLMS(cv::Vec6d& final_global, cv::Mat_<double>& final_local, con
 // Getting a 3D shape model from the current detected landmarks (in camera space)
 cv::Mat_<double> CLNF::GetShape(double fx, double fy, double cx, double cy) const
 {
-	int n = this->detected_landmarks.rows/2;
+	int n = this->detected_landmarks.rows / 2;
 
-	cv::Mat_<double> shape3d(n*3, 1);
+	cv::Mat_<double> outShape(n, 3, 0.0);
+
+	// If the tracking started (otherwise no point reporting 3D shape)
+	if (this->IsInitialized())
+	{
+
+		cv::Mat_<double> shape3d(n * 3, 1);
 
 		this->pdm.CalcShape3D(shape3d, this->params_local);
 
 		// Need to rotate the shape to get the actual 3D representation
 
 		// get the rotation matrix from the euler angles
-	cv::Matx33d R = LandmarkDetector::Euler2RotationMatrix(cv::Vec3d(params_global[1], params_global[2], params_global[3]));
+		cv::Matx33d R = Utilities::Euler2RotationMatrix(cv::Vec3d(params_global[1], params_global[2], params_global[3]));
 
 		shape3d = shape3d.reshape(1, 3);
 
@@ -1133,21 +1125,21 @@ cv::Mat_<double> CLNF::GetShape(double fx, double fy, double cx, double cy) cons
 		// from the weak perspective model can determine the average depth of the object
 		double Zavg = fx / params_global[0];
 
-	cv::Mat_<double> outShape(n,3,0.0);
 
 		// this is described in the paper in section 3.4 (equation 10) (of the CLM-Z paper)
-	for(int i = 0; i < n; i++)
+		for (int i = 0; i < n; i++)
 		{
-		double Z = Zavg + shape3d.at<double>(i,2);
+			double Z = Zavg + shape3d.at<double>(i, 2);
 
-		double X = Z * ((this->detected_landmarks.at<double>(i) - cx)/fx);
+			double X = Z * ((this->detected_landmarks.at<double>(i) - cx) / fx);
-		double Y = Z * ((this->detected_landmarks.at<double>(i + n) - cy)/fy);
+			double Y = Z * ((this->detected_landmarks.at<double>(i + n) - cy) / fy);
 
-		outShape.at<double>(i,0) = (double)X;
+			outShape.at<double>(i, 0) = (double)X;
-		outShape.at<double>(i,1) = (double)Y;
+			outShape.at<double>(i, 1) = (double)Y;
-		outShape.at<double>(i,2) = (double)Z;
+			outShape.at<double>(i, 2) = (double)Z;
 
 		}
+	}
 
 	// The format is 3 rows - n cols
 	return outShape.t();
@@ -1157,8 +1149,8 @@ cv::Mat_<double> CLNF::GetShape(double fx, double fy, double cx, double cy) cons
 // A utility bounding box function
 cv::Rect_<double> CLNF::GetBoundingBox() const
 {
-	cv::Mat_<double> xs = this->detected_landmarks(cv::Rect(0,0,1,this->detected_landmarks.rows/2));
+	cv::Mat_<double> xs = this->detected_landmarks(cv::Rect(0, 0, 1, this->detected_landmarks.rows / 2));
-	cv::Mat_<double> ys = this->detected_landmarks(cv::Rect(0,this->detected_landmarks.rows/2, 1, this->detected_landmarks.rows/2));
+	cv::Mat_<double> ys = this->detected_landmarks(cv::Rect(0, this->detected_landmarks.rows / 2, 1, this->detected_landmarks.rows / 2));
 
 	double min_x, max_x;
 	double min_y, max_y;
@@ -1176,13 +1168,13 @@ void CLNF::NonVectorisedMeanShift(cv::Mat_<double>& out_mean_shifts, const vecto
 
 	int n = dxs.rows;
 
-	for(int i = 0; i < n; i++)
+	for (int i = 0; i < n; i++)
 	{
 
-		if(patch_experts.visibilities[scale][view_id].at<int>(i,0) == 0  || sum(patch_expert_responses[i])[0] == 0)
+		if (patch_experts.visibilities[scale][view_id].at<int>(i, 0) == 0 || sum(patch_expert_responses[i])[0] == 0)
 		{
-			out_mean_shifts.at<double>(i,0) = 0;
+			out_mean_shifts.at<double>(i, 0) = 0;
-			out_mean_shifts.at<double>(i+n,0) = 0;
+			out_mean_shifts.at<double>(i + n, 0) = 0;
 			continue;
 		}
 
@@ -1190,24 +1182,24 @@ void CLNF::NonVectorisedMeanShift(cv::Mat_<double>& out_mean_shifts, const vecto
 		double dx = dxs.at<double>(i);
 		double dy = dys.at<double>(i);
 
-		int ii,jj;
+		int ii, jj;
-		double v,vx,vy,mx=0.0,my=0.0,sum=0.0;
+		double v, vx, vy, mx = 0.0, my = 0.0, sum = 0.0;
 
 		// Iterate over the patch responses here
 		cv::MatConstIterator_<float> p = patch_expert_responses[i].begin();
 
-		for(ii = 0; ii < resp_size; ii++)
+		for (ii = 0; ii < resp_size; ii++)
 		{
-			vx = (dy-ii)*(dy-ii);
+			vx = (dy - ii)*(dy - ii);
-			for(jj = 0; jj < resp_size; jj++)
+			for (jj = 0; jj < resp_size; jj++)
 			{
-				vy = (dx-jj)*(dx-jj);
+				vy = (dx - jj)*(dx - jj);
 
 				// the probability at the current, xi, yi
 				v = *p++;
 
 				// the KDE evaluation of that point
-				double kd = exp(a*(vx+vy));
+				double kd = exp(a*(vx + vy));
 				v *= kd;
 
 				sum += v;
@@ -1220,8 +1212,8 @@ void CLNF::NonVectorisedMeanShift(cv::Mat_<double>& out_mean_shifts, const vecto
 		}
 
 		// setting the actual mean shift update
-		double msx = (mx/sum - dx);
+		double msx = (mx / sum - dx);
-		double msy = (my/sum - dy);
+		double msy = (my / sum - dy);
 
 		out_mean_shifts.at<double>(i, 0) = msx;
 		out_mean_shifts.at<double>(i + n, 0) = msy;

lib/local/LandmarkDetector/src/LandmarkDetectorParameters.cpp

@@ -148,12 +148,6 @@ FaceModelParameters::FaceModelParameters(vector<string> &arguments)
 			valid[i + 1] = false;
 			i++;
 		}
-		else if (arguments[i].compare("-gaze") == 0)
-		{
-			track_gaze = true;
-
-			valid[i] = false;
-		}
 		else if (arguments[i].compare("-q") == 0)
 		{
 
@@ -253,7 +247,7 @@ void FaceModelParameters::init()
 	reg_factor = 25;
 	weight_factor = 0; // By default do not use NU-RLMS for videos as it does not work as well for them
 
-	validation_boundary = -0.45;
+	validation_boundary = 0.725;
 
 	limit_pose = true;
 	multi_view = false;
@@ -267,7 +261,5 @@ void FaceModelParameters::init()
 	// By default use HOG SVM
 	curr_face_detector = HOG_SVM_DETECTOR;
 
-	// The gaze tracking has to be explicitly initialised
-	track_gaze = false;
 }
 

lib/local/LandmarkDetector/src/PDM.cpp

@@ -49,6 +49,7 @@
 #endif
 
 #include <LandmarkDetectorUtils.h>
+#include "RotationHelpers.h"
 
 using namespace LandmarkDetector;
 //===========================================================================
@@ -154,7 +155,7 @@ void PDM::CalcShape2D(cv::Mat_<double>& out_shape, const cv::Mat_<double>& param
 
 	// get the rotation matrix from the euler angles
 	cv::Vec3d euler(params_global[1], params_global[2], params_global[3]);
-	cv::Matx33d currRot = Euler2RotationMatrix(euler);
+	cv::Matx33d currRot = Utilities::Euler2RotationMatrix(euler);
 	
 	// get the 3D shape of the object
 	cv::Mat_<double> Shape_3D = mean_shape + princ_comp * params_local;
@@ -185,7 +186,7 @@ void PDM::CalcParams(cv::Vec6d& out_params_global, const cv::Rect_<double>& boun
 	CalcShape3D(current_shape, params_local);
 
 	// rotate the shape
-	cv::Matx33d rotation_matrix = Euler2RotationMatrix(rotation);
+	cv::Matx33d rotation_matrix = Utilities::Euler2RotationMatrix(rotation);
 
 	cv::Mat_<double> reshaped = current_shape.reshape(1, 3);
 
@@ -265,7 +266,7 @@ void PDM::ComputeRigidJacobian(const cv::Mat_<float>& p_local, const cv::Vec6d&
 
 	 // Get the rotation matrix
 	cv::Vec3d euler(params_global[1], params_global[2], params_global[3]);
-	cv::Matx33d currRot = Euler2RotationMatrix(euler);
+	cv::Matx33d currRot = Utilities::Euler2RotationMatrix(euler);
 	
 	float r11 = (float) currRot(0,0);
 	float r12 = (float) currRot(0,1);
@@ -363,7 +364,7 @@ void PDM::ComputeJacobian(const cv::Mat_<float>& params_local, const cv::Vec6d&
 	shape_3D_d.convertTo(shape_3D, CV_32F);
 
 	cv::Vec3d euler(params_global[1], params_global[2], params_global[3]);
-	cv::Matx33d currRot = Euler2RotationMatrix(euler);
+	cv::Matx33d currRot = Utilities::Euler2RotationMatrix(euler);
 	
 	float r11 = (float) currRot(0,0);
 	float r12 = (float) currRot(0,1);
@@ -460,7 +461,7 @@ void PDM::UpdateModelParameters(const cv::Mat_<float>& delta_p, cv::Mat_<float>&
 
 	// get the original rotation matrix	
 	cv::Vec3d eulerGlobal(params_global[1], params_global[2], params_global[3]);
-	cv::Matx33d R1 = Euler2RotationMatrix(eulerGlobal);
+	cv::Matx33d R1 = Utilities::Euler2RotationMatrix(eulerGlobal);
 
 	// construct R' = [1, -wz, wy
 	//               wz, 1, -wx
@@ -478,8 +479,8 @@ void PDM::UpdateModelParameters(const cv::Mat_<float>& delta_p, cv::Mat_<float>&
 	cv::Matx33d R3 = R1 *R2;
 
 	// Extract euler angle (through axis angle first to make sure it's legal)
-	cv::Vec3d axis_angle = RotationMatrix2AxisAngle(R3);
+	cv::Vec3d axis_angle = Utilities::RotationMatrix2AxisAngle(R3);
-	cv::Vec3d euler = AxisAngle2Euler(axis_angle);
+	cv::Vec3d euler = Utilities::AxisAngle2Euler(axis_angle);
 
 	params_global[1] = euler[0];
 	params_global[2] = euler[1];
@@ -569,7 +570,7 @@ void PDM::CalcParams(cv::Vec6d& out_params_global, cv::Mat_<double>& out_params_
 	double scaling = ((width / model_bbox.width) + (height / model_bbox.height)) / 2;
         
 	cv::Vec3d rotation_init = rotation;
-	cv::Matx33d R = Euler2RotationMatrix(rotation_init);
+	cv::Matx33d R = Utilities::Euler2RotationMatrix(rotation_init);
 	cv::Vec2d translation((min_x + max_x) / 2.0, (min_y + max_y) / 2.0);
     
 	cv::Mat_<float> loc_params(this->NumberOfModes(),1, 0.0);
@@ -656,7 +657,7 @@ void PDM::CalcParams(cv::Vec6d& out_params_global, cv::Mat_<double>& out_params_
 		translation[0] = glob_params[4];
 		translation[1] = glob_params[5];
         
-		R = Euler2RotationMatrix(rotation_init);
+		R = Utilities::Euler2RotationMatrix(rotation_init);
 
 		R_2D(0,0) = R(0,0);R_2D(0,1) = R(0,1); R_2D(0,2) = R(0,2);
 		R_2D(1,0) = R(1,0);R_2D(1,1) = R(1,1); R_2D(1,2) = R(1,2); 

lib/local/Utilities/CMakeLists.txt

@@ -0,0 +1,31 @@
+include_directories(${BOOST_INCLUDE_DIR})
+
+SET(SOURCE
+    src/ImageCapture.cpp
+	src/RecorderCSV.cpp
+    src/RecorderHOG.cpp
+	src/RecorderOpenFace.cpp
+    src/RecorderOpenFaceParameters.cpp
+	src/SequenceCapture.cpp
+	src/VisualizationUtils.cpp
+	src/Visualizer.cpp
+)
+
+SET(HEADERS
+    include/ImageCapture.h	
+    include/RecorderCSV.h
+	include/RecorderHOG.h
+    include/RecorderOpenFace.h
+	include/RecorderOpenFaceParameters.h
+	include/SequenceCapture.h
+	include/VisualizationUtils.h
+	include/Visualizer.h	
+)
+
+include_directories(./include)
+include_directories(${UTILITIES_SOURCE_DIR}/include)
+
+add_library( Utilities ${SOURCE} ${HEADERS})
+
+install (TARGETS Utilities DESTINATION lib)
+install (FILES ${HEADERS} DESTINATION include/OpenFace)

lib/local/Utilities/Utilities.vcxproj

@@ -0,0 +1,183 @@
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lib/local/Utilities/Utilities.vcxproj.filters

@@ -0,0 +1,75 @@
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+    <ClCompile Include="src\RecorderCSV.cpp">
+      <Filter>Source Files</Filter>
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+      <Filter>Source Files</Filter>
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+    <ClCompile Include="src\RecorderOpenFace.cpp">
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+    <ClCompile Include="src\RecorderOpenFaceParameters.cpp">
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+      <Filter>Source Files</Filter>
+    </ClCompile>
+    <ClCompile Include="src\VisualizationUtils.cpp">
+      <Filter>Source Files</Filter>
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+      <Filter>Source Files</Filter>
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+      <Filter>Header Files</Filter>
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+    <ClInclude Include="include\RecorderOpenFace.h">
+      <Filter>Header Files</Filter>
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+      <Filter>Header Files</Filter>
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+</Project>

lib/local/Utilities/include/ImageCapture.h

@@ -0,0 +1,121 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __IMAGE_CAPTURE_h_
+#define __IMAGE_CAPTURE_h_
+
+// System includes
+#include <fstream>
+#include <sstream>
+#include <vector>
+
+// OpenCV includes
+#include <opencv2/core/core.hpp>
+#include <opencv2/highgui/highgui.hpp>
+
+namespace Utilities
+{
+
+	//===========================================================================
+	/**
+	A class for capturing sequences from video, webcam, and image directories
+	*/
+	class ImageCapture {
+
+	public:
+
+		// Default constructor
+		ImageCapture() {};
+
+		// Opening based on command line arguments
+		bool Open(std::vector<std::string>& arguments);
+
+		// Direct opening
+
+		// Image sequence in the directory
+		bool OpenDirectory(std::string directory, std::string bbox_directory="", float fx = -1, float fy = -1, float cx = -1, float cy = -1);
+
+		// Video file
+		bool OpenImageFiles(const std::vector<std::string>& image_files, float fx = -1, float fy = -1, float cx = -1, float cy = -1);
+
+		// Getting the next frame
+		cv::Mat GetNextImage();
+
+		// Getting the most recent grayscale frame (need to call GetNextImage first)
+		cv::Mat_<uchar> GetGrayFrame();
+
+		// Return bounding boxes associated with the image (if defined)
+		std::vector<cv::Rect_<double> > GetBoundingBoxes();
+
+		// Parameters describing the sequence and it's progress (what's the proportion of images opened)
+		double GetProgress();
+
+		int image_width;
+		int image_height;
+
+		float fx, fy, cx, cy;
+
+		// Name of the video file, image directory, or the webcam
+		std::string name;
+
+		bool has_bounding_boxes;
+
+	private:
+
+		// Blocking copy and move, as it doesn't make sense to have several readers pointed at the same source
+		ImageCapture & operator= (const ImageCapture& other);
+		ImageCapture & operator= (const ImageCapture&& other);
+		ImageCapture(const ImageCapture&& other);
+		ImageCapture(const ImageCapture& other);
+
+		// Storing the latest captures
+		cv::Mat latest_frame;
+		cv::Mat_<uchar> latest_gray_frame;
+
+		// Keeping track of how many files are read and the filenames
+		size_t  frame_num;
+		std::vector<std::string> image_files;
+
+		// Could optionally read the bounding box locations from files (each image could have multiple bounding boxes)
+		std::vector<std::vector<cv::Rect_<double> > > bounding_boxes;
+
+		void SetCameraIntrinsics(float fx, float fy, float cx, float cy);
+
+		bool image_focal_length_set;
+		bool image_optical_center_set;
+
+		bool no_input_specified;
+
+	};
+}
+#endif

lib/local/Utilities/include/ImageManipulationHelpers.h

@@ -0,0 +1,91 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __IMAGE_MANIPULATION_HELPERS_h_
+#define __IMAGE_MANIPULATION_HELPERS_h_
+
+#include <opencv2/core/core.hpp>
+#include <opencv2/imgproc.hpp>
+
+namespace Utilities
+{
+	//===========================================================================
+	// Converting between color spaces and bit depths
+	//===========================================================================
+
+	static void ConvertToGrayscale_8bit(const cv::Mat& in, cv::Mat& out)
+	{
+		if (in.channels() == 3)
+		{
+			// Make sure it's in a correct format
+			if (in.depth() == CV_16U)
+			{
+				cv::Mat tmp = in / 256;
+				tmp.convertTo(out, CV_8U);
+				cv::cvtColor(out, out, CV_BGR2GRAY);
+			}
+			else
+			{
+				cv::cvtColor(in, out, CV_BGR2GRAY);
+			}
+		}
+		else if (in.channels() == 4)
+		{
+			if (in.depth() == CV_16U)
+			{
+				cv::Mat tmp = in / 256;
+				tmp.convertTo(out, CV_8U);
+				cv::cvtColor(out, out, CV_BGRA2GRAY);
+			}
+			else
+			{
+				cv::cvtColor(in, out, CV_BGRA2GRAY);
+			}
+		}
+		else
+		{
+			if (in.depth() == CV_16U)
+			{
+				cv::Mat tmp = in / 256;
+				tmp.convertTo(out, CV_8U);
+			}
+			else if (in.depth() == CV_8U)
+			{
+				out = in.clone();
+			}
+		}
+	}
+
+
+}
+#endif

lib/local/Utilities/include/RecorderCSV.h

@@ -0,0 +1,98 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __RECORDER_CSV_h_
+#define __RECORDER_CSV_h_
+
+// System includes
+#include <fstream>
+#include <sstream>
+#include <vector>
+
+// OpenCV includes
+#include <opencv2/core/core.hpp>
+
+namespace Utilities
+{
+
+	//===========================================================================
+	/**
+	A class for recording CSV file from OpenFace
+	*/
+	class RecorderCSV {
+
+	public:
+
+		// The constructor for the recorder, need to specify if we are recording a sequence or not
+		RecorderCSV();
+
+		// Opening the file and preparing the header for it
+		bool Open(std::string output_file_name, bool is_sequence, bool output_2D_landmarks, bool output_3D_landmarks, bool output_model_params, bool output_pose, bool output_AUs, bool output_gaze,
+			int num_face_landmarks, int num_model_modes, int num_eye_landmarks, const std::vector<std::string>& au_names_class, const std::vector<std::string>& au_names_reg);
+
+		// Closing the file and cleaning up
+		void Close();
+
+		void WriteLine(int observation_count, double time_stamp, bool landmark_detection_success, double landmark_confidence,
+			const cv::Mat_<double>& landmarks_2D, const cv::Mat_<double>& landmarks_3D, const cv::Mat_<double>& pdm_model_params, const cv::Vec6d& rigid_shape_params, cv::Vec6d& pose_estimate,
+			const cv::Point3f& gazeDirection0, const cv::Point3f& gazeDirection1, const cv::Vec2d& gaze_angle, const std::vector<cv::Point2d>& eye_landmarks2d, const std::vector<cv::Point3d>& eye_landmarks3d,
+			const std::vector<std::pair<std::string, double> >& au_intensities, const std::vector<std::pair<std::string, double> >& au_occurences);
+
+	private:
+
+		// Blocking copy and move, as it doesn't make sense to read to write to the same file
+		RecorderCSV & operator= (const RecorderCSV& other);
+		RecorderCSV & operator= (const RecorderCSV&& other);
+		RecorderCSV(const RecorderCSV&& other);
+		RecorderCSV(const RecorderCSV& other);
+
+		// The actual output file stream that will be written
+		std::ofstream output_file;
+
+		// If we are recording results from a sequence each row refers to a frame, if we are recording an image each row is a face
+		bool is_sequence;
+
+		// Keep track of what we are recording
+		bool output_2D_landmarks;
+		bool output_3D_landmarks;
+		bool output_model_params;
+		bool output_pose;
+		bool output_AUs;
+		bool output_gaze;
+
+		std::vector<std::string> au_names_class;
+		std::vector<std::string> au_names_reg;
+
+	};
+}
+#endif

lib/local/Utilities/include/RecorderHOG.h

@@ -0,0 +1,88 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __RECORDER_HOG_h_
+#define __RECORDER_HOG_h_
+
+// System includes
+#include <vector>
+
+// OpenCV includes
+#include <opencv2/core/core.hpp>
+
+#include <iostream>
+#include <fstream>
+
+namespace Utilities
+{
+
+	//===========================================================================
+	/**
+	A class for recording CSV file from OpenFace
+	*/
+	class RecorderHOG {
+
+	public:
+
+		// The constructor for the recorder, by default does not do anything
+		RecorderHOG();
+		
+		// Adding observations to the recorder
+		void SetObservationHOG(bool success, const cv::Mat_<double>& hog_descriptor, int num_cols, int num_rows, int num_channels);
+
+		void Write();
+
+		bool Open(std::string filename);
+
+		void Close();
+
+	private:
+
+		// Blocking copy and move, as it doesn't make sense to read to write to the same file
+		RecorderHOG & operator= (const RecorderHOG& other);
+		RecorderHOG & operator= (const RecorderHOG&& other);
+		RecorderHOG(const RecorderHOG&& other);
+		RecorderHOG(const RecorderHOG& other);
+
+		std::ofstream hog_file;
+
+		// Internals for recording
+		int num_cols;
+		int num_rows;
+		int num_channels;
+		cv::Mat_<double> hog_descriptor;
+		bool good_frame;
+
+	};
+}
+#endif

lib/local/Utilities/include/RecorderOpenFace.h

@@ -0,0 +1,160 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __RECORDER_OPENFACE_h_
+#define __RECORDER_OPENFACE_h_
+
+#include "RecorderCSV.h"
+#include "RecorderHOG.h"
+#include "RecorderOpenFaceParameters.h"
+
+// System includes
+#include <vector>
+
+// OpenCV includes
+#include <opencv2/core/core.hpp>
+#include <opencv2/highgui/highgui.hpp>
+
+namespace Utilities
+{
+
+	//===========================================================================
+	/**
+	A class for recording data processed by OpenFace (facial landmarks, head pose, facial action units, aligned face, HOG features, and tracked video
+	*/
+	class RecorderOpenFace {
+
+	public:
+
+		// The constructor for the recorder, need to specify if we are recording a sequence or not, in_filename should be just the name and not contain extensions
+		RecorderOpenFace(const std::string in_filename, RecorderOpenFaceParameters parameters, std::vector<std::string>& arguments);
+
+		~RecorderOpenFace();
+
+		// Closing and cleaning up the recorder
+		void Close();
+
+		// Adding observations to the recorder
+
+		// Required observations for video/image-sequence
+		void SetObservationTimestamp(double timestamp);
+
+		// All observations relevant to facial landmarks
+		void SetObservationLandmarks(const cv::Mat_<double>& landmarks_2D, const cv::Mat_<double>& landmarks_3D, 
+			const cv::Vec6d& params_global, const cv::Mat_<double>& params_local, double confidence, bool success);
+
+		// Pose related observations
+		void SetObservationPose(const cv::Vec6d& pose);
+
+		// AU related observations
+		void SetObservationActionUnits(const std::vector<std::pair<std::string, double> >& au_intensities, 
+			const std::vector<std::pair<std::string, double> >& au_occurences);
+
+		// Gaze related observations
+		void SetObservationGaze(const cv::Point3f& gazeDirection0, const cv::Point3f& gazeDirection1,
+			const cv::Vec2d& gaze_angle, const std::vector<cv::Point2d>& eye_landmarks2D, const std::vector<cv::Point3d>& eye_landmarks3D);
+
+		// Face alignment related observations
+		void SetObservationFaceAlign(const cv::Mat& aligned_face);
+
+		// HOG feature related observations
+		void SetObservationHOG(bool good_frame, const cv::Mat_<double>& hog_descriptor, int num_cols, int num_rows, int num_channels);
+
+		void SetObservationVisualization(const cv::Mat &vis_track);
+
+		void WriteObservation();
+
+		std::string GetCSVFile() { return csv_filename; }
+
+	private:
+
+		// Blocking copy, assignment and move operators, as it does not make sense to save to the same location
+		RecorderOpenFace & operator= (const RecorderOpenFace& other);
+		RecorderOpenFace & operator= (const RecorderOpenFace&& other);
+		RecorderOpenFace(const RecorderOpenFace&& other);
+		RecorderOpenFace(const RecorderOpenFace& other);
+
+		// Keeping track of what to output and how to output it
+		const RecorderOpenFaceParameters params;
+
+		// Keep track of the file and output root location
+		std::string record_root;
+		std::string default_record_directory = "processed"; // By default we are writing in the processed directory in the working directory, if no output parameters provided
+		std::string of_filename;
+		std::string filename;
+		std::string csv_filename;
+		std::string aligned_output_directory;
+		std::ofstream metadata_file;
+
+		// The actual output file stream that will be written
+		RecorderCSV csv_recorder;
+		RecorderHOG hog_recorder;
+
+		// The actual temporary storage for the observations
+		double timestamp;
+
+		// Facial landmark related observations
+		cv::Mat_<double> landmarks_2D;
+		cv::Mat_<double> landmarks_3D;
+		cv::Vec6d pdm_params_global;
+		cv::Mat_<double> pdm_params_local;
+		double landmark_detection_confidence;
+		bool landmark_detection_success;
+
+		// Head pose related observations
+		cv::Vec6d head_pose;
+
+		// Action Unit related observations
+		std::vector<std::pair<std::string, double> > au_intensities;
+		std::vector<std::pair<std::string, double> > au_occurences;
+
+		// Gaze related observations
+		cv::Point3f gaze_direction0;
+		cv::Point3f gaze_direction1;
+		cv::Vec2d gaze_angle;
+		std::vector<cv::Point2d> eye_landmarks2D;
+		std::vector<cv::Point3d> eye_landmarks3D;
+
+		int observation_count;
+
+		// For video writing
+		cv::VideoWriter video_writer;
+		std::string media_filename;
+		cv::Mat vis_to_out;
+
+		// For aligned face writing
+		cv::Mat aligned_face;
+
+	};
+}
+#endif

lib/local/Utilities/include/RecorderOpenFaceParameters.h

@@ -0,0 +1,106 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+//  Parameters of the Face analyser
+#ifndef __RECORDER_OPENFACE_PARAM_H
+#define __RECORDER_OPENFACE_PARAM_H
+
+#include <vector>
+#include <opencv2/core/core.hpp>
+
+// Boost includes
+#include <filesystem.hpp>
+#include <filesystem/fstream.hpp>
+
+using namespace std;
+
+namespace Utilities
+{
+
+	class RecorderOpenFaceParameters
+	{
+
+	public:
+
+		// Constructors
+		RecorderOpenFaceParameters(std::vector<std::string> &arguments, bool sequence, bool is_from_webcam, float fx = -1, float fy = -1, float cx = -1, float cy = -1, double fps_vid_out = 30);
+
+		bool isSequence() const { return is_sequence; }
+		bool isFromWebcam() const { return is_from_webcam; }
+		bool output2DLandmarks() const { return output_2D_landmarks; }
+		bool output3DLandmarks() const { return output_3D_landmarks; }
+		bool outputPDMParams() const { return output_model_params; }
+		bool outputPose() const { return output_pose; }
+		bool outputAUs() const { return output_AUs; }
+		bool outputGaze() const { return output_gaze; }
+		bool outputHOG() const { return output_hog; }
+		bool outputTracked() const { return output_tracked; }
+		bool outputAlignedFaces() const { return output_aligned_faces; }
+		std::string outputCodec() const { return output_codec; }
+		double outputFps() const { return fps_vid_out; }
+
+		float getFx() const { return fx; }
+		float getFy() const { return fy; }
+		float getCx() const { return cx; }
+		float getCy() const { return cy; }
+
+	private:
+		
+		// If we are recording results from a sequence each row refers to a frame, if we are recording an image each row is a face
+		bool is_sequence;
+		// If the data is coming from a webcam
+		bool is_from_webcam;
+
+		// Keep track of what we are recording
+		bool output_2D_landmarks;
+		bool output_3D_landmarks;
+		bool output_model_params;
+		bool output_pose;
+		bool output_AUs;
+		bool output_gaze;
+		bool output_hog;
+		bool output_tracked;
+		bool output_aligned_faces;
+		
+		// Some video recording parameters
+		std::string output_codec;
+		double fps_vid_out;
+
+		// Camera parameters for recording in the meta file;
+		float fx, fy, cx, cy;
+
+	};
+
+}
+
+#endif // ____RECORDER_OPENFACE_PARAM_H

lib/local/Utilities/include/RotationHelpers.h

@@ -0,0 +1,160 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __ROTATION_HELPERS_h_
+#define __ROTATION_HELPERS_h_
+
+#include <opencv2/core/core.hpp>
+#include <opencv2/calib3d.hpp>
+
+namespace Utilities
+{
+	//===========================================================================
+	// Angle representation conversion helpers
+	//===========================================================================
+
+	// Using the XYZ convention R = Rx * Ry * Rz, left-handed positive sign
+	static cv::Matx33d Euler2RotationMatrix(const cv::Vec3d& eulerAngles)
+	{
+		cv::Matx33d rotation_matrix;
+
+		double s1 = sin(eulerAngles[0]);
+		double s2 = sin(eulerAngles[1]);
+		double s3 = sin(eulerAngles[2]);
+
+		double c1 = cos(eulerAngles[0]);
+		double c2 = cos(eulerAngles[1]);
+		double c3 = cos(eulerAngles[2]);
+
+		rotation_matrix(0, 0) = c2 * c3;
+		rotation_matrix(0, 1) = -c2 *s3;
+		rotation_matrix(0, 2) = s2;
+		rotation_matrix(1, 0) = c1 * s3 + c3 * s1 * s2;
+		rotation_matrix(1, 1) = c1 * c3 - s1 * s2 * s3;
+		rotation_matrix(1, 2) = -c2 * s1;
+		rotation_matrix(2, 0) = s1 * s3 - c1 * c3 * s2;
+		rotation_matrix(2, 1) = c3 * s1 + c1 * s2 * s3;
+		rotation_matrix(2, 2) = c1 * c2;
+
+		return rotation_matrix;
+	}
+
+	// Using the XYZ convention R = Rx * Ry * Rz, left-handed positive sign
+	static cv::Vec3d RotationMatrix2Euler(const cv::Matx33d& rotation_matrix)
+	{
+		double q0 = sqrt(1 + rotation_matrix(0, 0) + rotation_matrix(1, 1) + rotation_matrix(2, 2)) / 2.0;
+		double q1 = (rotation_matrix(2, 1) - rotation_matrix(1, 2)) / (4.0*q0);
+		double q2 = (rotation_matrix(0, 2) - rotation_matrix(2, 0)) / (4.0*q0);
+		double q3 = (rotation_matrix(1, 0) - rotation_matrix(0, 1)) / (4.0*q0);
+
+		double t1 = 2.0 * (q0*q2 + q1*q3);
+
+		double yaw = asin(2.0 * (q0*q2 + q1*q3));
+		double pitch = atan2(2.0 * (q0*q1 - q2*q3), q0*q0 - q1*q1 - q2*q2 + q3*q3);
+		double roll = atan2(2.0 * (q0*q3 - q1*q2), q0*q0 + q1*q1 - q2*q2 - q3*q3);
+
+		return cv::Vec3d(pitch, yaw, roll);
+	}
+
+	static cv::Vec3d Euler2AxisAngle(const cv::Vec3d& euler)
+	{
+		cv::Matx33d rotMatrix = Euler2RotationMatrix(euler);
+		cv::Vec3d axis_angle;
+		cv::Rodrigues(rotMatrix, axis_angle);
+		return axis_angle;
+	}
+
+	static cv::Vec3d AxisAngle2Euler(const cv::Vec3d& axis_angle)
+	{
+		cv::Matx33d rotation_matrix;
+		cv::Rodrigues(axis_angle, rotation_matrix);
+		return RotationMatrix2Euler(rotation_matrix);
+	}
+
+	static cv::Matx33d AxisAngle2RotationMatrix(const cv::Vec3d& axis_angle)
+	{
+		cv::Matx33d rotation_matrix;
+		cv::Rodrigues(axis_angle, rotation_matrix);
+		return rotation_matrix;
+	}
+
+	static cv::Vec3d RotationMatrix2AxisAngle(const cv::Matx33d& rotation_matrix)
+	{
+		cv::Vec3d axis_angle;
+		cv::Rodrigues(rotation_matrix, axis_angle);
+		return axis_angle;
+	}
+
+	// Generally useful 3D functions
+	static void Project(cv::Mat_<double>& dest, const cv::Mat_<double>& mesh, double fx, double fy, double cx, double cy)
+	{
+		dest = cv::Mat_<double>(mesh.rows, 2, 0.0);
+
+		int num_points = mesh.rows;
+
+		double X, Y, Z;
+
+		cv::Mat_<double>::const_iterator mData = mesh.begin();
+		cv::Mat_<double>::iterator projected = dest.begin();
+
+		for (int i = 0; i < num_points; i++)
+		{
+			// Get the points
+			X = *(mData++);
+			Y = *(mData++);
+			Z = *(mData++);
+
+			double x;
+			double y;
+
+			// if depth is 0 the projection is different
+			if (Z != 0)
+			{
+				x = ((X * fx / Z) + cx);
+				y = ((Y * fy / Z) + cy);
+			}
+			else
+			{
+				x = X;
+				y = Y;
+			}
+
+			// Project and store in dest matrix
+			(*projected++) = x;
+			(*projected++) = y;
+		}
+
+	}
+
+}
+#endif

lib/local/Utilities/include/SequenceCapture.h

@@ -0,0 +1,140 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __SEQUENCE_CAPTURE_h_
+#define __SEQUENCE_CAPTURE_h_
+
+// System includes
+#include <fstream>
+#include <sstream>
+#include <vector>
+
+// OpenCV includes
+#include <opencv2/core/core.hpp>
+#include <opencv2/highgui/highgui.hpp>
+
+namespace Utilities
+{
+
+	//===========================================================================
+	/**
+	A class for capturing sequences from video, webcam, and image directories
+	*/
+	class SequenceCapture {
+
+	public:
+
+		// Default constructor
+		SequenceCapture() {};
+
+		// Destructor
+		~SequenceCapture();
+
+		// Opening based on command line arguments
+		bool Open(std::vector<std::string>& arguments);
+
+		// Direct opening
+
+		// Webcam
+		bool OpenWebcam(int device_id, int image_width = 640, int image_height = 480, float fx = -1, float fy = -1, float cx = -1, float cy = -1);
+
+		// Image sequence in the directory
+		bool OpenImageSequence(std::string directory, float fx = -1, float fy = -1, float cx = -1, float cy = -1);
+
+		// Video file
+		bool OpenVideoFile(std::string video_file, float fx = -1, float fy = -1, float cx = -1, float cy = -1);
+
+		bool IsWebcam() { return is_webcam; }
+
+		// Getting the next frame
+		cv::Mat GetNextFrame();
+
+		// Getting the most recent grayscale frame (need to call GetNextFrame first)
+		cv::Mat_<uchar> GetGrayFrame();
+
+		// Parameters describing the sequence and it's progress
+		double GetProgress();
+
+		bool IsOpened();
+
+		int frame_width;
+		int frame_height;
+
+		float fx, fy, cx, cy;
+
+		double fps;
+
+		double time_stamp;
+
+		// Name of the video file, image directory, or the webcam
+		std::string name;
+
+		// Allows to differentiate if failed because no input specified or if failed to open a specified input
+		bool no_input_specified;
+
+
+	private:
+
+		// Blocking copy and move, as it doesn't make sense to have several readers pointed at the same source, and this would cause issues, especially with webcams
+		SequenceCapture & operator= (const SequenceCapture& other);
+		SequenceCapture & operator= (const SequenceCapture&& other);
+		SequenceCapture(const SequenceCapture&& other);
+		SequenceCapture(const SequenceCapture& other);
+
+		// Used for capturing webcam and video
+		cv::VideoCapture capture;
+
+		// Storing the latest captures
+		cv::Mat latest_frame;
+		cv::Mat_<uchar> latest_gray_frame;
+		
+		// Keeping track of frame number and the files in the image sequence
+		size_t  frame_num;
+		std::vector<std::string> image_files;
+
+		// Length of video allowing to assess progress
+		size_t vid_length;
+
+		// If using a webcam, helps to keep track of time
+		int64 start_time;
+
+		// Keeping track if we are opening a video, webcam or image sequence
+		bool is_webcam;
+		bool is_image_seq;
+
+		void SetCameraIntrinsics(float fx, float fy, float cx, float cy);
+
+
+	};
+}
+#endif

lib/local/Utilities/include/VisualizationUtils.h

@@ -0,0 +1,76 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __VISUALIZATION_UTILS_h_
+#define __VISUALIZATION_UTILS_h_
+
+#include <opencv2/core/core.hpp>
+
+#include <vector>
+#include <queue>
+
+namespace Utilities
+{
+
+	// TODO draw AU results
+
+	// Drawing a bounding box around the face in an image
+	void DrawBox(cv::Mat image, cv::Vec6d pose, cv::Scalar color, int thickness, float fx, float fy, float cx, float cy);
+	void DrawBox(const std::vector<std::pair<cv::Point2d, cv::Point2d>>& lines, cv::Mat image, cv::Scalar color, int thickness);
+
+	// Computing a bounding box to be drawn
+	std::vector<std::pair<cv::Point2d, cv::Point2d>> CalculateBox(cv::Vec6d pose, float fx, float fy, float cx, float cy);
+
+	void Visualise_FHOG(const cv::Mat_<double>& descriptor, int num_rows, int num_cols, cv::Mat& visualisation);
+
+	class FpsTracker
+	{
+	public:
+		
+		double history_length;
+
+		void AddFrame();
+
+		double GetFPS();
+
+		FpsTracker();
+
+	private:
+		std::queue<double> frame_times;
+
+		void DiscardOldFrames();
+
+	};
+
+}
+#endif

lib/local/Utilities/include/Visualizer.h

@@ -0,0 +1,107 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#ifndef __VISUALIZER_h_
+#define __VISUALIZER_h_
+
+// System includes
+#include <vector>
+
+// OpenCV includes
+#include <opencv2/core/core.hpp>
+#include <opencv2/highgui/highgui.hpp>
+
+namespace Utilities
+{
+
+	//===========================================================================
+	/**
+	A class for recording data processed by OpenFace (facial landmarks, head pose, facial action units, aligned face, HOG features, and tracked video
+	*/
+	class Visualizer {
+
+	public:
+
+		// The constructor for the visualizer that specifies what to visualize
+		Visualizer(std::vector<std::string> arguments);
+		Visualizer(bool vis_track, bool vis_hog, bool vis_align);
+		
+		// Adding observations to the visualizer
+		
+		// Pose related observations
+		void SetImage(const cv::Mat& canvas, float fx, float fy, float cx, float cy);
+
+		// All observations relevant to facial landmarks (optional visibilities parameter to not display all landmarks)
+		void SetObservationLandmarks(const cv::Mat_<double>& landmarks_2D, double confidence, bool success, const cv::Mat_<int>& visibilities = cv::Mat_<int>());
+
+		// Pose related observations
+		void SetObservationPose(const cv::Vec6d& pose, double confidence);
+		
+		// Gaze related observations
+		void SetObservationGaze(const cv::Point3f& gazeDirection0, const cv::Point3f& gazeDirection1, const std::vector<cv::Point2d>& eye_landmarks, const std::vector<cv::Point3d>& eye_landmarks3d, double confidence);
+
+		// Face alignment related observations
+		void SetObservationFaceAlign(const cv::Mat& aligned_face);
+
+		// HOG feature related observations
+		void SetObservationHOG(const cv::Mat_<double>& hog_descriptor, int num_cols, int num_rows);
+
+		void SetFps(double fps);
+
+		// Return key-press that could have resulted in the open windows
+		char ShowObservation();
+
+		cv::Mat GetVisImage();
+
+		// Keeping track of what we're visualizing
+		bool vis_track;
+		bool vis_hog;
+		bool vis_align;
+		
+		// Can be adjusted to show less confident frames
+		double visualisation_boundary = 0.4;
+
+	private:
+
+		// Temporary variables for visualization
+		cv::Mat captured_image; // out canvas
+		cv::Mat tracked_image;
+		cv::Mat hog_image;
+		cv::Mat aligned_face_image;
+
+		// Useful for drawing 3d
+		float fx, fy, cx, cy;
+
+	};
+}
+#endif

lib/local/Utilities/src/ImageCapture.cpp

@@ -0,0 +1,421 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#include "ImageCapture.h"
+#include "ImageManipulationHelpers.h"
+#include <iostream>
+
+// Boost includes
+#include <filesystem.hpp>
+#include <filesystem/fstream.hpp>
+#include <boost/algorithm/string.hpp>
+
+// OpenCV includes
+#include <opencv2/imgproc.hpp>
+
+using namespace Utilities;
+
+#define INFO_STREAM( stream ) \
+std::cout << stream << std::endl
+
+#define WARN_STREAM( stream ) \
+std::cout << "Warning: " << stream << std::endl
+
+#define ERROR_STREAM( stream ) \
+std::cout << "Error: " << stream << std::endl
+
+bool ImageCapture::Open(std::vector<std::string>& arguments)
+{
+
+	// Consuming the input arguments
+	bool* valid = new bool[arguments.size()];
+
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		valid[i] = true;
+	}
+
+	// Some default values
+	std::string input_root = "";
+	fx = -1; fy = -1; cx = -1; cy = -1;
+	frame_num = 0;
+
+	std::string separator = std::string(1, boost::filesystem::path::preferred_separator);
+
+	// First check if there is a root argument (so that videos and input directories could be defined more easily)
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		if (arguments[i].compare("-root") == 0)
+		{
+			input_root = arguments[i + 1] + separator;
+			i++;
+		}
+		if (arguments[i].compare("-inroot") == 0)
+		{
+			input_root = arguments[i + 1] + separator;
+			i++;
+		}
+	}
+
+	std::string input_directory;
+	std::string bbox_directory;
+
+	bool directory_found = false;
+	has_bounding_boxes = false;
+
+	std::vector<std::string> input_image_files;
+
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		if (arguments[i].compare("-f") == 0)
+		{
+			input_image_files.push_back(input_root + arguments[i + 1]);
+			valid[i] = false;
+			valid[i + 1] = false;
+			i++;
+		}
+		else if (arguments[i].compare("-fdir") == 0)
+		{
+			if (directory_found)
+			{
+				WARN_STREAM("Input directory already found, using the first one:" + input_directory);
+			}
+			else 
+			{
+				input_directory = (input_root + arguments[i + 1]);
+				valid[i] = false;
+				valid[i + 1] = false;
+				i++;
+				directory_found = true;
+			}
+		}
+		else if (arguments[i].compare("-bboxdir") == 0)
+		{
+			bbox_directory = (input_root + arguments[i + 1]);
+			valid[i] = false;
+			valid[i + 1] = false;
+			has_bounding_boxes = true;
+			i++;
+		}
+		else if (arguments[i].compare("-fx") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> fx;
+			i++;
+		}
+		else if (arguments[i].compare("-fy") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> fy;
+			i++;
+		}
+		else if (arguments[i].compare("-cx") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> cx;
+			i++;
+		}
+		else if (arguments[i].compare("-cy") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> cy;
+			i++;
+		}
+	}
+
+	for (int i = (int)arguments.size() - 1; i >= 0; --i)
+	{
+		if (!valid[i])
+		{
+			arguments.erase(arguments.begin() + i);
+		}
+	}
+
+	// Based on what was read in open the sequence
+	if (!input_image_files.empty())
+	{
+		return OpenImageFiles(input_image_files, fx, fy, cx, cy);
+	}
+	if (!input_directory.empty())
+	{
+		return OpenDirectory(input_directory, bbox_directory, fx, fy, cx, cy);
+	}
+
+	// If no input found return false and set a flag for it
+	no_input_specified = true;
+
+	return false;
+}
+
+bool ImageCapture::OpenImageFiles(const std::vector<std::string>& image_files, float fx, float fy, float cx, float cy)
+{
+
+	no_input_specified = false;
+
+	latest_frame = cv::Mat();
+	latest_gray_frame = cv::Mat();
+	this->image_files = image_files;
+
+	// Allow for setting the camera intrinsics, but have to be the same ones for every image
+	if (fx != -1 && fy != -1 )
+	{
+		image_focal_length_set = true;
+		this->fx = fx;
+		this->fy = fy;
+
+	}
+	else
+	{
+		image_focal_length_set = false;
+	}
+
+	if (cx != -1 && cy != -1)
+	{
+		this->cx = cx;
+		this->cy = cy;
+		image_optical_center_set = true;
+	}
+	else
+	{
+		image_optical_center_set = false;
+	}
+
+	return true;
+
+}
+
+bool ImageCapture::OpenDirectory(std::string directory, std::string bbox_directory, float fx, float fy, float cx, float cy)
+{
+	INFO_STREAM("Attempting to read from directory: " << directory);
+
+	no_input_specified = false;
+
+	image_files.clear();
+
+	boost::filesystem::path image_directory(directory);
+	std::vector<boost::filesystem::path> file_in_directory;
+	copy(boost::filesystem::directory_iterator(image_directory), boost::filesystem::directory_iterator(), back_inserter(file_in_directory));
+
+	// Sort the images in the directory first
+	sort(file_in_directory.begin(), file_in_directory.end());
+
+	std::vector<std::string> curr_dir_files;
+
+	for (std::vector<boost::filesystem::path>::const_iterator file_iterator(file_in_directory.begin()); file_iterator != file_in_directory.end(); ++file_iterator)
+	{
+		// Possible image extension .jpg and .png
+		if (file_iterator->extension().string().compare(".jpg") == 0 || file_iterator->extension().string().compare(".jpeg") == 0 || file_iterator->extension().string().compare(".png") == 0 || file_iterator->extension().string().compare(".bmp") == 0)
+		{
+			curr_dir_files.push_back(file_iterator->string());
+
+			// If bounding box directory is specified, read the bounding boxes from it
+			if (!bbox_directory.empty())
+			{
+				boost::filesystem::path current_file = *file_iterator;
+				boost::filesystem::path bbox_file = current_file.replace_extension("txt");
+
+				// If there is a bounding box file push it to the list of bounding boxes
+				if (boost::filesystem::exists(bbox_file))
+				{
+					std::ifstream in_bbox(bbox_file.string().c_str(), std::ios_base::in);
+
+					std::vector<cv::Rect_<double> > bboxes_image;
+
+					// Keep reading bounding boxes from a file, stop if empty line or 
+					while (!in_bbox.eof())
+					{
+						std::string bbox_string;
+						std::getline(in_bbox, bbox_string);
+
+						if (bbox_string.empty())
+							continue;
+
+						std::stringstream ss(bbox_string);
+
+						double min_x, min_y, max_x, max_y;
+
+						ss >> min_x >> min_y >> max_x >> max_y;
+						bboxes_image.push_back(cv::Rect_<double>(min_x, min_y, max_x - min_x, max_y - min_y));
+					}
+					in_bbox.close();
+
+					bounding_boxes.push_back(bboxes_image);
+				}
+				else
+				{
+					ERROR_STREAM("Could not find the corresponding bounding box for file:" + file_iterator->string());
+					exit(1);
+				}
+			}
+		}
+	}
+
+	image_files = curr_dir_files;
+
+	if (image_files.empty())
+	{
+		std::cout << "No images found in the directory: " << directory << std::endl;
+		return false;
+	}
+
+	// Allow for setting the camera intrinsics, but have to be the same ones for every image
+	if (fx != -1 && fy != -1)
+	{
+		image_focal_length_set = true;
+		this->fx = fx;
+		this->fy = fy;
+
+	}
+	else
+	{
+		image_focal_length_set = false;
+	}
+
+	if (cx != -1 && cy != -1)
+	{
+		this->cx = cx;
+		this->cy = cy;
+		image_optical_center_set = true;
+	}
+	else
+	{
+		image_optical_center_set = false;
+	}
+
+	return true;
+
+}
+
+void ImageCapture::SetCameraIntrinsics(float fx, float fy, float cx, float cy)
+{
+	// If optical centers are not defined just use center of image
+	if (cx == -1)
+	{
+		this->cx = this->image_width / 2.0f;
+		this->cy = this->image_height / 2.0f;
+	}
+	else
+	{
+		this->cx = cx;
+		this->cy = cy;
+	}
+	// Use a rough guess-timate of focal length
+	if (fx == -1)
+	{
+		this->fx = 500.0f * (this->image_width / 640.0f);
+		this->fy = 500.0f * (this->image_height / 480.0f);
+
+		this->fx = (this->fx + this->fy) / 2.0f;
+		this->fy = this->fx;
+	}
+	else
+	{
+		this->fx = fx;
+		this->fy = fy;
+	}
+}
+
+// Returns a read image in 3 channel RGB format, also prepares a grayscale frame if needed
+cv::Mat ImageCapture::GetNextImage()
+{
+	if (image_files.empty() || frame_num >= image_files.size())
+	{
+		// Indicate lack of success by returning an empty image
+		latest_frame = cv::Mat();
+		return latest_frame;
+	}
+		
+	// Load the image as an 8 bit RGB
+	latest_frame = cv::imread(image_files[frame_num], CV_LOAD_IMAGE_COLOR);
+
+	if (latest_frame.empty())
+	{
+		ERROR_STREAM("Could not open the image: " + image_files[frame_num]);
+		exit(1);
+	}
+
+	image_height = latest_frame.size().height;
+	image_width = latest_frame.size().width;
+
+	// Reset the intrinsics for every image if they are not set globally
+	float _fx = -1;
+	float _fy = -1;
+	
+	if (image_focal_length_set)
+	{
+		_fx = fx;
+		_fy = fy;
+	}
+	
+	float _cx = -1;
+	float _cy = -1;
+
+	if (image_optical_center_set)
+	{
+		_cx = cx;
+		_cy = cy;
+	}
+
+	SetCameraIntrinsics(_fx, _fy, _cx, _cy);
+
+	// Set the grayscale frame
+	ConvertToGrayscale_8bit(latest_frame, latest_gray_frame);
+
+	this->name = image_files[frame_num];
+
+	frame_num++;
+
+	return latest_frame;
+}
+
+std::vector<cv::Rect_<double> > ImageCapture::GetBoundingBoxes()
+{
+	if (!bounding_boxes.empty())
+	{
+		return bounding_boxes[frame_num - 1];
+	}
+	else
+	{
+		return std::vector<cv::Rect_<double> >();
+	}
+}
+
+double ImageCapture::GetProgress()
+{
+	return (double)frame_num / (double)image_files.size();
+}
+
+cv::Mat_<uchar> ImageCapture::GetGrayFrame()
+{
+	return latest_gray_frame;
+}

lib/local/Utilities/src/RecorderCSV.cpp

@@ -0,0 +1,347 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#include "RecorderCSV.h"
+
+// For sorting
+#include <algorithm>
+
+// For standard out
+#include <iostream>
+#include <iomanip>
+#include <locale>
+
+using namespace Utilities;
+
+// Default constructor initializes the variables
+RecorderCSV::RecorderCSV():output_file(){};
+
+// Making sure full stop is used for decimal point separation
+struct fullstop : std::numpunct<char> {
+	char do_decimal_point() const { return '.'; }
+};
+
+// Opening the file and preparing the header for it
+bool RecorderCSV::Open(std::string output_file_name, bool is_sequence, bool output_2D_landmarks, bool output_3D_landmarks, bool output_model_params, bool output_pose, bool output_AUs, bool output_gaze,
+	int num_face_landmarks, int num_model_modes, int num_eye_landmarks, const std::vector<std::string>& au_names_class, const std::vector<std::string>& au_names_reg)
+{
+
+	output_file.open(output_file_name, std::ios_base::out);
+	output_file.imbue(std::locale(output_file.getloc(), new fullstop));
+
+	if (!output_file.is_open())
+		return false;
+
+	this->is_sequence = is_sequence;
+
+	// Set up what we are recording
+	this->output_2D_landmarks = output_2D_landmarks;
+	this->output_3D_landmarks = output_3D_landmarks;
+	this->output_AUs = output_AUs;
+	this->output_gaze = output_gaze;
+	this->output_model_params = output_model_params;
+	this->output_pose = output_pose;
+
+	this->au_names_class = au_names_class;
+	this->au_names_reg = au_names_reg;
+
+	// Different headers if we are writing out the results on a sequence or an individual image
+	if(this->is_sequence)
+	{
+		output_file << "frame, timestamp, confidence, success";
+	}
+	else
+	{
+		output_file << "face, confidence";
+	}
+
+	if (output_gaze)
+	{
+		output_file << ", gaze_0_x, gaze_0_y, gaze_0_z, gaze_1_x, gaze_1_y, gaze_1_z, gaze_angle_x, gaze_angle_y";
+
+		for (int i = 0; i < num_eye_landmarks; ++i)
+		{
+			output_file << ", eye_lmk_x_" << i;
+		}
+		for (int i = 0; i < num_eye_landmarks; ++i)
+		{
+			output_file << ", eye_lmk_y_" << i;
+		}
+
+		for (int i = 0; i < num_eye_landmarks; ++i)
+		{
+			output_file << ", eye_lmk_X_" << i;
+		}
+		for (int i = 0; i < num_eye_landmarks; ++i)
+		{
+			output_file << ", eye_lmk_Y_" << i;
+		}
+		for (int i = 0; i < num_eye_landmarks; ++i)
+		{
+			output_file << ", eye_lmk_Z_" << i;
+		}
+	}
+
+	if (output_pose)
+	{
+		output_file << ", pose_Tx, pose_Ty, pose_Tz, pose_Rx, pose_Ry, pose_Rz";
+	}
+
+	if (output_2D_landmarks)
+	{
+		for (int i = 0; i < num_face_landmarks; ++i)
+		{
+			output_file << ", x_" << i;
+		}
+		for (int i = 0; i < num_face_landmarks; ++i)
+		{
+			output_file << ", y_" << i;
+		}
+	}
+
+	if (output_3D_landmarks)
+	{
+		for (int i = 0; i < num_face_landmarks; ++i)
+		{
+			output_file << ", X_" << i;
+		}
+		for (int i = 0; i < num_face_landmarks; ++i)
+		{
+			output_file << ", Y_" << i;
+		}
+		for (int i = 0; i < num_face_landmarks; ++i)
+		{
+			output_file << ", Z_" << i;
+		}
+	}
+
+	// Outputting model parameters (rigid and non-rigid), the first parameters are the 6 rigid shape parameters, they are followed by the non rigid shape parameters
+	if (output_model_params)
+	{
+		output_file << ", p_scale, p_rx, p_ry, p_rz, p_tx, p_ty";
+		for (int i = 0; i < num_model_modes; ++i)
+		{
+			output_file << ", p_" << i;
+		}
+	}
+
+	if (output_AUs)
+	{
+		std::sort(this->au_names_reg.begin(), this->au_names_reg.end());
+		for (std::string reg_name : this->au_names_reg)
+		{
+			output_file << ", " << reg_name << "_r";
+		}
+
+		std::sort(this->au_names_class.begin(), this->au_names_class.end());
+		for (std::string class_name : this->au_names_class)
+		{
+			output_file << ", " << class_name << "_c";
+		}
+	}
+
+	output_file << std::endl;
+
+	return true;
+
+}
+
+void RecorderCSV::WriteLine(int observation_count, double time_stamp, bool landmark_detection_success, double landmark_confidence,
+	const cv::Mat_<double>& landmarks_2D, const cv::Mat_<double>& landmarks_3D, const cv::Mat_<double>& pdm_model_params, const cv::Vec6d& rigid_shape_params, cv::Vec6d& pose_estimate,
+	const cv::Point3f& gazeDirection0, const cv::Point3f& gazeDirection1, const cv::Vec2d& gaze_angle, const std::vector<cv::Point2d>& eye_landmarks2d, const std::vector<cv::Point3d>& eye_landmarks3d,
+	const std::vector<std::pair<std::string, double> >& au_intensities, const std::vector<std::pair<std::string, double> >& au_occurences)
+{
+
+	if (!output_file.is_open())
+	{
+		std::cout << "The output CSV file is not open, exiting" << std::endl;
+		exit(1);
+	}
+
+	// Making sure fixed and not scientific notation is used
+	output_file << std::fixed;
+	output_file << std::noshowpoint;
+	if(is_sequence)
+	{
+		output_file << std::setprecision(3);
+		output_file << observation_count << ", " << time_stamp;
+		output_file << std::setprecision(2);
+		output_file << ", " << landmark_confidence;
+		output_file << std::setprecision(0);
+		output_file << ", " << landmark_detection_success;
+	}
+	else
+	{
+		output_file << std::setprecision(3);
+		output_file << observation_count << ", " << landmark_confidence;
+	}
+	// Output the estimated gaze
+	if (output_gaze)
+	{
+		output_file << std::setprecision(6);
+		output_file << ", " << gazeDirection0.x << ", " << gazeDirection0.y << ", " << gazeDirection0.z
+			<< ", " << gazeDirection1.x << ", " << gazeDirection1.y << ", " << gazeDirection1.z;
+
+		// Output gaze angle (same format as head pose angle)
+		output_file << std::setprecision(3);
+		output_file << ", " << gaze_angle[0] << ", " << gaze_angle[1];
+
+		// Output the 2D eye landmarks
+		output_file << std::setprecision(1);
+		for (auto eye_lmk : eye_landmarks2d)
+		{
+			output_file << ", " << eye_lmk.x;
+		}
+
+		for (auto eye_lmk : eye_landmarks2d)
+		{
+			output_file << ", " << eye_lmk.y;
+		}
+
+		// Output the 3D eye landmarks
+		for (auto eye_lmk : eye_landmarks3d)
+		{
+			output_file << ", " << eye_lmk.x;
+		}
+
+		for (auto eye_lmk : eye_landmarks3d)
+		{
+			output_file << ", " << eye_lmk.y;
+		}
+
+		for (auto eye_lmk : eye_landmarks3d)
+		{
+			output_file << ", " << eye_lmk.z;
+		}
+	}
+
+	// Output the estimated head pose
+	if (output_pose)
+	{
+		output_file << std::setprecision(1);
+		output_file << ", " << pose_estimate[0] << ", " << pose_estimate[1] << ", " << pose_estimate[2];
+		output_file << std::setprecision(3);
+		output_file << ", " << pose_estimate[3] << ", " << pose_estimate[4] << ", " << pose_estimate[5];
+	}
+
+	// Output the detected 2D facial landmarks
+	if (output_2D_landmarks)
+	{
+		output_file.precision(1);
+		// Output the 2D eye landmarks
+		for (auto lmk : landmarks_2D)
+		{
+			output_file << ", " << lmk;
+		}
+	}
+
+	// Output the detected 3D facial landmarks
+	if (output_3D_landmarks)
+	{
+		output_file.precision(1);
+		// Output the 2D eye landmarks
+		for (auto lmk : landmarks_3D)
+		{
+			output_file << ", " << lmk;
+		}
+	}
+
+	if (output_model_params)
+	{
+		output_file.precision(3);
+		for (int i = 0; i < 6; ++i)
+		{
+			output_file << ", " << rigid_shape_params[i];
+		}
+		// Output the non_rigid shape parameters
+		for (auto lmk : pdm_model_params)
+		{
+			output_file << ", " << lmk;
+		}
+	}
+
+	if (output_AUs)
+	{
+
+		// write out ar the correct index
+		output_file.precision(2);
+		for (std::string au_name : au_names_reg)
+		{
+			for (auto au_reg : au_intensities)
+			{
+				if (au_name.compare(au_reg.first) == 0)
+				{
+					output_file << ", " << au_reg.second;
+					break;
+				}
+			}
+		}
+
+		if (au_intensities.size() == 0)
+		{
+			for (size_t p = 0; p < au_names_reg.size(); ++p)
+			{
+				output_file << ", 0";
+			}
+		}
+
+		output_file.precision(1);
+		// write out ar the correct index
+		for (std::string au_name : au_names_class)
+		{
+			for (auto au_class : au_occurences)
+			{
+				if (au_name.compare(au_class.first) == 0)
+				{
+					output_file << ", " << au_class.second;
+					break;
+				}
+			}
+		}
+
+		if (au_occurences.size() == 0)
+		{
+			for (size_t p = 0; p < au_names_class.size(); ++p)
+			{
+				output_file << ", 0";
+			}
+		}
+	}
+	output_file << std::endl;
+}
+
+// Closing the file and cleaning up
+void RecorderCSV::Close()
+{
+	output_file.close();
+}

lib/local/Utilities/src/RecorderHOG.cpp

@@ -0,0 +1,95 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#include "RecorderHOG.h"
+
+#include <fstream>
+
+using namespace Utilities;
+
+// Default constructor initializes the variables
+RecorderHOG::RecorderHOG() :hog_file() {};
+
+// Opening the file and preparing the header for it
+bool RecorderHOG::Open(std::string output_file_name)
+{
+	hog_file.open(output_file_name, std::ios_base::out | std::ios_base::binary);
+
+	return hog_file.is_open();
+}
+
+void RecorderHOG::Close()
+{
+	hog_file.close();
+}
+
+void RecorderHOG::Write()
+{
+	hog_file.write((char*)(&num_cols), 4);
+	hog_file.write((char*)(&num_rows), 4);
+	hog_file.write((char*)(&num_channels), 4);
+
+	// Not the best way to store a bool, but will be much easier to read it
+	float good_frame_float;
+	if (good_frame)
+		good_frame_float = 1;
+	else
+		good_frame_float = -1;
+
+	hog_file.write((char*)(&good_frame_float), 4);
+
+	cv::MatConstIterator_<double> descriptor_it = hog_descriptor.begin();
+
+	for (int y = 0; y < num_cols; ++y)
+	{
+		for (int x = 0; x < num_rows; ++x)
+		{
+			for (unsigned int o = 0; o < 31; ++o)
+			{
+
+				float hog_data = (float)(*descriptor_it++);
+				hog_file.write((char*)&hog_data, 4);
+			}
+		}
+	}
+}
+
+// Writing to a HOG file
+void RecorderHOG::SetObservationHOG(bool good_frame, const cv::Mat_<double>& hog_descriptor, int num_cols, int num_rows, int num_channels)
+{
+	this->num_cols = num_cols;
+	this->num_rows = num_rows;
+	this->num_channels = num_channels;
+	this->hog_descriptor = hog_descriptor;
+	this->good_frame = good_frame;
+}

lib/local/Utilities/src/RecorderOpenFace.cpp

@@ -0,0 +1,408 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#include "RecorderOpenFace.h"
+
+// For sorting
+#include <algorithm>
+
+// File manipulation
+#include <fstream>
+#include <sstream>
+#include <iostream>
+
+// Boost includes for file system manipulation
+#include <filesystem.hpp>
+#include <filesystem/fstream.hpp>
+#include <boost/algorithm/string.hpp>
+
+using namespace boost::filesystem;
+
+using namespace Utilities;
+
+#define WARN_STREAM( stream ) \
+std::cout << "Warning: " << stream << std::endl
+
+void CreateDirectory(std::string output_path)
+{
+
+	// Creating the right directory structure
+	auto p = path(output_path);
+
+	if (!boost::filesystem::exists(p))
+	{
+		bool success = boost::filesystem::create_directories(p);
+
+		if (!success)
+		{
+			std::cout << "ERROR: failed to create output directory:" << p.string() << ", do you have permission to create directory" << std::endl;
+			exit(1);
+		}
+	}
+}
+
+RecorderOpenFace::RecorderOpenFace(const std::string in_filename, RecorderOpenFaceParameters parameters, std::vector<std::string>& arguments):video_writer(), params(parameters)
+{
+
+	// From the filename, strip out the name without directory and extension
+	if (boost::filesystem::is_directory(in_filename))
+	{
+		filename = boost::filesystem::canonical(boost::filesystem::path(in_filename)).filename().string();
+	}
+	else
+	{
+		filename = boost::filesystem::path(in_filename).filename().replace_extension("").string();
+	}
+
+	// Consuming the input arguments
+	bool* valid = new bool[arguments.size()];
+
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		valid[i] = true;
+	}
+
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		if (arguments[i].compare("-out_dir") == 0)
+		{
+			record_root = arguments[i + 1];
+		}
+	}
+
+	// Determine output directory
+	bool output_found = false;
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		if (!output_found && arguments[i].compare("-of") == 0)
+		{
+			record_root = (boost::filesystem::path(record_root) / boost::filesystem::path(arguments[i + 1])).remove_filename().string();
+			filename = path(boost::filesystem::path(arguments[i + 1])).replace_extension("").filename().string();
+			valid[i] = false;
+			valid[i + 1] = false;
+			i++;
+			output_found = true;
+		}
+	}
+
+	// If recording directory not set, record to default location
+	if (record_root.empty())
+		record_root = default_record_directory;
+
+	for (int i = (int)arguments.size() - 1; i >= 0; --i)
+	{
+		if (!valid[i])
+		{
+			arguments.erase(arguments.begin() + i);
+		}
+	}
+
+	// Construct the directories required for the output
+	CreateDirectory(record_root);
+
+	// Create the filename for the general output file that contains all of the meta information about the recording
+	path of_det_name(filename);
+	of_det_name = path(record_root) / path(filename + "_of_details.txt");
+
+	// Write in the of file what we are outputing what is the input etc.
+	metadata_file.open(of_det_name.string(), std::ios_base::out);
+	if (!metadata_file.is_open())
+	{
+		cout << "ERROR: could not open the output file:" << of_det_name << ", either the path of the output directory is wrong or you do not have the permissions to write to it" << endl;
+		exit(1);
+	}
+
+	// Populate relative and full path names in the meta file, unless it is a webcam
+	if(!params.isFromWebcam())
+	{
+		string input_filename_relative = in_filename;
+		string input_filename_full = in_filename;
+		if (!boost::filesystem::path(input_filename_full).is_absolute())
+		{
+			input_filename_full = boost::filesystem::canonical(input_filename_relative).string();
+		}
+		metadata_file << "Input:" << input_filename_relative << endl;
+		metadata_file << "Input full path:" << input_filename_full << endl;
+	}
+	else
+	{
+		// Populate the metadata file
+		metadata_file << "Input:webcam" << endl;
+	}
+
+	metadata_file << "Camera parameters:" << parameters.getFx() << "," << parameters.getFy() << "," << parameters.getCx() << "," << parameters.getCy() << endl;
+
+	// Create the required individual recorders, CSV, HOG, aligned, video
+	csv_filename = filename + ".csv";
+
+	// Consruct HOG recorder here
+	if(params.outputHOG())
+	{
+		// Output the data based on record_root, but do not include record_root in the meta file, as it is also in that directory
+		std::string hog_filename = filename + ".hog";
+		metadata_file << "Output HOG:" << hog_filename << endl;
+		hog_filename = (path(record_root) / hog_filename).string();
+		hog_recorder.Open(hog_filename);
+	}
+
+	// saving the videos	
+	if (params.outputTracked())
+	{
+		if(parameters.isSequence())
+		{
+			// Output the data based on record_root, but do not include record_root in the meta file, as it is also in that directory
+			this->media_filename = filename + ".avi";
+			metadata_file << "Output video:" << this->media_filename << endl;
+			this->media_filename = (path(record_root) / this->media_filename).string();
+		}
+		else
+		{
+			this->media_filename = filename + ".jpg";
+			metadata_file << "Output image:" << this->media_filename << endl;
+			this->media_filename = (path(record_root) / this->media_filename).string();
+		}
+	}
+
+	// Prepare image recording
+	if (params.outputAlignedFaces())
+	{
+		aligned_output_directory = filename + "_aligned";
+		metadata_file << "Output aligned directory:" << this->aligned_output_directory << endl;
+		this->aligned_output_directory = (path(record_root) / this->aligned_output_directory).string();
+		CreateDirectory(aligned_output_directory);
+	}
+		
+	observation_count = 0;
+
+}
+
+void RecorderOpenFace::SetObservationFaceAlign(const cv::Mat& aligned_face)
+{
+	this->aligned_face = aligned_face;
+}
+
+void RecorderOpenFace::SetObservationVisualization(const cv::Mat &vis_track)
+{
+	if (params.outputTracked())
+	{
+		// Initialize the video writer if it has not been opened yet
+		if(params.isSequence() && !video_writer.isOpened())
+		{
+			std::string output_codec = params.outputCodec();
+			try
+			{
+				video_writer.open(media_filename, CV_FOURCC(output_codec[0], output_codec[1], output_codec[2], output_codec[3]), params.outputFps(), vis_track.size(), true);
+
+				if (!video_writer.isOpened())
+				{
+					WARN_STREAM("Could not open VideoWriter, OUTPUT FILE WILL NOT BE WRITTEN.");
+				}
+			}
+			catch (cv::Exception e)
+			{
+				WARN_STREAM("Could not open VideoWriter, OUTPUT FILE WILL NOT BE WRITTEN. Currently using codec " << output_codec << ", try using an other one (-oc option)");
+			}
+
+		}
+
+		vis_to_out = vis_track;
+
+	}
+
+}
+
+void RecorderOpenFace::WriteObservation()
+{
+	observation_count++;
+
+	// Write out the CSV file (it will always be there, even if not outputting anything more but frame/face numbers)
+	
+	if(observation_count == 1)
+	{
+		// As we are writing out the header, work out some things like number of landmarks, names of AUs etc.
+		int num_face_landmarks = landmarks_2D.rows / 2;
+		int num_eye_landmarks = (int)eye_landmarks2D.size();
+		int num_model_modes = pdm_params_local.rows;
+
+		std::vector<std::string> au_names_class;
+		for (auto au : au_occurences)
+		{
+			au_names_class.push_back(au.first);
+		}
+
+		std::sort(au_names_class.begin(), au_names_class.end());
+
+		std::vector<std::string> au_names_reg;
+		for (auto au : au_intensities)
+		{
+			au_names_reg.push_back(au.first);
+		}
+
+		std::sort(au_names_reg.begin(), au_names_reg.end());
+
+		metadata_file << "Output csv:" << csv_filename << endl;
+		metadata_file << "Gaze: " << params.outputGaze() << endl;
+		metadata_file << "AUs: " << params.outputAUs() << endl;
+		metadata_file << "Landmarks 2D: " << params.output2DLandmarks() << endl;
+		metadata_file << "Landmarks 3D: " << params.output3DLandmarks() << endl;
+		metadata_file << "Pose: " << params.outputPose() << endl;
+		metadata_file << "Shape parameters: " << params.outputPDMParams() << endl;
+
+		csv_filename = (path(record_root) / csv_filename).string();
+		csv_recorder.Open(csv_filename, params.isSequence(), params.output2DLandmarks(), params.output3DLandmarks(), params.outputPDMParams(), params.outputPose(),
+			params.outputAUs(), params.outputGaze(), num_face_landmarks, num_model_modes, num_eye_landmarks, au_names_class, au_names_reg);
+	}
+
+	this->csv_recorder.WriteLine(observation_count, timestamp, landmark_detection_success, 
+		landmark_detection_confidence, landmarks_2D, landmarks_3D, pdm_params_local, pdm_params_global, head_pose,
+		gaze_direction0, gaze_direction1, gaze_angle, eye_landmarks2D, eye_landmarks3D, au_intensities, au_occurences);
+
+	if(params.outputHOG())
+	{
+		this->hog_recorder.Write();
+	}
+
+	// Write aligned faces
+	if (params.outputAlignedFaces())
+	{
+		char name[100];
+
+		// Filename is based on frame number
+		if(params.isSequence())
+			std::sprintf(name, "frame_det_%06d.bmp", observation_count);
+		else
+			std::sprintf(name, "face_det_%06d.bmp", observation_count);
+
+		// Construct the output filename
+		boost::filesystem::path slash("/");
+
+		std::string preferredSlash = slash.make_preferred().string();
+
+		string out_file = aligned_output_directory + preferredSlash + string(name);
+		bool write_success = cv::imwrite(out_file, aligned_face);
+
+		if (!write_success)
+		{
+			WARN_STREAM("Could not output similarity aligned image image");
+		}
+	}
+
+	if(params.outputTracked())
+	{
+		if (vis_to_out.empty())
+		{
+			WARN_STREAM("Output tracked video frame is not set");
+		}
+
+		if(params.isSequence() )
+		{
+			if(video_writer.isOpened())
+			{
+				video_writer.write(vis_to_out);
+			}
+		}
+		else
+		{
+			bool out_success = cv::imwrite(media_filename, vis_to_out);
+			if (!out_success)
+			{
+				WARN_STREAM("Could not output tracked image");
+			}
+		}
+		// Clear the output
+		vis_to_out = cv::Mat();
+	}
+}
+
+
+void RecorderOpenFace::SetObservationHOG(bool good_frame, const cv::Mat_<double>& hog_descriptor, int num_cols, int num_rows, int num_channels)
+{
+	this->hog_recorder.SetObservationHOG(good_frame, hog_descriptor, num_cols, num_rows, num_channels);
+}
+
+void RecorderOpenFace::SetObservationTimestamp(double timestamp)
+{
+	this->timestamp = timestamp;
+}
+
+void RecorderOpenFace::SetObservationLandmarks(const cv::Mat_<double>& landmarks_2D, const cv::Mat_<double>& landmarks_3D,
+	const cv::Vec6d& pdm_params_global, const cv::Mat_<double>& pdm_params_local, double confidence, bool success)
+{
+	this->landmarks_2D = landmarks_2D;
+	this->landmarks_3D = landmarks_3D;
+	this->pdm_params_global = pdm_params_global;
+	this->pdm_params_local = pdm_params_local;
+	this->landmark_detection_confidence = confidence;
+	this->landmark_detection_success = success;
+
+}
+
+void RecorderOpenFace::SetObservationPose(const cv::Vec6d& pose)
+{
+	this->head_pose = pose;
+}
+
+void RecorderOpenFace::SetObservationActionUnits(const std::vector<std::pair<std::string, double> >& au_intensities,
+	const std::vector<std::pair<std::string, double> >& au_occurences)
+{
+	this->au_intensities = au_intensities;
+	this->au_occurences = au_occurences;
+}
+
+void RecorderOpenFace::SetObservationGaze(const cv::Point3f& gaze_direction0, const cv::Point3f& gaze_direction1,
+	const cv::Vec2d& gaze_angle, const std::vector<cv::Point2d>& eye_landmarks2D, const std::vector<cv::Point3d>& eye_landmarks3D)
+{
+	this->gaze_direction0 = gaze_direction0;
+	this->gaze_direction1 = gaze_direction1;
+	this->gaze_angle = gaze_angle;
+	this->eye_landmarks2D = eye_landmarks2D;
+	this->eye_landmarks3D = eye_landmarks3D;
+}
+
+RecorderOpenFace::~RecorderOpenFace()
+{
+	this->Close();
+}
+
+
+void RecorderOpenFace::Close()
+{
+	hog_recorder.Close();
+	csv_recorder.Close();
+	video_writer.release();
+	metadata_file.close();
+
+}
+
+
+

lib/local/Utilities/src/RecorderOpenFaceParameters.cpp

@@ -0,0 +1,140 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#include "RecorderOpenFaceParameters.h"
+
+using namespace std;
+
+using namespace Utilities;
+
+RecorderOpenFaceParameters::RecorderOpenFaceParameters(std::vector<std::string> &arguments, bool sequence, bool from_webcam, float fx, float fy, float cx, float cy, double fps_vid_out)
+{
+
+	string separator = string(1, boost::filesystem::path::preferred_separator);
+
+	this->is_sequence = sequence;
+	this->is_from_webcam = from_webcam;
+	this->fx = fx;
+	this->fy = fy;
+	this->cx = cx;
+	this->cy = cy;
+
+	if(fps_vid_out > 0)
+	{
+		this->fps_vid_out = fps_vid_out;
+	}
+	else
+	{
+		this->fps_vid_out = 30; // If an illegal value for fps provided, default to 30
+	}
+	// Default output code
+	this->output_codec = "DIVX";
+
+	bool output_set = false;
+
+	output_2D_landmarks = false;
+	output_3D_landmarks = false;
+	output_model_params = false;
+	output_pose = false;
+	output_AUs = false;
+	output_gaze = false;
+	output_hog = false;
+	output_tracked = false;
+	output_aligned_faces = false;
+
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		if (arguments[i].compare("-simalign") == 0)
+		{
+			output_aligned_faces = true;
+			output_set = true;
+		}
+		else if (arguments[i].compare("-hogalign") == 0)
+		{
+			output_hog = true;
+			output_set = true;
+		}
+		else if (arguments[i].compare("-2Dfp") == 0)
+		{
+			output_2D_landmarks = true;
+			output_set = true;
+		}
+		else if (arguments[i].compare("-3Dfp") == 0)
+		{
+			output_3D_landmarks = true;
+			output_set = true;
+		}
+		else if (arguments[i].compare("-pdmparams") == 0)
+		{
+			output_model_params = true;
+			output_set = true;
+		}
+		else if (arguments[i].compare("-pose") == 0)
+		{
+			output_pose = true;
+			output_set = true;
+		}
+		else if (arguments[i].compare("-aus") == 0)
+		{
+			output_AUs = true;
+			output_set = true;
+		}
+		else if (arguments[i].compare("-gaze") == 0)
+		{
+			output_gaze = true;
+			output_set = true;
+		}
+		else if (arguments[i].compare("-tracked") == 0)
+		{
+			output_tracked = true;
+			output_set = true;
+		}
+	}
+
+	// Output everything if nothing has been set
+
+	if (!output_set)
+	{
+		output_2D_landmarks = true;
+		output_3D_landmarks = true;
+		output_model_params = true;
+		output_pose = true;
+		output_AUs = true;
+		output_gaze = true;
+		output_hog = true;
+		output_tracked = true;
+		output_aligned_faces = true;
+	}
+
+}
+

lib/local/Utilities/src/SequenceCapture.cpp

@@ -0,0 +1,461 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#include "SequenceCapture.h"
+#include "ImageManipulationHelpers.h"
+
+#include <iostream>
+
+// Boost includes
+#include <filesystem.hpp>
+#include <filesystem/fstream.hpp>
+#include <boost/algorithm/string.hpp>
+
+// OpenCV includes
+#include <opencv2/imgproc.hpp>
+
+// For timing
+#include <chrono>
+#include <ctime>
+
+using namespace Utilities;
+
+#define INFO_STREAM( stream ) \
+std::cout << stream << std::endl
+
+#define WARN_STREAM( stream ) \
+std::cout << "Warning: " << stream << std::endl
+
+#define ERROR_STREAM( stream ) \
+std::cout << "Error: " << stream << std::endl
+
+bool SequenceCapture::Open(std::vector<std::string>& arguments)
+{
+
+	// Consuming the input arguments
+	bool* valid = new bool[arguments.size()];
+
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		valid[i] = true;
+	}
+
+	// Some default values
+	std::string input_root = "";
+	fx = -1; fy = -1; cx = -1; cy = -1;
+	frame_num = 0;
+	time_stamp = 0;
+
+	std::string separator = std::string(1, boost::filesystem::path::preferred_separator);
+
+	// First check if there is a root argument (so that videos and input directories could be defined more easily)
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		if (arguments[i].compare("-root") == 0)
+		{
+			input_root = arguments[i + 1] + separator;
+			i++;
+		}
+		if (arguments[i].compare("-inroot") == 0)
+		{
+			input_root = arguments[i + 1] + separator;
+			i++;
+		}
+	}
+
+	std::string input_video_file;
+	std::string input_sequence_directory;
+	int device = -1;
+
+	bool file_found = false;
+
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		if (!file_found && arguments[i].compare("-f") == 0)
+		{
+			input_video_file = (input_root + arguments[i + 1]);
+			valid[i] = false;
+			valid[i + 1] = false;
+			i++;
+			file_found = true;
+		}
+		else if (!file_found && arguments[i].compare("-fdir") == 0)
+		{
+			input_sequence_directory = (input_root + arguments[i + 1]);
+			valid[i] = false;
+			valid[i + 1] = false;
+			i++;
+			file_found = true;
+		}
+		else if (arguments[i].compare("-fx") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> fx;
+			i++;
+		}
+		else if (arguments[i].compare("-fy") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> fy;
+			i++;
+		}
+		else if (arguments[i].compare("-cx") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> cx;
+			i++;
+		}
+		else if (arguments[i].compare("-cy") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> cy;
+			i++;
+		}
+		else if (arguments[i].compare("-device") == 0)
+		{
+			std::stringstream data(arguments[i + 1]);
+			data >> device;
+			valid[i] = false;
+			valid[i + 1] = false;
+			i++;
+		}
+	}
+
+	for (int i = (int)arguments.size() - 1; i >= 0; --i)
+	{
+		if (!valid[i])
+		{
+			arguments.erase(arguments.begin() + i);
+		}
+	}	
+	
+	no_input_specified = !file_found;
+
+	// Based on what was read in open the sequence
+	if (device != -1)
+	{
+		// TODO allow to specify webcam resolution
+		return OpenWebcam(device, 640, 480, fx, fy, cx, cy);
+	}
+	if (!input_video_file.empty())
+	{
+		return OpenVideoFile(input_video_file, fx, fy, cx, cy);
+	}
+	if (!input_sequence_directory.empty())
+	{
+		return OpenImageSequence(input_sequence_directory, fx, fy, cx, cy);
+	}
+
+	// If no input found return false and set a flag for it
+	no_input_specified = true;
+
+	return false;
+}
+
+// Get current date/time, format is YYYY-MM-DD.HH:mm, useful for saving data from webcam
+const std::string currentDateTime() 
+{
+
+	time_t rawtime;
+	struct tm * timeinfo;
+	char buffer[80];
+
+	time(&rawtime);
+	timeinfo = localtime(&rawtime);
+
+	strftime(buffer, sizeof(buffer), "%Y-%m-%d-%H-%M", timeinfo);
+
+	return buffer;
+}
+
+
+bool SequenceCapture::OpenWebcam(int device, int image_width, int image_height, float fx, float fy, float cx, float cy)
+{
+	INFO_STREAM("Attempting to read from webcam: " << device);
+
+	no_input_specified = false;
+
+	if (device < 0)
+	{
+		std::cout << "Specify a valid device" << std::endl;
+		return false;
+	}
+
+	latest_frame = cv::Mat();
+	latest_gray_frame = cv::Mat();
+
+	capture.open(device);
+	capture.set(CV_CAP_PROP_FRAME_WIDTH, image_width);
+	capture.set(CV_CAP_PROP_FRAME_HEIGHT, image_height);
+
+	is_webcam = true;
+	is_image_seq = false;
+
+	vid_length = 0;
+
+	this->frame_width = (int)capture.get(CV_CAP_PROP_FRAME_WIDTH);
+	this->frame_height = (int)capture.get(CV_CAP_PROP_FRAME_HEIGHT);
+
+	if (!capture.isOpened())
+	{
+		std::cout << "Failed to open the webcam" << std::endl;
+		return false;
+	}
+	if (frame_width != image_width || frame_height != image_height)
+	{
+		std::cout << "Failed to open the webcam with desired resolution" << std::endl;
+		std::cout << "Defaulting to " << frame_width << "x" << frame_height << std::endl;
+	}
+
+	this->fps = capture.get(CV_CAP_PROP_FPS);
+
+	// Check if fps is nan or less than 0
+	if (fps != fps || fps <= 0)
+	{
+		INFO_STREAM("FPS of the webcam cannot be determined, assuming 30");
+		fps = 30;
+	}
+
+	SetCameraIntrinsics(fx, fy, cx, cy);
+	std::string time = currentDateTime();
+	this->name = "webcam_" + time;
+
+	start_time = cv::getTickCount();
+
+	return true;
+
+}
+
+// Destructor that releases the capture
+SequenceCapture::~SequenceCapture()
+{
+	if (capture.isOpened())
+		capture.release();
+}
+
+bool SequenceCapture::OpenVideoFile(std::string video_file, float fx, float fy, float cx, float cy)
+{
+	INFO_STREAM("Attempting to read from file: " << video_file);
+
+	no_input_specified = false;
+
+	latest_frame = cv::Mat();
+	latest_gray_frame = cv::Mat();
+
+	capture.open(video_file);
+
+	if (!capture.isOpened())
+	{
+		std::cout << "Failed to open the video file at location: " << video_file << std::endl;
+		return false;
+	}
+
+	this->fps = capture.get(CV_CAP_PROP_FPS);
+	
+	// Check if fps is nan or less than 0
+	if (fps != fps || fps <= 0)
+	{
+		WARN_STREAM("FPS of the video file cannot be determined, assuming 30");
+		fps = 30;
+	}
+
+	is_webcam = false;
+	is_image_seq = false;
+	
+	this->frame_width = (int)capture.get(CV_CAP_PROP_FRAME_WIDTH);
+	this->frame_height = (int)capture.get(CV_CAP_PROP_FRAME_HEIGHT);
+
+	vid_length = (int)capture.get(CV_CAP_PROP_FRAME_COUNT);
+
+	SetCameraIntrinsics(fx, fy, cx, cy);
+
+	this->name = video_file;
+
+	return true;
+
+}
+
+bool SequenceCapture::OpenImageSequence(std::string directory, float fx, float fy, float cx, float cy)
+{
+	INFO_STREAM("Attempting to read from directory: " << directory);
+
+	no_input_specified = false;
+
+	image_files.clear();
+
+	boost::filesystem::path image_directory(directory);
+	std::vector<boost::filesystem::path> file_in_directory;
+	copy(boost::filesystem::directory_iterator(image_directory), boost::filesystem::directory_iterator(), back_inserter(file_in_directory));
+
+	// Sort the images in the directory first
+	sort(file_in_directory.begin(), file_in_directory.end());
+
+	std::vector<std::string> curr_dir_files;
+
+	for (std::vector<boost::filesystem::path>::const_iterator file_iterator(file_in_directory.begin()); file_iterator != file_in_directory.end(); ++file_iterator)
+	{
+		// Possible image extension .jpg and .png
+		if (file_iterator->extension().string().compare(".jpg") == 0 || file_iterator->extension().string().compare(".jpeg") == 0  || file_iterator->extension().string().compare(".png") == 0 || file_iterator->extension().string().compare(".bmp") == 0)
+		{
+			curr_dir_files.push_back(file_iterator->string());
+		}
+	}
+
+	image_files = curr_dir_files;
+
+	if (image_files.empty())
+	{
+		std::cout << "No images found in the directory: " << directory << std::endl;
+		return false;
+	}
+
+	// Assume all images are same size in an image sequence
+	cv::Mat tmp = cv::imread(image_files[0], CV_LOAD_IMAGE_COLOR);
+	this->frame_height = tmp.size().height;
+	this->frame_width = tmp.size().width;
+
+	SetCameraIntrinsics(fx, fy, cx, cy);
+
+	// No fps as we have a sequence
+	this->fps = 0;
+
+	this->name = directory;
+
+	is_webcam = false;
+	is_image_seq = true;	
+	vid_length = image_files.size();
+
+	return true;
+
+}
+
+void SequenceCapture::SetCameraIntrinsics(float fx, float fy, float cx, float cy)
+{
+	// If optical centers are not defined just use center of image
+	if (cx == -1)
+	{
+		this->cx = this->frame_width / 2.0f;
+		this->cy = this->frame_height / 2.0f;
+	}
+	else
+	{
+		this->cx = cx;
+		this->cy = cy;
+	}
+	// Use a rough guess-timate of focal length
+	if (fx == -1)
+	{
+		this->fx = 500.0f * (this->frame_width / 640.0f);
+		this->fy = 500.0f * (this->frame_height / 480.0f);
+
+		this->fx = (this->fx + this->fy) / 2.0f;
+		this->fy = this->fx;
+	}
+	else
+	{
+		this->fx = fx;
+		this->fy = fy;
+	}
+}
+
+cv::Mat SequenceCapture::GetNextFrame()
+{
+
+	if (is_webcam || !is_image_seq)
+	{
+
+		bool success = capture.read(latest_frame);
+
+		if (!success)
+		{
+			// Indicate lack of success by returning an empty image
+			latest_frame = cv::Mat();
+		}
+
+		// Recording the timestamp
+		if (!is_webcam)
+		{
+			time_stamp = frame_num * (1.0 / fps);
+		}
+		else
+		{
+			time_stamp = (cv::getTickCount() - start_time) / cv::getTickFrequency();
+		}
+
+	}
+	else if (is_image_seq)
+	{
+		if (image_files.empty() || frame_num >= image_files.size())
+		{
+			// Indicate lack of success by returning an empty image
+			latest_frame = cv::Mat();
+		}
+		else
+		{
+			latest_frame = cv::imread(image_files[frame_num], CV_LOAD_IMAGE_COLOR);			
+		}
+		time_stamp = 0;
+	}
+	
+	// Set the grayscale frame
+	ConvertToGrayscale_8bit(latest_frame, latest_gray_frame);
+
+	frame_num++;
+
+	return latest_frame;
+}
+
+double SequenceCapture::GetProgress()
+{
+	if (is_webcam)
+	{
+		return -1.0;
+	}
+	else
+	{
+		return (double)frame_num / (double)vid_length;
+	}
+}
+
+bool SequenceCapture::IsOpened()
+{
+	if (is_webcam || !is_image_seq)
+		return capture.isOpened();
+	else
+		return (image_files.size() > 0 && frame_num < image_files.size());
+}
+
+cv::Mat_<uchar> SequenceCapture::GetGrayFrame() 
+{
+	return latest_gray_frame;
+}

lib/local/Utilities/src/VisualizationUtils.cpp

@@ -0,0 +1,191 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#include "VisualizationUtils.h"
+#include "RotationHelpers.h"
+
+// For FHOG visualisation
+#include <dlib/opencv.h>
+#include <dlib/image_processing/frontal_face_detector.h>
+
+// For drawing on images
+#include <opencv2/imgproc.hpp>
+
+namespace Utilities
+{
+
+	FpsTracker::FpsTracker()
+	{
+		// Keep two seconds of history
+		history_length = 2;
+	}
+
+	void FpsTracker::AddFrame()
+	{
+		double current_time = cv::getTickCount() / cv::getTickFrequency();
+		frame_times.push(current_time);
+		DiscardOldFrames();
+	}
+
+	double FpsTracker::GetFPS()
+	{
+		DiscardOldFrames();
+
+		if (frame_times.size() == 0)
+			return 0;
+
+		double current_time = cv::getTickCount() / cv::getTickFrequency();
+
+		return ((double)frame_times.size()) / (current_time - frame_times.front());
+	}
+
+	void FpsTracker::DiscardOldFrames()
+	{
+		double current_time = cv::getTickCount() / cv::getTickFrequency();
+		// Remove old history
+		while (frame_times.size() > 0 && (current_time - frame_times.front()) > history_length)
+			frame_times.pop();
+	}
+
+	void DrawBox(cv::Mat image, cv::Vec6d pose, cv::Scalar color, int thickness, float fx, float fy, float cx, float cy)
+	{
+		auto edge_lines = CalculateBox(pose, fx, fy, cx, cy);
+		DrawBox(edge_lines, image, color, thickness);
+	}
+
+	std::vector<std::pair<cv::Point2d, cv::Point2d>> CalculateBox(cv::Vec6d pose, float fx, float fy, float cx, float cy)
+	{
+		double boxVerts[] = { -1, 1, -1,
+			1, 1, -1,
+			1, 1, 1,
+			-1, 1, 1,
+			1, -1, 1,
+			1, -1, -1,
+			-1, -1, -1,
+			-1, -1, 1 };
+
+		std::vector<std::pair<int, int>> edges;
+		edges.push_back(std::pair<int, int>(0, 1));
+		edges.push_back(std::pair<int, int>(1, 2));
+		edges.push_back(std::pair<int, int>(2, 3));
+		edges.push_back(std::pair<int, int>(0, 3));
+		edges.push_back(std::pair<int, int>(2, 4));
+		edges.push_back(std::pair<int, int>(1, 5));
+		edges.push_back(std::pair<int, int>(0, 6));
+		edges.push_back(std::pair<int, int>(3, 7));
+		edges.push_back(std::pair<int, int>(6, 5));
+		edges.push_back(std::pair<int, int>(5, 4));
+		edges.push_back(std::pair<int, int>(4, 7));
+		edges.push_back(std::pair<int, int>(7, 6));
+
+		// The size of the head is roughly 200mm x 200mm x 200mm
+		cv::Mat_<double> box = cv::Mat(8, 3, CV_64F, boxVerts).clone() * 100;
+
+		cv::Matx33d rot = Euler2RotationMatrix(cv::Vec3d(pose[3], pose[4], pose[5]));
+		cv::Mat_<double> rotBox;
+
+		// Rotate the box
+		rotBox = cv::Mat(rot) * box.t();
+		rotBox = rotBox.t();
+
+		// Move the bounding box to head position
+		rotBox.col(0) = rotBox.col(0) + pose[0];
+		rotBox.col(1) = rotBox.col(1) + pose[1];
+		rotBox.col(2) = rotBox.col(2) + pose[2];
+
+		// draw the lines
+		cv::Mat_<double> rotBoxProj;
+		Project(rotBoxProj, rotBox, fx, fy, cx, cy);
+
+		std::vector<std::pair<cv::Point2d, cv::Point2d>> lines;
+
+		for (size_t i = 0; i < edges.size(); ++i)
+		{
+			cv::Mat_<double> begin;
+			cv::Mat_<double> end;
+
+			rotBoxProj.row(edges[i].first).copyTo(begin);
+			rotBoxProj.row(edges[i].second).copyTo(end);
+
+			cv::Point2d p1(begin.at<double>(0), begin.at<double>(1));
+			cv::Point2d p2(end.at<double>(0), end.at<double>(1));
+
+			lines.push_back(std::pair<cv::Point2d, cv::Point2d>(p1, p2));
+
+		}
+
+		return lines;
+	}
+
+	void DrawBox(const std::vector<std::pair<cv::Point2d, cv::Point2d>>& lines, cv::Mat image, cv::Scalar color, int thickness)
+	{
+		cv::Rect image_rect(0, 0, image.cols, image.rows);
+
+		for (size_t i = 0; i < lines.size(); ++i)
+		{
+			cv::Point2d p1 = lines.at(i).first;
+			cv::Point2d p2 = lines.at(i).second;
+			// Only draw the line if one of the points is inside the image
+			if (p1.inside(image_rect) || p2.inside(image_rect))
+			{
+				cv::line(image, p1, p2, color, thickness, CV_AA);
+			}
+
+		}
+
+	}
+
+	void Visualise_FHOG(const cv::Mat_<double>& descriptor, int num_rows, int num_cols, cv::Mat& visualisation)
+	{
+
+		// First convert to dlib format
+		dlib::array2d<dlib::matrix<float, 31, 1> > hog(num_rows, num_cols);
+
+		cv::MatConstIterator_<double> descriptor_it = descriptor.begin();
+		for (int y = 0; y < num_cols; ++y)
+		{
+			for (int x = 0; x < num_rows; ++x)
+			{
+				for (unsigned int o = 0; o < 31; ++o)
+				{
+					hog[y][x](o) = *descriptor_it++;
+				}
+			}
+		}
+
+		// Draw the FHOG to OpenCV format
+		auto fhog_vis = dlib::draw_fhog(hog);
+		visualisation = dlib::toMat(fhog_vis).clone();
+	}
+
+}

lib/local/Utilities/src/Visualizer.cpp

@@ -0,0 +1,294 @@
+///////////////////////////////////////////////////////////////////////////////
+// Copyright (C) 2017, Tadas Baltrusaitis, all rights reserved.
+//
+// ACADEMIC OR NON-PROFIT ORGANIZATION NONCOMMERCIAL RESEARCH USE ONLY
+//
+// BY USING OR DOWNLOADING THE SOFTWARE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT.  
+// IF YOU DO NOT AGREE WITH THESE TERMS, YOU MAY NOT USE OR DOWNLOAD THE SOFTWARE.
+//
+// License can be found in OpenFace-license.txt
+//
+//     * Any publications arising from the use of this software, including but
+//       not limited to academic journal and conference publications, technical
+//       reports and manuals, must cite at least one of the following works:
+//
+//       OpenFace: an open source facial behavior analysis toolkit
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency
+//       in IEEE Winter Conference on Applications of Computer Vision, 2016  
+//
+//       Rendering of Eyes for Eye-Shape Registration and Gaze Estimation
+//       Erroll Wood, Tadas Baltrušaitis, Xucong Zhang, Yusuke Sugano, Peter Robinson, and Andreas Bulling 
+//       in IEEE International. Conference on Computer Vision (ICCV),  2015 
+//
+//       Cross-dataset learning and person-speci?c normalisation for automatic Action Unit detection
+//       Tadas Baltrušaitis, Marwa Mahmoud, and Peter Robinson 
+//       in Facial Expression Recognition and Analysis Challenge, 
+//       IEEE International Conference on Automatic Face and Gesture Recognition, 2015 
+//
+//       Constrained Local Neural Fields for robust facial landmark detection in the wild.
+//       Tadas Baltrušaitis, Peter Robinson, and Louis-Philippe Morency. 
+//       in IEEE Int. Conference on Computer Vision Workshops, 300 Faces in-the-Wild Challenge, 2013.    
+//
+///////////////////////////////////////////////////////////////////////////////
+
+#include "Visualizer.h"
+#include "VisualizationUtils.h"
+#include "RotationHelpers.h"
+#include "ImageManipulationHelpers.h"
+
+// For drawing on images
+#include <opencv2/imgproc.hpp>
+
+using namespace Utilities;
+
+// For subpixel accuracy drawing
+const int draw_shiftbits = 4;
+const int draw_multiplier = 1 << 4;
+
+Visualizer::Visualizer(std::vector<std::string> arguments)
+{
+	// By default not visualizing anything
+	this->vis_track = false;
+	this->vis_hog = false;
+	this->vis_align = false;
+
+	for (size_t i = 0; i < arguments.size(); ++i)
+	{
+		if (arguments[i].compare("-verbose") == 0)
+		{
+			vis_track = true;
+			vis_align = true;
+			vis_hog = true;
+		}
+		else if (arguments[i].compare("-vis-align") == 0)
+		{
+			vis_align = true;
+		}
+		else if (arguments[i].compare("-vis-hog") == 0)
+		{
+			vis_hog = true;
+		}
+		else if (arguments[i].compare("-vis-track") == 0)
+		{
+			vis_track = true;
+		}
+	}
+
+}
+
+Visualizer::Visualizer(bool vis_track, bool vis_hog, bool vis_align)
+{
+	this->vis_track = vis_track;
+	this->vis_hog = vis_hog;
+	this->vis_align = vis_align;
+}
+
+
+
+// Setting the image on which to draw
+void Visualizer::SetImage(const cv::Mat& canvas, float fx, float fy, float cx, float cy)
+{
+	// Convert the image to 8 bit RGB
+	captured_image = canvas.clone();
+
+	this->fx = fx;
+	this->fy = fy;
+	this->cx = cx;
+	this->cy = cy;
+
+	// Clearing other images
+	hog_image = cv::Mat();
+	aligned_face_image = cv::Mat();
+
+}
+
+
+void Visualizer::SetObservationFaceAlign(const cv::Mat& aligned_face)
+{
+	if(this->aligned_face_image.empty())
+	{
+		this->aligned_face_image = aligned_face;
+	}
+	else
+	{
+		cv::vconcat(this->aligned_face_image, aligned_face, this->aligned_face_image);
+	}
+}
+
+void Visualizer::SetObservationHOG(const cv::Mat_<double>& hog_descriptor, int num_cols, int num_rows)
+{
+	if(vis_hog)
+	{
+		if (this->hog_image.empty())
+		{
+			Visualise_FHOG(hog_descriptor, num_rows, num_cols, this->hog_image);
+		}
+		else
+		{
+			cv::Mat tmp_hog;
+			Visualise_FHOG(hog_descriptor, num_rows, num_cols, tmp_hog);
+			cv::vconcat(this->hog_image, tmp_hog, this->hog_image);
+		}
+	}
+
+}
+
+
+void Visualizer::SetObservationLandmarks(const cv::Mat_<double>& landmarks_2D, double confidence, bool success, const cv::Mat_<int>& visibilities)
+{
+
+	if(confidence > visualisation_boundary)
+	{
+		// Draw 2D landmarks on the image
+		int n = landmarks_2D.rows / 2;
+
+		// Drawing feature points
+		for (int i = 0; i < n; ++i)
+		{
+			if (visibilities.empty() || visibilities.at<int>(i))
+			{
+				cv::Point featurePoint(cvRound(landmarks_2D.at<double>(i) * (double)draw_multiplier), cvRound(landmarks_2D.at<double>(i + n) * (double)draw_multiplier));
+
+				// A rough heuristic for drawn point size
+				int thickness = (int)std::ceil(3.0* ((double)captured_image.cols) / 640.0);
+				int thickness_2 = (int)std::ceil(1.0* ((double)captured_image.cols) / 640.0);
+
+				cv::circle(captured_image, featurePoint, 1 * draw_multiplier, cv::Scalar(0, 0, 255), thickness, CV_AA, draw_shiftbits);
+				cv::circle(captured_image, featurePoint, 1 * draw_multiplier, cv::Scalar(255, 0, 0), thickness_2, CV_AA, draw_shiftbits);
+
+			}
+		}
+	}
+}
+
+void Visualizer::SetObservationPose(const cv::Vec6d& pose, double confidence)
+{
+
+
+
+	// Only draw if the reliability is reasonable, the value is slightly ad-hoc
+	if (confidence > visualisation_boundary)
+	{
+		double vis_certainty = confidence;
+		if (vis_certainty > 1)
+			vis_certainty = 1;
+
+		// Scale from 0 to 1, to allow to indicated by colour how confident we are in the tracking
+		vis_certainty = (vis_certainty - visualisation_boundary) / (1 - visualisation_boundary);
+
+		// A rough heuristic for box around the face width
+		int thickness = (int)std::ceil(2.0* ((double)captured_image.cols) / 640.0);
+
+		// Draw it in reddish if uncertain, blueish if certain
+		DrawBox(captured_image, pose, cv::Scalar(vis_certainty*255.0, 0, (1 - vis_certainty) * 255), thickness, fx, fy, cx, cy);
+	}
+}
+
+// Eye gaze infomration drawing, first of eye landmarks then of gaze
+void Visualizer::SetObservationGaze(const cv::Point3f& gaze_direction0, const cv::Point3f& gaze_direction1, const std::vector<cv::Point2d>& eye_landmarks2d, const std::vector<cv::Point3d>& eye_landmarks3d, double confidence)
+{
+	if(confidence > visualisation_boundary)
+	{
+		if (eye_landmarks2d.size() > 0)
+		{
+			// First draw the eye region landmarks
+			for (size_t i = 0; i < eye_landmarks2d.size(); ++i)
+			{
+				cv::Point featurePoint(cvRound(eye_landmarks2d[i].x * (double)draw_multiplier), cvRound(eye_landmarks2d[i].y * (double)draw_multiplier));
+
+				// A rough heuristic for drawn point size
+				int thickness = 1;
+				int thickness_2 = 1;
+
+				size_t next_point = i + 1;
+				if (i == 7)
+					next_point = 0;
+				if (i == 19)
+					next_point = 8;
+				if (i == 27)
+					next_point = 20;
+
+				if (i == 7 + 28)
+					next_point = 0 + 28;
+				if (i == 19 + 28)
+					next_point = 8 + 28;
+				if (i == 27 + 28)
+					next_point = 20 + 28;
+
+				cv::Point nextFeaturePoint(cvRound(eye_landmarks2d[next_point].x * (double)draw_multiplier), cvRound(eye_landmarks2d[next_point].y * (double)draw_multiplier));
+				if ((i < 28 && (i < 8 || i > 19)) || (i >= 28 && (i < 8 + 28 || i > 19 + 28)))
+					cv::line(captured_image, featurePoint, nextFeaturePoint, cv::Scalar(255, 0, 0), thickness_2, CV_AA, draw_shiftbits);
+				else
+					cv::line(captured_image, featurePoint, nextFeaturePoint, cv::Scalar(0, 0, 255), thickness_2, CV_AA, draw_shiftbits);
+
+			}
+
+			// Now draw the gaze lines themselves
+			cv::Mat cameraMat = (cv::Mat_<double>(3, 3) << fx, 0, cx, 0, fy, cy, 0, 0, 0);
+
+			// Grabbing the pupil location, to draw eye gaze need to know where the pupil is
+			cv::Point3d pupil_left(0, 0, 0);
+			cv::Point3d pupil_right(0, 0, 0);
+			for (size_t i = 0; i < 8; ++i)
+			{
+				pupil_left = pupil_left + eye_landmarks3d[i];
+				pupil_right = pupil_right + eye_landmarks3d[i + eye_landmarks3d.size()/2];
+			}
+			pupil_left = pupil_left / 8;
+			pupil_right = pupil_right / 8;
+
+			std::vector<cv::Point3d> points_left;
+			points_left.push_back(cv::Point3d(pupil_left));
+			points_left.push_back(cv::Point3d(pupil_left + cv::Point3d(gaze_direction0)*50.0));
+
+			std::vector<cv::Point3d> points_right;
+			points_right.push_back(cv::Point3d(pupil_right));
+			points_right.push_back(cv::Point3d(pupil_right + cv::Point3d(gaze_direction1)*50.0));
+
+			cv::Mat_<double> proj_points;
+			cv::Mat_<double> mesh_0 = (cv::Mat_<double>(2, 3) << points_left[0].x, points_left[0].y, points_left[0].z, points_left[1].x, points_left[1].y, points_left[1].z);
+			Project(proj_points, mesh_0, fx, fy, cx, cy);
+			cv::line(captured_image, cv::Point(cvRound(proj_points.at<double>(0, 0) * (double)draw_multiplier), cvRound(proj_points.at<double>(0, 1) * (double)draw_multiplier)),
+				cv::Point(cvRound(proj_points.at<double>(1, 0) * (double)draw_multiplier), cvRound(proj_points.at<double>(1, 1) * (double)draw_multiplier)), cv::Scalar(110, 220, 0), 2, CV_AA, draw_shiftbits);
+
+			cv::Mat_<double> mesh_1 = (cv::Mat_<double>(2, 3) << points_right[0].x, points_right[0].y, points_right[0].z, points_right[1].x, points_right[1].y, points_right[1].z);
+			Project(proj_points, mesh_1, fx, fy, cx, cy);
+			cv::line(captured_image, cv::Point(cvRound(proj_points.at<double>(0, 0) * (double)draw_multiplier), cvRound(proj_points.at<double>(0, 1) * (double)draw_multiplier)),
+				cv::Point(cvRound(proj_points.at<double>(1, 0) * (double)draw_multiplier), cvRound(proj_points.at<double>(1, 1) * (double)draw_multiplier)), cv::Scalar(110, 220, 0), 2, CV_AA, draw_shiftbits);
+
+		}
+	}
+}
+
+void Visualizer::SetFps(double fps)
+{
+	// Write out the framerate on the image before displaying it
+	char fpsC[255];
+	std::sprintf(fpsC, "%d", (int)fps);
+	std::string fpsSt("FPS:");
+	fpsSt += fpsC;
+	cv::putText(captured_image, fpsSt, cv::Point(10, 20), CV_FONT_HERSHEY_SIMPLEX, 0.5, CV_RGB(255, 0, 0), 1, CV_AA);
+}
+
+char Visualizer::ShowObservation()
+{
+	if (vis_track)
+	{
+		cv::namedWindow("tracking_result", 1);
+		cv::imshow("tracking_result", captured_image);
+	}
+	if (vis_align)
+	{
+		cv::imshow("sim_warp", aligned_face_image);
+	}
+	if (vis_hog)
+	{
+		cv::imshow("hog", hog_image);
+	}
+	return cv::waitKey(1);
+}
+
+cv::Mat Visualizer::GetVisImage()
+{
+	return captured_image;
+}

matlab_runners/Action Unit Experiments/helpers/extract_SEMAINE_labels.m

@@ -1,4 +1,4 @@
-function [ labels, valid_ids, vid_ids  ] = extract_SEMAINE_labels( SEMAINE_dir, recs, aus )
+function [ labels, valid_ids, vid_ids, vid_names  ] = extract_SEMAINE_labels( SEMAINE_dir, recs, aus )
 %EXTRACT_SEMAINE_LABELS Summary of this function goes here
 %   Detailed explanation goes here
 
@@ -16,6 +16,7 @@ function [ labels, valid_ids, vid_ids  ] = extract_SEMAINE_labels( SEMAINE_dir,
     
     labels = cell(numel(recs), 1);
     valid_ids = cell(numel(recs), 1);
+    vid_names = cell(numel(recs), 1);
     vid_ids = zeros(numel(recs), 2);
     
     for i=1:numel(recs)
@@ -24,6 +25,9 @@ function [ labels, valid_ids, vid_ids  ] = extract_SEMAINE_labels( SEMAINE_dir,
         
         vid_ids(i,:) = dlmread([SEMAINE_dir, '/', recs{i}, '.txt'], ' ');
         
+        vid_names_c = dir([SEMAINE_dir, '/', recs{i}, '/*.avi']);
+        [~, vid_names{i},~] = fileparts(vid_names_c.name);
+        
         xml_file = [SEMAINE_dir, recs{i}, '\' file.name];
         [root_xml, name_xml, ~] = fileparts(xml_file);
             

matlab_runners/Action Unit Experiments/helpers/find_BP4D.m

@@ -16,6 +16,9 @@ elseif(exist('I:\datasets\FERA_2015\BP4D\AUCoding/', 'file'))
 elseif(exist('D:/fera_2015/bp4d/AUCoding/', 'file'))
     BP4D_dir = 'D:/fera_2015/bp4d/AUCoding/';
     BP4D_dir_int = 'D:/fera_2015/bp4d/AU Intensity Codes3.0/';
+elseif(exist('/media/tadas/2EBEA130BEA0F20F/datasets/FERA_2015/BP4D', 'file'))
+    BP4D_dir = '/media/tadas/2EBEA130BEA0F20F/datasets/FERA_2015/BP4D/AUCoding/';
+    BP4D_dir_int = '/media/tadas/2EBEA130BEA0F20F/datasets/FERA_2015/BP4D/AU Intensity Codes3.0/';
 else    
     fprintf('BP4D location not found (or not defined)\n'); 
 end

matlab_runners/Action Unit Experiments/helpers/find_Bosphorus.m

@@ -2,6 +2,8 @@ if(exist('D:/Datasets/Bosphorus/', 'file'))
     Bosphorus_dir = 'D:\Datasets\Bosphorus/';   
 elseif(exist('E:/Datasets/Bosphorus/', 'file'))
     Bosphorus_dir = 'E:\Datasets\Bosphorus/';   
+elseif(exist('/media/tadas/2EBEA130BEA0F20F/datasets/Bosphorus/', 'file'))
+    Bosphorus_dir = '/media/tadas/2EBEA130BEA0F20F/datasets/Bosphorus/';   
 else
     fprintf('Bosphorus dataset location not found (or not defined)\n'); 
 end

matlab_runners/Action Unit Experiments/helpers/find_FERA2011.m

@@ -4,6 +4,8 @@ elseif(exist('/multicomp/datasets/fera2011/', 'file'))
     FERA2011_dir = '/multicomp/datasets/fera2011/au_training/';   
 elseif(exist('E:\Datasets\fera/au_training', 'file'))
     FERA2011_dir = 'E:\Datasets\fera/au_training/';  
+elseif(exist('/media/tadas/2EBEA130BEA0F20F/datasets/fera/au_training/', 'file'))
+    FERA2011_dir = '/media/tadas/2EBEA130BEA0F20F/datasets/fera/au_training/';  
 else
     fprintf('FERA2011 location not found (or not defined)\n'); 
 end

matlab_runners/Action Unit Experiments/helpers/find_SEMAINE.m

@@ -12,6 +12,8 @@ elseif(exist('D:/fera_2015/semaine/SEMAINE-Sessions/', 'file'))
     SEMAINE_dir = 'D:/fera_2015/semaine/SEMAINE-Sessions/';
 elseif(exist('/multicomp/datasets/face_datasets/FERA_2015/Semaine/SEMAINE-Sessions/', 'file'))
     SEMAINE_dir = '/multicomp/datasets/face_datasets/FERA_2015/Semaine/SEMAINE-Sessions/';
+elseif(exist('/media/tadas/2EBEA130BEA0F20F/datasets/FERA_2015/semaine/SEMAINE-Sessions/', 'file'))
+    SEMAINE_dir = '/media/tadas/2EBEA130BEA0F20F/datasets/FERA_2015/semaine/SEMAINE-Sessions/';
 else
     fprintf('SEMAINE location not found (or not defined)\n'); 
 end

matlab_runners/Action Unit Experiments/results/BP4D_valid_res_class.txt

@@ -1,5 +1,5 @@
 AU1 class, Precision - 0.555, Recall - 0.533, F1 - 0.544
-AU2 class, Precision - 0.403, Recall - 0.440, F1 - 0.420
+AU2 class, Precision - 0.403, Recall - 0.439, F1 - 0.420
 AU4 class, Precision - 0.491, Recall - 0.513, F1 - 0.502
 AU6 class, Precision - 0.741, Recall - 0.776, F1 - 0.758
 AU7 class, Precision - 0.764, Recall - 0.727, F1 - 0.745

matlab_runners/Action Unit Experiments/results/Bosphorus_res_class.txt

@@ -1,17 +1,17 @@
-AU1 class, Precision - 0.393, Recall - 0.727, F1 - 0.510
+AU1 class, Precision - 0.434, Recall - 0.673, F1 - 0.528
-AU2 class, Precision - 0.266, Recall - 0.850, F1 - 0.405
+AU2 class, Precision - 0.298, Recall - 0.818, F1 - 0.437
-AU4 class, Precision - 0.511, Recall - 0.874, F1 - 0.645
+AU4 class, Precision - 0.564, Recall - 0.861, F1 - 0.681
-AU5 class, Precision - 0.294, Recall - 0.968, F1 - 0.451
+AU5 class, Precision - 0.387, Recall - 0.915, F1 - 0.544
-AU6 class, Precision - 0.346, Recall - 0.833, F1 - 0.489
+AU6 class, Precision - 0.355, Recall - 0.811, F1 - 0.494
-AU7 class, Precision - 0.793, Recall - 0.750, F1 - 0.771
+AU7 class, Precision - 0.778, Recall - 0.783, F1 - 0.780
-AU9 class, Precision - 0.316, Recall - 0.960, F1 - 0.475
+AU9 class, Precision - 0.370, Recall - 0.953, F1 - 0.533
-AU10 class, Precision - 0.349, Recall - 0.773, F1 - 0.481
+AU10 class, Precision - 0.340, Recall - 0.788, F1 - 0.475
-AU12 class, Precision - 0.674, Recall - 0.864, F1 - 0.757
+AU12 class, Precision - 0.690, Recall - 0.842, F1 - 0.758
-AU14 class, Precision - 0.183, Recall - 0.863, F1 - 0.302
+AU14 class, Precision - 0.185, Recall - 0.881, F1 - 0.305
-AU15 class, Precision - 0.183, Recall - 0.851, F1 - 0.302
+AU15 class, Precision - 0.171, Recall - 0.851, F1 - 0.285
-AU17 class, Precision - 0.293, Recall - 0.889, F1 - 0.441
+AU17 class, Precision - 0.309, Recall - 0.861, F1 - 0.455
-AU20 class, Precision - 0.114, Recall - 0.930, F1 - 0.203
+AU20 class, Precision - 0.130, Recall - 0.921, F1 - 0.228
-AU23 class, Precision - 0.107, Recall - 0.889, F1 - 0.191
+AU23 class, Precision - 0.104, Recall - 0.837, F1 - 0.186
-AU25 class, Precision - 0.860, Recall - 0.873, F1 - 0.866
+AU25 class, Precision - 0.869, Recall - 0.860, F1 - 0.865
-AU26 class, Precision - 0.359, Recall - 0.811, F1 - 0.498
+AU26 class, Precision - 0.368, Recall - 0.809, F1 - 0.506
-AU45 class, Precision - 0.318, Recall - 0.771, F1 - 0.450
+AU45 class, Precision - 0.367, Recall - 0.754, F1 - 0.494

matlab_runners/Action Unit Experiments/results/Bosphorus_res_int.txt

@@ -1,17 +1,17 @@
-AU1 intensity, Corr - 0.717, RMS - 0.892, CCC - 0.668
+AU1 intensity, Corr - 0.712, RMS - 0.925, CCC - 0.652
-AU2 intensity, Corr - 0.696, RMS - 0.774, CCC - 0.625
+AU2 intensity, Corr - 0.696, RMS - 0.772, CCC - 0.626
-AU4 intensity, Corr - 0.802, RMS - 0.603, CCC - 0.776
+AU4 intensity, Corr - 0.797, RMS - 0.623, CCC - 0.764
-AU5 intensity, Corr - 0.747, RMS - 0.832, CCC - 0.640
+AU5 intensity, Corr - 0.767, RMS - 0.740, CCC - 0.694
-AU6 intensity, Corr - 0.556, RMS - 0.735, CCC - 0.533
+AU6 intensity, Corr - 0.541, RMS - 0.786, CCC - 0.506
-AU7 intensity, Corr - 0.831, RMS - 0.757, CCC - 0.804
+AU7 intensity, Corr - 0.830, RMS - 0.750, CCC - 0.811
-AU9 intensity, Corr - 0.779, RMS - 0.551, CCC - 0.738
+AU9 intensity, Corr - 0.763, RMS - 0.611, CCC - 0.701
-AU10 intensity, Corr - 0.495, RMS - 0.719, CCC - 0.475
+AU10 intensity, Corr - 0.491, RMS - 0.759, CCC - 0.461
-AU12 intensity, Corr - 0.810, RMS - 0.714, CCC - 0.753
+AU12 intensity, Corr - 0.804, RMS - 0.715, CCC - 0.766
-AU14 intensity, Corr - 0.348, RMS - 0.896, CCC - 0.280
+AU14 intensity, Corr - 0.357, RMS - 0.931, CCC - 0.277
-AU15 intensity, Corr - 0.527, RMS - 0.538, CCC - 0.448
+AU15 intensity, Corr - 0.516, RMS - 0.565, CCC - 0.431
-AU17 intensity, Corr - 0.561, RMS - 0.882, CCC - 0.484
+AU17 intensity, Corr - 0.554, RMS - 0.893, CCC - 0.477
-AU20 intensity, Corr - 0.413, RMS - 0.880, CCC - 0.285
+AU20 intensity, Corr - 0.411, RMS - 0.901, CCC - 0.277
-AU23 intensity, Corr - 0.354, RMS - 0.753, CCC - 0.268
+AU23 intensity, Corr - 0.351, RMS - 0.736, CCC - 0.274
-AU25 intensity, Corr - 0.847, RMS - 0.818, CCC - 0.811
+AU25 intensity, Corr - 0.846, RMS - 0.809, CCC - 0.822
-AU26 intensity, Corr - 0.514, RMS - 0.955, CCC - 0.465
+AU26 intensity, Corr - 0.516, RMS - 0.995, CCC - 0.453
-AU45 intensity, Corr - 0.868, RMS - 0.550, CCC - 0.848
+AU45 intensity, Corr - 0.840, RMS - 0.662, CCC - 0.791

matlab_runners/Action Unit Experiments/results/DISFA_valid_res.txt

@@ -9,4 +9,4 @@ AU15 results - corr 0.745, rms 0.269, ccc - 0.712
 AU17 results - corr 0.642, rms 0.517, ccc - 0.574
 AU20 results - corr 0.619, rms 0.311, ccc - 0.581
 AU25 results - corr 0.926, rms 0.500, ccc - 0.920
-AU26 results - corr 0.803, rms 0.449, ccc - 0.762
+AU26 results - corr 0.802, rms 0.449, ccc - 0.762

matlab_runners/Action Unit Experiments/run_AU_prediction_BP4D.m

@@ -4,12 +4,12 @@ find_BP4D;
 BP4D_dir = [BP4D_dir, '../BP4D-training/'];
 out_loc = './out_bp4d/';
 
-if(~exist(out_loc, 'dir'))
-    mkdir(out_loc);
-end
-
 %%
-executable = '"../../x64/Release/FeatureExtraction.exe"';
+if(isunix)
+    executable = '"../../build/bin/FeatureExtraction"';
+else
+    executable = '"../../x64/Release/FeatureExtraction.exe"';
+end
 
 bp4d_dirs = {'F002', 'F004', 'F006', 'F008', 'F010', 'F012', 'F014', 'F016', 'F018', 'F020', 'F022', 'M002', 'M004', 'M006', 'M008', 'M010', 'M012', 'M014', 'M016', 'M018'};
 
@@ -23,7 +23,7 @@ new_bp4d_dirs = {};
 for i = 1:numel(bp4d_dirs)
     dirs = dir([BP4D_dir, '/', bp4d_dirs{i}, '/T*']);
 
-    tmp_dir = [BP4D_dir, '/../tmp/', bp4d_dirs{i}, '/'];
+    tmp_dir = [BP4D_dir, '/../tmp/', bp4d_dirs{i}];
     new_bp4d_dirs = cat(1, new_bp4d_dirs, tmp_dir);
 
     if(~exist(tmp_dir, 'file'))
@@ -51,18 +51,15 @@ for i = 1:numel(bp4d_dirs)
 end
 %%
 
-parfor f1=1:numel(new_bp4d_dirs)
+for f1=1:numel(new_bp4d_dirs)
     
-    command = [executable ' -asvid -no2Dfp -no3Dfp -noMparams -noPose -noGaze '];
+    command = sprintf('%s -aus -fdir "%s" -out_dir "%s"', executable, new_bp4d_dirs{f1}, out_loc);
-
-    [f,~,~] = fileparts(new_bp4d_dirs{f1});
-    [~,f,~] = fileparts(f);
-    output_file = [out_loc f '.au.txt'];
-
-    command = cat(2, command, [' -fdir "' new_bp4d_dirs{f1} '" -of "' output_file '"']);
 
+    if(isunix)
+        unix(command, '-echo')
+    else
         dos(command);
-
+    end
 end
 
 %%
@@ -76,7 +73,7 @@ aus_BP4D = [1, 2, 4, 6, 7, 10, 12, 14, 15, 17, 23];
 labels_gt = cat(1, labels_gt{:});
 
 %% Identifying which column IDs correspond to which AU
-tab = readtable([out_loc, bp4d_dirs{1}, '.au.txt']);
+tab = readtable([out_loc, bp4d_dirs{1}, '.csv']);
 column_names = tab.Properties.VariableNames;
 
 % As there are both classes and intensities list and evaluate both of them
@@ -110,10 +107,9 @@ preds_all_class = [];
 
 for i=1:numel(new_bp4d_dirs)
    
-    [f,~,~] = fileparts(new_bp4d_dirs{i});
+    [~,f,~] = fileparts(new_bp4d_dirs{i});
-    [~,f,~] = fileparts(f);
     
-    fname = [out_loc, f, '.au.txt'];
+    fname = [out_loc, f, '.csv'];
     preds = dlmread(fname, ',', 1, 0);
     
     
@@ -157,7 +153,7 @@ valid_ids = cat(1, valid_ids{:});
 labels_gt = cat(1, labels_gt{:});
 
 %% Identifying which column IDs correspond to which AU
-tab = readtable([out_loc, bp4d_dirs{1}, '.au.txt']);
+tab = readtable([out_loc, bp4d_dirs{1}, '.csv']);
 column_names = tab.Properties.VariableNames;
 
 % As there are both classes and intensities list and evaluate both of them
@@ -184,10 +180,9 @@ preds_all_int = [];
 
 for i=1:numel(new_bp4d_dirs)
    
-    [f,~,~] = fileparts(new_bp4d_dirs{i});
+    [~,f,~] = fileparts(new_bp4d_dirs{i});
-    [~,f,~] = fileparts(f);
         
-    fname = [out_loc, f, '.au.txt'];
+    fname = [out_loc, f, '.csv'];
     preds = dlmread(fname, ',', 1, 0);
     
     % Read all of the intensity AUs

matlab_runners/Action Unit Experiments/run_AU_prediction_Bosphorus.m

@@ -7,12 +7,12 @@ addpath('./helpers');
 find_Bosphorus;
 out_loc = './out_bosph/';
 
-if(~exist(out_loc, 'dir'))
-    mkdir(out_loc);
-end
-
 %%
-executable = '"../../x64/Release/FaceLandmarkImg.exe"';
+if(isunix)
+    executable = '"../../build/bin/FaceLandmarkImg"';
+else
+    executable = '"../../x64/Release/FaceLandmarkImg.exe"';
+end
 
 bosph_dirs = dir([Bosphorus_dir, '/BosphorusDB/BosphorusDB/bs*']);
 
@@ -22,11 +22,14 @@ parfor f1=1:numel(bosph_dirs)
     command = executable;
 
     input_dir = [Bosphorus_dir, '/BosphorusDB/BosphorusDB/', bosph_dirs(f1).name];
-    command = cat(2, command, [' -fdir "' input_dir '" -ofdir "' out_loc '"']);
+    command = cat(2, command, [' -fdir "' input_dir '" -out_dir "' out_loc '"']);
-    command = cat(2, command, ' -multi_view 1 -wild -q');
+    command = cat(2, command, ' -multi_view 1 -wild -aus ');
 
+    if(isunix)
+        unix(command, '-echo')
+    else
         dos(command);
-
+    end
 end
 
 %%
@@ -37,64 +40,32 @@ aus_Bosph = [1, 2, 4, 5, 6, 7, 9, 10, 12, 14, 15, 17, 20, 23, 25, 26, 45];
 
 %% Read the predicted values
 
-% First read the first file to get the ids and line numbers
+% First read the first file to get the column ids
-% au occurences
+tab = readtable([out_loc, filenames{1}, '.csv']);
-fid = fopen([out_loc, filenames{1}, '_det_0.pts']);
+column_names = tab.Properties.VariableNames;
-data = fgetl(fid);
+aus_det_id = cellfun(@(x) ~isempty(x) && x==5, strfind(column_names, '_c'));
-
+aus_det_cell = column_names(aus_det_id);
-ind = 0;
+aus_det = zeros(size(aus_det_cell));
-beg_ind = -1;
+for i=1:numel(aus_det)
-end_ind = -1;
+    aus_det(i) = str2num(aus_det_cell{i}(3:4));
-aus_det = [];
-aus_det_id = [];
-
-%%
-while ischar(data)
-    if(~isempty(findstr(data, 'au occurences:')))
-        num_occurences = str2num(data(numel('au occurences:')+1:end));
-        % Skip ahead two lines
-        data = fgetl(fid);   
-        data = fgetl(fid);   
-        ind = ind + 2;
-        beg_ind = ind;
-    end
-    
-    if(beg_ind ~= -1 && end_ind == -1)
-        if(~isempty(findstr(data, '}')))
-            end_ind = ind;
-        else
-            d = strsplit(data, ' '); 
-            aus_det = cat(1, aus_det, str2num(d{1}(3:end)));
-            aus_det_id = cat(1, aus_det_id, ind - beg_ind + 1);
-        end
-    end
-    
-    data = fgetl(fid);
-    ind = ind + 1;
 end
-fclose(fid);
 
 %%
 labels_pred = zeros(size(labels_gt));
 for i=1:numel(filenames)
 
     % Will need to read the relevant AUs only
-    if(exist([out_loc, filenames{i}, '_det_0.pts'], 'file'))
+    all_params  = dlmread([out_loc, filenames{i}, '.csv'], ',', 1, 0);
-        fid = fopen([out_loc, filenames{i}, '_det_0.pts']);
-        for k=1:beg_ind
-            data = fgetl(fid);
-        end
     
-        for k=1:num_occurences
+    % if multiple faces detected just take the first row
-            data = fgetl(fid);
+    aus_pred = all_params(1, aus_det_id);
+    
+    for k=1:numel(aus_det)
         if(sum(aus_Bosph == aus_det(k))>0)
-                d = strsplit(data, ' '); 
+            labels_pred(i, aus_Bosph == aus_det(k)) = aus_pred(k);
-                labels_pred(i, aus_Bosph == aus_det(k)) = str2num(d{2});
         end
     end
 
-        fclose(fid);
-    end
 end
 
 %%
@@ -122,63 +93,32 @@ fclose(f);
 
 %% Read the predicted values for intensities
 
-% First read the first file to get the ids and line numbers
+% First read the first file to get the column ids
-% au occurences
+tab = readtable([out_loc, filenames{1}, '.csv']);
-fid = fopen([out_loc, filenames{1}, '_det_0.pts']);
+column_names = tab.Properties.VariableNames;
-data = fgetl(fid);
+aus_det_id = cellfun(@(x) ~isempty(x) && x==5, strfind(column_names, '_r'));
-
+aus_det_cell = column_names(aus_det_id);
-ind = 0;
+aus_det = zeros(size(aus_det_cell));
-beg_ind = -1;
+for i=1:numel(aus_det)
-end_ind = -1;
+    aus_det(i) = str2num(aus_det_cell{i}(3:4));
-aus_det = [];
-aus_det_id = [];
-
-while ischar(data)
-    if(~isempty(findstr(data, 'au intensities:')))
-        num_occurences = str2num(data(numel('au intensities:')+1:end));
-        % Skip ahead two lines
-        data = fgetl(fid);   
-        data = fgetl(fid);   
-        ind = ind + 2;
-        beg_ind = ind;
-    end
-    
-    if(beg_ind ~= -1 && end_ind == -1)
-        if(~isempty(findstr(data, '}')))
-            end_ind = ind;
-        else
-            d = strsplit(data, ' '); 
-            aus_det = cat(1, aus_det, str2num(d{1}(3:end)));
-            aus_det_id = cat(1, aus_det_id, ind - beg_ind + 1);
-        end
-    end
-    
-    data = fgetl(fid);
-    ind = ind + 1;
 end
-fclose(fid);
 
 %%
 labels_pred = zeros(size(labels_gt));
 for i=1:numel(filenames)
 
     % Will need to read the relevant AUs only
-    if(exist([out_loc, filenames{i}, '_det_0.pts'], 'file'))
+    all_params  = dlmread([out_loc, filenames{i}, '.csv'], ',', 1, 0);
-        fid = fopen([out_loc, filenames{i}, '_det_0.pts']);
-        for k=1:beg_ind
-            data = fgetl(fid);
-        end
     
-        for k=1:num_occurences
+    % if multiple faces detected just take the first row
-            data = fgetl(fid);
+    aus_pred = all_params(1, aus_det_id);
+    
+    for k=1:numel(aus_det)
         if(sum(aus_Bosph == aus_det(k))>0)
-                d = strsplit(data, ' '); 
+            labels_pred(i, aus_Bosph == aus_det(k)) = aus_pred(k);
-                labels_pred(i, aus_Bosph == aus_det(k)) = str2num(d{2});
         end
     end
 
-        fclose(fid);
-    end
 end
 
 %%

matlab_runners/Action Unit Experiments/run_AU_prediction_DISFA.m

@@ -10,17 +10,18 @@ if(exist('D:/Datasets/DISFA/Videos_LeftCamera/', 'file'))
     DISFA_dir = 'D:/Datasets/DISFA/Videos_LeftCamera/';  
 elseif(exist('E:/Datasets/DISFA/Videos_LeftCamera/', 'file'))   
     DISFA_dir = 'E:/Datasets/DISFA/Videos_LeftCamera/';  
-else
+elseif(exist('/multicomp/datasets/face_datasets/DISFA/Videos_LeftCamera/', 'file'))
     DISFA_dir = '/multicomp/datasets/face_datasets/DISFA/Videos_LeftCamera/';
+elseif(exist('/media/tadas/2EBEA130BEA0F20F/datasets/DISFA/', 'file'))
+    DISFA_dir = '/media/tadas/2EBEA130BEA0F20F/datasets/DISFA/Videos_LeftCamera/';
+else
+    fprintf('Cannot find DIFA location\n');
 end
 
 
 videos = dir([DISFA_dir, '*.avi']);
 
 output = 'out_DISFA/';
-if(~exist(output, 'file'))
-    mkdir(output);
-end
 
 %%
 % Do it in parrallel for speed (replace the parfor with for if no parallel
@@ -29,11 +30,7 @@ parfor v = 1:numel(videos)
    
     vid_file = [DISFA_dir, videos(v).name];
     
-    [~, name, ~] = fileparts(vid_file);
+    command = sprintf('%s -f "%s" -out_dir "%s" -aus ', executable, vid_file, output);
-    
-    % where to output tracking results
-    output_file = [output name '_au.txt'];
-    command = [executable ' -f "' vid_file '" -of "' output_file '" -q -no2Dfp -no3Dfp -noMparams -noPose -noGaze'];
         
     if(isunix)
         unix(command, '-echo');
@@ -70,30 +67,32 @@ for i=1:numel(label_folders)
     label_ids = cat(1, label_ids, repmat(user_id, size(labels,1),1));
 end
 
-preds_files = dir([prediction_dir, '*SN*.txt']);
+preds_files = dir([prediction_dir, '*SN*.csv']);
 
 tab = readtable([prediction_dir, preds_files(1).name]);
 column_names = tab.Properties.VariableNames;
 aus_pred_int = [];
-for c=3:numel(column_names)
+au_inds_in_file = [];
+for c=1:numel(column_names)
     if(strfind(column_names{c}, '_r') > 0)
         aus_pred_int = cat(1, aus_pred_int, int32(str2num(column_names{c}(3:end-2))));
+        au_inds_in_file = cat(1, au_inds_in_file, c);
     end
 end
     
 inds_au = zeros(numel(AUs_disfa),1);
 
 for ind=1:numel(AUs_disfa)  
-    inds_au(ind) = find(aus_pred_int==AUs_disfa(ind));
+    inds_au(ind) = au_inds_in_file(aus_pred_int==AUs_disfa(ind));
 end
 preds_all = zeros(size(labels_all,1), numel(AUs_disfa));
 
 for i=1:numel(preds_files)
    
     preds = dlmread([prediction_dir, preds_files(i).name], ',', 1, 0);
-    preds = preds(:,5:5+numel(aus_pred_int)-1);
+    %preds = preds(:,5:5+numel(aus_pred_int)-1);
 
-    user_id = str2num(preds_files(i).name(end - 14:end-12));
+    user_id = str2num(preds_files(i).name(end - 11:end-9));
     rel_ids = label_ids == user_id;
     preds_all(rel_ids,:) = preds(:,inds_au);
 end

matlab_runners/Action Unit Experiments/run_AU_prediction_FERA2011.m

@@ -5,10 +5,6 @@ find_FERA2011;
 
 out_loc = './out_fera/';
 
-if(~exist(out_loc, 'dir'))
-    mkdir(out_loc);
-end
-
 %%
 if(isunix)
     executable = '"../../build/bin/FeatureExtraction"';
@@ -18,20 +14,17 @@ end
 
 fera_dirs = dir([FERA2011_dir, 'train*']);
 
-parfor f1=1:numel(fera_dirs)
+for f1=1:numel(fera_dirs)
 
     vid_files = dir([FERA2011_dir, fera_dirs(f1).name, '/*.avi']);
 
     for v=1:numel(vid_files)
 
-        command = [executable ' -asvid -q -no2Dfp -no3Dfp -noMparams -noPose -noGaze -au_static '];
+        command = [executable ' -aus -au_static '];
 
         curr_vid = [FERA2011_dir, fera_dirs(f1).name, '/', vid_files(v).name];
 
-        [~,name,~] = fileparts(curr_vid);
+        command = cat(2, command, [' -f "' curr_vid '" -out_dir "' out_loc '"']);
-        output_file = [out_loc name '.au.txt'];
-
-        command = cat(2, command, [' -f "' curr_vid '" -of "' output_file '"']);
 
         if(isunix)
             unix(command, '-echo');
@@ -50,7 +43,7 @@ for i=1:numel(filenames)
 end
 
 %% Identifying which column IDs correspond to which AU
-tab = readtable([out_loc, 'train_001.au.txt']);
+tab = readtable([out_loc, 'train_001.csv']);
 column_names = tab.Properties.VariableNames;
 
 % As there are both classes and intensities list and evaluate both of them
@@ -79,7 +72,7 @@ preds_all_class = [];
 
 for i=1:numel(filenames)
    
-    fname = dir([out_loc, '/*', filenames{i}, '.au.txt']);
+    fname = dir([out_loc, '/*', filenames{i}, '.csv']);
     fname = fname(1).name;
     
     preds = dlmread([out_loc '/' fname], ',', 1, 0);

matlab_runners/Action Unit Experiments/run_AU_prediction_SEMAINE.m

@@ -5,10 +5,6 @@ find_SEMAINE;
 
 out_loc = './out_SEMAINE/';
 
-if(~exist(out_loc, 'dir'))
-    mkdir(out_loc);
-end
-
 if(isunix)
     executable = '"../../build/bin/FeatureExtraction"';
 else
@@ -24,14 +20,9 @@ parfor f1=1:numel(devel_recs)
 
         f1_dir = devel_recs{f1};
 
-        command = [executable, ' -fx 800 -fy 800 -q -no2Dfp -no3Dfp -noMparams -noPose -noGaze '];
-
         curr_vid = [SEMAINE_dir, f1_dir, '/', vid_file.name];
 
-        name = f1_dir;
+        command = sprintf('%s -aus -f "%s" -out_dir "%s" ', executable, curr_vid, out_loc);
-        output_aus = [out_loc name '.au.txt'];
-
-        command = cat(2, command, [' -f "' curr_vid '" -of "' output_aus, '"']);
         
         if(isunix)
             unix(command, '-echo');
@@ -43,26 +34,19 @@ parfor f1=1:numel(devel_recs)
 end
 
 %% Actual model evaluation
-[ labels, valid_ids, vid_ids  ] = extract_SEMAINE_labels(SEMAINE_dir, devel_recs, aus_SEMAINE);
+[ labels, valid_ids, vid_ids, vid_names ] = extract_SEMAINE_labels(SEMAINE_dir, devel_recs, aus_SEMAINE);
 
 labels_gt = cat(1, labels{:});
 
 %% Identifying which column IDs correspond to which AU
-tab = readtable([out_loc, devel_recs{1}, '.au.txt']);
+tab = readtable([out_loc, vid_names{1}, '.csv']);
 column_names = tab.Properties.VariableNames;
 
 % As there are both classes and intensities list and evaluate both of them
-aus_pred_int = [];
 aus_pred_class = [];
-
-inds_int_in_file = [];
 inds_class_in_file = [];
 
 for c=1:numel(column_names)
-    if(strfind(column_names{c}, '_r') > 0)
-        aus_pred_int = cat(1, aus_pred_int, int32(str2num(column_names{c}(3:end-2))));
-        inds_int_in_file = cat(1, inds_int_in_file, c);
-    end
     if(strfind(column_names{c}, '_c') > 0)
         aus_pred_class = cat(1, aus_pred_class, int32(str2num(column_names{c}(3:end-2))));
         inds_class_in_file = cat(1, inds_class_in_file, c);
@@ -70,37 +54,20 @@ for c=1:numel(column_names)
 end
 
 %%
-inds_au_int = zeros(size(aus_SEMAINE));
 inds_au_class = zeros(size(aus_SEMAINE));
 
-for ind=1:numel(aus_SEMAINE)  
-    if(~isempty(find(aus_pred_int==aus_SEMAINE(ind), 1)))
-        inds_au_int(ind) = find(aus_pred_int==aus_SEMAINE(ind));
-    end
-end
-
 for ind=1:numel(aus_SEMAINE)  
     if(~isempty(find(aus_pred_class==aus_SEMAINE(ind), 1)))
-        inds_au_class(ind) = find(aus_pred_class==aus_SEMAINE(ind));
+        inds_au_class(ind) = inds_class_in_file(aus_pred_class==aus_SEMAINE(ind));
     end
 end
 
-preds_all_class = [];
+preds_all = [];
-preds_all_int = [];
+for i=1:numel(vid_names)
    
-for i=1:numel(devel_recs)
+    fname = [out_loc, vid_names{i}, '.csv'];
-   
-    fname = [out_loc, devel_recs{i}, '.au.txt'];
     preds = dlmread(fname, ',', 1, 0);
-    
+    preds_all = cat(1, preds_all, preds(vid_ids(i,1):vid_ids(i,2) - 1, :));
-    % Read all of the intensity AUs
-    preds_int = preds(vid_ids(i,1):vid_ids(i,2) - 1, inds_int_in_file);
-    
-    % Read all of the classification AUs
-    preds_class = preds(vid_ids(i,1):vid_ids(i,2) - 1, inds_class_in_file);
-    
-    preds_all_class = cat(1, preds_all_class, preds_class);
-    preds_all_int = cat(1, preds_all_int, preds_int);
 end
 
 %%
@@ -109,10 +76,10 @@ f1s = zeros(1, numel(aus_SEMAINE));
 for au = 1:numel(aus_SEMAINE)
     
     if(inds_au_class(au) ~= 0)
-        tp = sum(labels_gt(:,au) == 1 & preds_all_class(:, inds_au_class(au)) == 1);
+        tp = sum(labels_gt(:,au) == 1 & preds_all(:, inds_au_class(au)) == 1);
-        fp = sum(labels_gt(:,au) == 0 & preds_all_class(:, inds_au_class(au)) == 1);
+        fp = sum(labels_gt(:,au) == 0 & preds_all(:, inds_au_class(au)) == 1);
-        fn = sum(labels_gt(:,au) == 1 & preds_all_class(:, inds_au_class(au)) == 0);
+        fn = sum(labels_gt(:,au) == 1 & preds_all(:, inds_au_class(au)) == 0);
-        tn = sum(labels_gt(:,au) == 0 & preds_all_class(:, inds_au_class(au)) == 0);
+        tn = sum(labels_gt(:,au) == 0 & preds_all(:, inds_au_class(au)) == 0);
 
         precision = tp./(tp+fp);
         recall = tp./(tp+fn);

matlab_runners/Demos/feature_extraction_demo_img_seq.m

@@ -1,43 +1,24 @@
+% A demo script that demonstrates how to process a single video file using
+% OpenFace and extract and visualize all of the features
+
 clear
 
+% The location executable will depend on the OS
 if(isunix)
     executable = '"../../build/bin/FeatureExtraction"';
 else
     executable = '"../../x64/Release/FeatureExtraction.exe"';
 end
 
-output = './output_features_seq/';
+% Input file
+in_dir = '../../samples/image_sequence';
 
-if(~exist(output, 'file'))
+% Where to store the output
-    mkdir(output)
+output_dir = './processed_features/';
-end
 
-in_dirs = {'../../image_sequence'};
+% This will take directory after -fdir and output all the features to directory
-% some parameters
+% after -out_dir
-verbose = true;
+command = sprintf('%s -fdir "%s" -out_dir "%s" -verbose', executable, in_dir, output_dir);
-
-command = executable;
-
-% Remove for a speedup
-command = cat(2, command, ' -verbose ');
-
-% add all videos to single argument list (so as not to load the model anew
-% for every video)
-for i=1:numel(in_dirs)
-    
-    [~, name, ~] = fileparts(in_dirs{i});
-    
-    % where to output tracking results
-    outputFile = [output name '.txt'];
-    outputDir_aligned = [output name];
-            
-    outputHOG_aligned = [output name '.hog'];
-    
-    command = cat(2, command, ['-asvid -fdir "' in_dirs{i} '" -of "' outputFile '" ']);
-        
-    command = cat(2, command, [' -simalign "' outputDir_aligned '" -simsize 200 -hogalign "' outputHOG_aligned '"']);    
-                 
-end
                  
 if(isunix)
     unix(command);
@@ -47,15 +28,30 @@ end
 
 %% Demonstrating reading the output files
 
-% First read in the column names
+% Most of the features will be in the csv file in the output directory with
-tab = readtable(outputFile);
+% the same name as the input file
+[~,name,~] = fileparts(in_dir);
+output_csv = sprintf('%s/%s.csv', output_dir, name);
+
+% First read in the column names, to know which columns to read for
+% particular features
+tab = readtable(output_csv);
 column_names = tab.Properties.VariableNames;
 
-all_params  = dlmread(outputFile, ',', 1, 0);
+% Read all of the data
+all_params  = dlmread(output_csv, ',', 1, 0);
 
 % This indicates which frames were succesfully tracked
-valid_frames = logical(all_params(:,4));
+
-time = all_params(valid_frames, 2);
+% Find which column contains success of tracking data and timestamp data
+valid_ind = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'success'));
+frame_ind = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'frame'));
+
+% Extract tracking success data and only read those frame
+valid_frames = logical(all_params(:,valid_ind));
+
+% Get the timestamp data
+frame_nums = all_params(valid_frames, frame_ind);
 
 %% Finding which header line starts with p_ (basically model params)
 shape_inds = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'p_'));
@@ -64,9 +60,9 @@ shape_inds = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'p_'));
 shape_params  = all_params(valid_frames, shape_inds);
 
 figure
-plot(time, shape_params);
+plot(frame_nums, shape_params);
 title('Shape parameters');
-xlabel('Time (s)');
+xlabel('Frame');
 
 %% Demonstrate 2D landmarks
 landmark_inds_x = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'x_'));
@@ -75,10 +71,20 @@ landmark_inds_y = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'y_'))
 xs = all_params(valid_frames, landmark_inds_x);
 ys = all_params(valid_frames, landmark_inds_y);
 
+eye_landmark_inds_x = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_x_'));
+eye_landmark_inds_y = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_y_'));
+
+eye_xs = all_params(valid_frames, eye_landmark_inds_x);
+eye_ys = all_params(valid_frames, eye_landmark_inds_y);
+
 figure
 
 for j = 1:size(xs,1)
     plot(xs(j,:), -ys(j,:), '.');
+    hold on;
+    plot(eye_xs(j,:), -eye_ys(j,:), '.r');
+    hold off;
+    
     xlim([min(xs(1,:)) * 0.5, max(xs(2,:))*1.4]);
     ylim([min(-ys(1,:)) * 1.4, max(-ys(2,:))*0.5]);
     xlabel('x (px)');
@@ -96,9 +102,20 @@ xs = all_params(valid_frames, landmark_inds_x);
 ys = all_params(valid_frames, landmark_inds_y);
 zs = all_params(valid_frames, landmark_inds_z);
 
+eye_landmark_inds_x = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_X_'));
+eye_landmark_inds_y = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_Y_'));
+eye_landmark_inds_z = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_Z_'));
+
+eye_xs = all_params(valid_frames, eye_landmark_inds_x);
+eye_ys = all_params(valid_frames, eye_landmark_inds_y);
+eye_zs = all_params(valid_frames, eye_landmark_inds_z);
+
 figure
 for j = 1:size(xs,1)
     plot3(xs(j,:), ys(j,:), zs(j,:), '.');axis equal;
+    hold on;
+    plot3(eye_xs(j,:), eye_ys(j,:), eye_zs(j,:), '.r');
+    hold off;
     xlabel('X (mm)');
     ylabel('Y (mm)');    
     zlabel('Z (mm)');    
@@ -110,7 +127,7 @@ au_reg_inds = cellfun(@(x) ~isempty(x) && x==5, strfind(column_names, '_r'));
 
 aus = all_params(valid_frames, au_reg_inds);
 figure
-plot(aus);
+plot(frame_nums, aus);
 title('Facial Action Units (intensity)');
 xlabel('Time (s)');
 ylabel('Intensity');
@@ -120,7 +137,7 @@ au_class_inds = cellfun(@(x) ~isempty(x) && x==5, strfind(column_names, '_c'));
 
 aus = all_params(valid_frames, au_class_inds);
 figure
-plot(aus);
+plot(frame_nums, aus);
 title('Facial Action Units (presense)');
 xlabel('Time (s)');
 ylim([0,2]);
@@ -129,18 +146,34 @@ pose_inds = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'pose_'));
 
 pose = all_params(valid_frames, pose_inds);
 figure
-plot(pose);
+plot(frame_nums, pose);
 title('Pose (rotation and translation)');
-xlabel('Time (s)');
+xlabel('Frame number');
+
+%% Demo gaze
+gaze_inds = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'gaze_angle'));
+
+% Read gaze (x,y,z) for one eye and (x,y,z) for another
+gaze = all_params(valid_frames, gaze_inds);
+
+plot(frame_nums, gaze(:,1), 'DisplayName', 'Left - right');
+hold on;
+plot(frame_nums, gaze(:,2), 'DisplayName', 'Up - down');
+xlabel('Frame number') % x-axis label
+ylabel('Angle radians') % y-axis label
+legend('show');
+hold off;
 
 %% Output HOG files
-[hog_data, valid_inds] = Read_HOG_file(outputHOG_aligned);
+output_hog_file = sprintf('%s/%s.hog', output_dir, name);
+[hog_data, valid_inds] = Read_HOG_file(output_hog_file);
 
 %% Output aligned images
-img_files = dir([outputDir_aligned, '/*.png']);
+output_aligned_dir = sprintf('%s/%s_aligned/', output_dir, name);
+img_files = dir([output_aligned_dir, '/*.bmp']);
 imgs = cell(numel(img_files, 1));
 for i=1:numel(img_files)
-   imgs{i} = imread([ outputDir_aligned, '/', img_files(i).name]);
+   imgs{i} = imread([ output_aligned_dir, '/', img_files(i).name]);
    imshow(imgs{i})
    drawnow
 end

matlab_runners/Demos/feature_extraction_demo_vid.m

@@ -1,48 +1,24 @@
+% A demo script that demonstrates how to process a single video file using
+% OpenFace and extract and visualize all of the features
+
 clear
 
+% The location executable will depend on the OS
 if(isunix)
     executable = '"../../build/bin/FeatureExtraction"';
 else
     executable = '"../../x64/Release/FeatureExtraction.exe"';
 end
 
-output = './output_features_vid/';
+% Input file
+in_file = '../../samples/default.wmv';
 
-if(~exist(output, 'file'))
+% Where to store the output
-    mkdir(output)
+output_dir = './processed_features/';
-end
 
-in_files = dir('../../samples/default.wmv');
+% This will take file after -f and output all the features to directory
-% some parameters
+% after -out_dir
-verbose = true;
+command = sprintf('%s -f "%s" -out_dir "%s" -verbose', executable, in_file, output_dir);
-
-command = executable;
-
-% Remove for a speedup
-command = cat(2, command, ' -verbose ');
-
-% add all videos to single argument list (so as not to load the model anew
-% for every video)
-for i=1:numel(in_files)
-    
-    inputFile = ['../../samples/', in_files(i).name];
-    [~, name, ~] = fileparts(inputFile);
-    
-    % where to output tracking results
-    outputFile = [output name '.csv'];
-            
-    if(~exist([output name], 'file'))
-        mkdir([output name]);
-    end
-    
-    outputDir_aligned = [output name];
-    
-    outputHOG_aligned = [output name '.hog'];
-        
-    command = cat(2, command, [' -f "' inputFile '" -of "' outputFile '"']);        
-    command = cat(2, command, [' -au_static -simsize 224 -simalign "' outputDir_aligned '" -hogalign "' outputHOG_aligned '"' ]);    
-                 
-end
                  
 if(isunix)
     unix(command);
@@ -52,15 +28,30 @@ end
 
 %% Demonstrating reading the output files
 
-% First read in the column names
+% Most of the features will be in the csv file in the output directory with
-tab = readtable(outputFile);
+% the same name as the input file
+[~,name,~] = fileparts(in_file);
+output_csv = sprintf('%s/%s.csv', output_dir, name);
+
+% First read in the column names, to know which columns to read for
+% particular features
+tab = readtable(output_csv);
 column_names = tab.Properties.VariableNames;
 
-all_params  = dlmread(outputFile, ',', 1, 0);
+% Read all of the data
+all_params  = dlmread(output_csv, ',', 1, 0);
 
 % This indicates which frames were succesfully tracked
-valid_frames = logical(all_params(:,4));
+
-time = all_params(valid_frames, 2);
+% Find which column contains success of tracking data and timestamp data
+valid_ind = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'success'));
+time_stamp_ind = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'timestamp'));
+
+% Extract tracking success data and only read those frame
+valid_frames = logical(all_params(:,valid_ind));
+
+% Get the timestamp data
+time_stamps = all_params(valid_frames, time_stamp_ind);
 
 %% Finding which header line starts with p_ (basically model params)
 shape_inds = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'p_'));
@@ -69,7 +60,7 @@ shape_inds = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'p_'));
 shape_params  = all_params(valid_frames, shape_inds);
 
 figure
-plot(time, shape_params);
+plot(time_stamps, shape_params);
 title('Shape parameters');
 xlabel('Time (s)');
 
@@ -77,21 +68,21 @@ xlabel('Time (s)');
 landmark_inds_x = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'x_'));
 landmark_inds_y = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'y_'));
 
-landmark_inds_x_eye = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_x_'));
-landmark_inds_y_eye = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_y_'));
-
 xs = all_params(valid_frames, landmark_inds_x);
 ys = all_params(valid_frames, landmark_inds_y);
 
-xs_eye = all_params(valid_frames, landmark_inds_x_eye);
+eye_landmark_inds_x = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_x_'));
-ys_eye = all_params(valid_frames, landmark_inds_y_eye);
+eye_landmark_inds_y = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_y_'));
+
+eye_xs = all_params(valid_frames, eye_landmark_inds_x);
+eye_ys = all_params(valid_frames, eye_landmark_inds_y);
 
 figure
 
 for j = 1:size(xs,1)
     plot(xs(j,:), -ys(j,:), '.');
     hold on;
-    plot(xs_eye(j,:), -ys_eye(j,:), '.');
+    plot(eye_xs(j,:), -eye_ys(j,:), '.r');
     hold off;
     
     xlim([min(xs(1,:)) * 0.5, max(xs(2,:))*1.4]);
@@ -111,9 +102,20 @@ xs = all_params(valid_frames, landmark_inds_x);
 ys = all_params(valid_frames, landmark_inds_y);
 zs = all_params(valid_frames, landmark_inds_z);
 
+eye_landmark_inds_x = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_X_'));
+eye_landmark_inds_y = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_Y_'));
+eye_landmark_inds_z = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'eye_lmk_Z_'));
+
+eye_xs = all_params(valid_frames, eye_landmark_inds_x);
+eye_ys = all_params(valid_frames, eye_landmark_inds_y);
+eye_zs = all_params(valid_frames, eye_landmark_inds_z);
+
 figure
 for j = 1:size(xs,1)
     plot3(xs(j,:), ys(j,:), zs(j,:), '.');axis equal;
+    hold on;
+    plot3(eye_xs(j,:), eye_ys(j,:), eye_zs(j,:), '.r');
+    hold off;
     xlabel('X (mm)');
     ylabel('Y (mm)');    
     zlabel('Z (mm)');    
@@ -125,7 +127,7 @@ au_reg_inds = cellfun(@(x) ~isempty(x) && x==5, strfind(column_names, '_r'));
 
 aus = all_params(valid_frames, au_reg_inds);
 figure
-plot(time, aus);
+plot(time_stamps, aus);
 title('Facial Action Units (intensity)');
 xlabel('Time (s)');
 ylabel('Intensity');
@@ -135,7 +137,7 @@ au_class_inds = cellfun(@(x) ~isempty(x) && x==5, strfind(column_names, '_c'));
 
 aus = all_params(valid_frames, au_class_inds);
 figure
-plot(time, aus);
+plot(time_stamps, aus);
 title('Facial Action Units (presense)');
 xlabel('Time (s)');
 ylim([0,2]);
@@ -144,7 +146,7 @@ pose_inds = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'pose_'));
 
 pose = all_params(valid_frames, pose_inds);
 figure
-plot(pose);
+plot(time_stamps, pose);
 title('Pose (rotation and translation)');
 xlabel('Time (s)');
 
@@ -154,22 +156,24 @@ gaze_inds = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'gaze_angle'
 % Read gaze (x,y,z) for one eye and (x,y,z) for another
 gaze = all_params(valid_frames, gaze_inds);
 
-plot(time, gaze(:,1), 'DisplayName', 'Left - right');
+plot(time_stamps, gaze(:,1), 'DisplayName', 'Left - right');
 hold on;
-plot(time, gaze(:,2), 'DisplayName', 'Up - down');
+plot(time_stamps, gaze(:,2), 'DisplayName', 'Up - down');
 xlabel('Time(s)') % x-axis label
 ylabel('Angle radians') % y-axis label
 legend('show');
 hold off;
 
 %% Output HOG files
-[hog_data, valid_inds] = Read_HOG_file(outputHOG_aligned);
+output_hog_file = sprintf('%s/%s.hog', output_dir, name);
+[hog_data, valid_inds] = Read_HOG_file(output_hog_file);
 
 %% Output aligned images
-img_files = dir([outputDir_aligned, '/*.bmp']);
+output_aligned_dir = sprintf('%s/%s_aligned/', output_dir, name);
+img_files = dir([output_aligned_dir, '/*.bmp']);
 imgs = cell(numel(img_files, 1));
 for i=1:numel(img_files)
-   imgs{i} = imread([ outputDir_aligned, '/', img_files(i).name]);
+   imgs{i} = imread([ output_aligned_dir, '/', img_files(i).name]);
    imshow(imgs{i})
    drawnow
 end

matlab_runners/Demos/gaze_extraction_demo_vid.m

@@ -6,36 +6,11 @@ else
     executable = '"../../x64/Release/FeatureExtraction.exe"';
 end
 
-output = './output_features_vid/';
+output = './processed_features/';
     
-if(~exist(output, 'file'))
+in_file = '../../samples/2015-10-15-15-14.avi';
-    mkdir(output)
-end
 
-in_files = dir('../../samples/2015-10-15-15-14.avi');
+command = sprintf('%s -f "%s" -out_dir "%s" -gaze -verbose', executable, in_file, output);
-% some parameters
-verbose = true;
-
-command = executable;
-command = cat(2, command, ' -verbose  -no2Dfp -no3Dfp -noMparams -noPose -noAUs ');
-
-% add all videos to single argument list (so as not to load the model anew
-% for every video)
-for i=1:numel(in_files)
-    
-    inputFile = ['../../samples/', in_files(i).name];
-    [~, name, ~] = fileparts(inputFile);
-    
-    % where to output tracking results
-    outputFile_gaze = [output name '_gaze.txt'];
-    
-    if(~exist([output name], 'file'))
-        mkdir([output name]);
-    end
-    
-    command = cat(2, command, ['-fx 700 -fy 700 -f "' inputFile '" -of "' outputFile_gaze '"']);
-               
-end
     
 if(isunix)
     unix(command);
@@ -44,41 +19,23 @@ else
 end
 
 %% Demonstrating reading the output files
-filename = [output name];
+[~, out_filename,~] = fileparts(in_file);
+out_filename = sprintf("%s/%s.csv", output, out_filename);
 
-% Read gaze (x,y,z) for one eye and (x,y,z) for another
+% First read in the column names
-gaze  = dlmread([filename, '_gaze.txt'], ',', 1, 0);
+tab = readtable(out_filename);
+column_names = tab.Properties.VariableNames;
 
-% This indicates which frames were succesfully tracked
+all_params  = dlmread(out_filename, ',', 1, 0);
-valid_frames = gaze(:,4);
 
-% only picking left, right and up down views for visualisation
+gaze_angle_ids = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'gaze_angle_'));
 
-% These are gaze angles with respect to head pose
+gaze = all_params(:,gaze_angle_ids);
-gaze_angle = gaze(:,[11,12]);
 
-figure;
-plot(smooth(gaze_angle(:,1)), 'DisplayName', 'Left - right');
-hold on;
-plot(smooth(gaze_angle(:,2)), 'DisplayName', 'Up - down');
-xlabel('Frame') % x-axis label
-ylabel('Radians') % y-axis label
-legend('show');
-hold off;
-
-% These are gaze direction vectors
-gaze = gaze(:,[5,6,7,8,9,10]);
-
-gaze = (gaze(:,[1,2,3]) + gaze(:,[4,5,6]))/2;
-gaze(:,1) = smooth(gaze(:,1));
-gaze(:,2) = smooth(gaze(:,2));
-gaze(:,3) = smooth(gaze(:,3));
-
-figure;
 plot(gaze(:,1), 'DisplayName', 'Left - right');
 hold on;
 plot(gaze(:,2), 'DisplayName', 'Up - down');
 xlabel('Frame') % x-axis label
-ylabel('Gaze vector size') % y-axis label
+ylabel('Angle in radians') % y-axis label
 legend('show');
 hold off;

matlab_runners/Demos/run_demo_align_size.m

@@ -0,0 +1,47 @@
+% A demo script that demonstrates how to extract aligned faces from a sequence, 
+% also shows how to extract different sized aligned faces
+
+clear
+
+% The location executable will depend on the OS
+if(isunix)
+    executable = '"../../build/bin/FeatureExtraction"';
+else
+    executable = '"../../x64/Release/FeatureExtraction.exe"';
+end
+
+% Input file
+in_file = '../../samples/default.wmv';
+
+% Where to store the output
+output_dir = './processed_features/';
+
+img_sizes = [64, 112, 224];
+
+for s=1:numel(img_sizes)
+    % This will take file after -f and output all the features to directory
+    % after -out_dir, with name after -of
+    command = sprintf('%s -f "%s" -out_dir "%s" -simalign -simsize %d -of sample_%d', executable, in_file, output_dir, img_sizes(s), img_sizes(s) );
+
+    if(isunix)
+        unix(command);
+    else
+        dos(command);
+    end
+
+    %% Output aligned images
+    output_aligned_dir = sprintf('%s/sample_%d_aligned/', output_dir, img_sizes(s));
+    img_files = dir([output_aligned_dir, '/*.bmp']);
+    imgs = cell(numel(img_files), 1);
+    
+    assert(numel(imgs) > 0);
+
+    for i=1:numel(img_files)
+        imgs{i} = imread([ output_aligned_dir, '/', img_files(i).name]);
+    
+        assert(size(imgs{i},1) == img_sizes(s) && size(imgs{i},2) == img_sizes(s));
+        
+        imshow(imgs{i})
+        drawnow
+    end
+end

matlab_runners/Demos/run_demo_images.m

@@ -8,38 +8,22 @@ end
 in_dir  = '../../samples/';
 out_dir = './demo_img/';
 
-if(~exist(out_dir, 'file'))
+model = 'model/main_clnf_general.txt'; % Trained on in the wild and multi-pie data (a CLNF model)
-    mkdir(out_dir);
-end
 
-% some parameters
+% Uncomment the below models if you want to try them
-verbose = true;
+%model = 'model/main_clnf_wild.txt'; % Trained on in-the-wild data only
 
-% Trained on in the wild and multi-pie data (less accurate CLM model)
+%model = 'model/main_clm_general.txt'; % Trained on in the wild and multi-pie data (less accurate SVR/CLM model)
-% model = 'model/main_clm_general.txt';
+%model = 'model/main_clm_wild.txt'; % Trained on in-the-wild
-% Trained on in-the-wild
-%model = 'model/main_clm_wild.txt';
 
-% Trained on in the wild and multi-pie data (more accurate CLNF model)
+% Load images (-fdir), output images and all the features (-out_dir), use a
-model = 'model/main_clnf_general.txt';
+% user specified model (-mloc), and visualize everything (-verbose)
-% Trained on in-the-wild
+command = sprintf('%s -fdir "%s" -out_dir "%s" -verbose -mloc "%s" ', executable, in_dir, out_dir, model);
-%model = 'model/main_clnf_wild.txt';
-
-command = executable;
-
-command = cat(2, command, [' -fdir "' in_dir '"']);
-
-if(verbose)
-    command = cat(2, command, [' -ofdir "' out_dir '"']);
-    command = cat(2, command, [' -oidir "' out_dir '"']);
-end
-
-command = cat(2, command, [' -mloc "', model, '"']);
 
 % Demonstrates the multi-hypothesis slow landmark detection (more accurate
 % when dealing with non-frontal faces and less accurate face detections)
 % Comment to skip this functionality
-command = cat(2, command, ' -wild ');
+command = cat(2, command, ' -wild -multi_view 1');
 
 if(isunix)
     unix(command);

matlab_runners/Demos/run_demo_video_multi.m

@@ -1,3 +1,5 @@
+% A demo how to run a multi-face face tracker
+
 clear;
 
 if(isunix)
@@ -6,44 +8,27 @@ else
     executable = '"../../x64/Release/FaceLandmarkVidMulti.exe"';
 end
     
-output = './demo_vid/';
-
-if(~exist(output, 'file'))
-    mkdir(output)
-end
-    
 in_files = dir('../../samples/multi_face.avi');
-% some parameters
-verbose = true;
 
-% Trained on in the wild and multi-pie data (less accurate CLM model)
+model = 'model/main_clnf_general.txt'; % Trained on in the wild and multi-pie data (a CLNF model)
-%model = 'model/main_clm_general.txt';
-% Trained on in-the-wild
-%model = 'model/main_clm_wild.txt';
 
-% Trained on in the wild and multi-pie data (more accurate CLNF model)
+% Uncomment the below models if you want to try them
-model = 'model/main_clnf_general.txt';
+%model = 'model/main_clnf_wild.txt'; % Trained on in-the-wild data only
-% Trained on in-the-wild
+
-%model = 'model/main_clnf_wild.txt';
+%model = 'model/main_clm_general.txt'; % Trained on in the wild and multi-pie data (less accurate SVR/CLM model)
+%model = 'model/main_clm_wild.txt'; % Trained on in-the-wild
+
+% Create a command that will run the tracker on set of videos and display the output 
+command = sprintf('%s -mloc "%s" ', executable, model);
 
-command = executable;
-command = cat(2, command, [' -mloc "', model, '"']);
 % add all videos to single argument list (so as not to load the model anew
 % for every video)
 for i=1:numel(in_files)
-    
     inputFile = ['../../samples/', in_files(i).name];        
-    [~, name, ~] = fileparts(inputFile);
-    
     command = cat(2, command, [' -f "' inputFile '" ']);
-    
-    if(verbose)
-        outputVideo = ['"' output name '.avi' '"'];
-        command = cat(2, command, [' -ov ' outputVideo]);
-    end
-                 
 end
 
+% Call the executable
 if(isunix)
     unix(command);
 else

matlab_runners/Demos/run_demo_videos.m

@@ -1,3 +1,5 @@
+% A demo how to run a single-face face tracker
+
 clear
 
 if(isunix)
@@ -6,45 +8,28 @@ else
     executable = '"../../x64/Release/FaceLandmarkVid.exe"';
 end
     
-output = './demo_vid/';
-
-if(~exist(output, 'file'))
-    mkdir(output)
-end
-    
 in_files = dir('../../samples/*.wmv');
 in_files = cat(1, in_files, dir('../../samples/*.avi'));
-% some parameters
-verbose = true;
 
-% Trained on in the wild and multi-pie data (less accurate SVR/CLM model)
+model = 'model/main_clnf_general.txt'; % Trained on in the wild and multi-pie data (a CLNF model)
-%model = 'model/main_clm_general.txt';
-% Trained on in-the-wild
-%model = 'model/main_clm_wild.txt';
 
-% Trained on in the wild and multi-pie data (more accurate CLNF model)
+% Uncomment the below models if you want to try them
-model = 'model/main_clnf_general.txt';
+%model = 'model/main_clnf_wild.txt'; % Trained on in-the-wild data only
-% Trained on in-the-wild
-%model = 'model/main_clnf_wild.txt';
 
-command = executable;
+%model = 'model/main_clm_general.txt'; % Trained on in the wild and multi-pie data (less accurate SVR/CLM model)
-command = cat(2, command, [' -mloc "', model, '"']);
+%model = 'model/main_clm_wild.txt'; % Trained on in-the-wild
-% add all videos to single argument list (so as not to load the model anew
+
-% for every video)
+% Create a command that will run the tracker on set of videos and display the output 
+command = sprintf('%s -mloc "%s" ', executable, model);
+
+% add all videos to single argument list by appending -f comments
+% so as not to load the model anew for every video)
 for i=1:numel(in_files)
-    
     inputFile = ['../../samples/', in_files(i).name];        
-    [~, name, ~] = fileparts(inputFile);
-        
     command = cat(2, command, [' -f "' inputFile '" ']);
-    
-    if(verbose)
-        outputVideo = ['"' output name '.avi' '"'];
-        command = cat(2, command, [' -ov ' outputVideo]);
-    end
-                 
 end
 
+% Call the executable
 if(isunix)
     unix(command);
 else

matlab_runners/Demos/run_test_img_seq.m

@@ -0,0 +1,29 @@
+% A test script on image sequences, making sure grayscale and 16 bit
+% sequences work
+
+clear
+
+% The location executable will depend on the OS
+if(isunix)
+    executable = '"../../build/bin/FeatureExtraction"';
+else
+    executable = '"../../x64/Release/FeatureExtraction.exe"';
+end
+
+% Input file
+in_dirs = {'../../samples/image_sequence',...
+    '../../samples/image_sequence_gray', ...
+    '../../samples/image_sequence_16bit'};
+
+% Where to store the output
+output_dir = './processed_features/';
+
+for i=1:numel(in_dirs)
+    command = sprintf('%s -fdir "%s" -out_dir "%s" -verbose', executable, in_dirs{i}, output_dir);
+
+    if(isunix)
+        unix(command);
+    else
+        dos(command);
+    end
+end

matlab_runners/Feature Point Experiments/Run_OF_on_images.m

@@ -26,9 +26,9 @@ else
 end
       
 if(isunix)
-    command = '"../../build/bin/FaceLandmarkImg"';
+    executable = '"../../build/bin/FaceLandmarkImg"';
 else
-    command = '"../../x64/Release/FaceLandmarkImg.exe"';
+    executable = '"../../x64/Release/FaceLandmarkImg.exe"';
 end
     
 if(any(strcmp(varargin, 'model')))
@@ -44,24 +44,13 @@ else
     multi_view = 0;
 end
 
-command = cat(2, command, [' -mloc ' model ' ']);
+command = sprintf('%s -mloc %s -multi_view %s -2Dfp ', executable, model, num2str(multi_view));
-command = cat(2, command, [' -multi_view ' num2str(multi_view) ' ']);
 
 tic
-parfor i=1:numel(dataset_dirs)
+for i=1:numel(dataset_dirs)
     
-    input_loc = ['-fdir "', dataset_dirs{i}, '" '];
+    command_c = sprintf('%s -fdir "%s" -bboxdir "%s" -out_dir "%s" -wild ',...
-    command_c = cat(2, command, input_loc);
+        command, dataset_dirs{i},  dataset_dirs{i}, output_loc);
-        
-    out_loc = ['-ofdir "', output_loc, '" '];
-    command_c = cat(2, command_c, out_loc);
- 
-    if(verbose)
-        out_im_loc = ['-oidir "', output_loc, '" '];
-        command_c = cat(2, command_c, out_im_loc);
-    end
-    
-    command_c = cat(2, command_c, ' -wild ');
     
     if(isunix)
         unix(command_c, '-echo');
@@ -80,7 +69,7 @@ dirs = {[database_root '/AFW/'];
     [database_root '/helen/testset/'];
     [database_root 'lfpw/testset/'];};
 
-landmark_dets = dir([output_loc '/*.pts']);
+landmark_dets = dir([output_loc '/*.csv']);
 
 landmark_det_dir = [output_loc '/'];
 
@@ -92,6 +81,12 @@ shapes = zeros(68,2,num_imgs);
 
 curr = 0;
 
+% work out which columns in the csv file are relevant
+tab = readtable([landmark_det_dir, landmark_dets(1).name]);
+column_names = tab.Properties.VariableNames;
+landmark_inds_x = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'x_'));
+landmark_inds_y = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'y_'));
+
 for i=1:numel(dirs)
     
     
@@ -101,9 +96,11 @@ for i=1:numel(dirs)
         curr = curr+1;
         
         gt_landmarks = dlmread([dirs{i}, gt_labels(g).name], ' ', 'A4..B71');
-       
+        [~, name, ~] = fileparts(gt_labels(g).name);
         % find the corresponding detection       
-        landmark_det = dlmread([landmark_det_dir, gt_labels(g).name], ' ', 'A4..B71');
+        all_params  = dlmread([landmark_det_dir, name, '.csv'], ',', 1, 0);
+
+        landmark_det = [all_params(landmark_inds_x); all_params(landmark_inds_y)]';
         
         labels(:,:,curr) = gt_landmarks;
             
@@ -126,8 +123,8 @@ if(size(shapes,2) == 66 && size(labels,2) == 68)
     shapes = shapes(inds_66,:,:);
 end
 
-% Center the pixel
+% Center the pixel, and convert to OCV format
-labels = labels - 0.5;
+labels = labels - 1.5;
 
 err_outline = compute_error(labels, shapes);
 

matlab_runners/Feature Point Experiments/results/landmark_detections.txt

@@ -1,9 +1,9 @@
 Type, mean, median
-err clnf: 0.054348, 0.040034
+err clnf: 0.054473, 0.040001
-err clnf wild: 0.053107, 0.038525
+err clnf wild: 0.053173, 0.038511
-err svr: 0.070552, 0.050640
+err svr: 0.070548, 0.050640
-err svr wild: 0.067452, 0.048706
+err svr wild: 0.067535, 0.048691
-err clnf no out: 0.043081, 0.029782
+err clnf no out: 0.043240, 0.030040
-err clnf wild no out: 0.041386, 0.027463
+err clnf wild no out: 0.041460, 0.027516
-err svr no out: 0.058766, 0.038836
+err svr no out: 0.058769, 0.038858
-err svr wild no out: 0.054020, 0.036252
+err svr wild no out: 0.054168, 0.036253

matlab_runners/Feature Point Experiments/run_OpenFace_feature_point_tests_300W.m

@@ -9,40 +9,26 @@ elseif(exist('D:/Dropbox/Dropbox/AAM/test data/', 'file'))
     database_root = 'D:/Dropbox/Dropbox/AAM/test data/';
 elseif(exist('F:/Dropbox/AAM/test data/', 'file'))
     database_root = 'F:/Dropbox/AAM/test data/';
-else
+elseif(exist('/multicomp/datasets/300-W/', 'file'))
     database_root = '/multicomp/datasets/300-W/';
+elseif(exist('/media/tadas/5E08AE0D08ADE3ED/Dropbox/AAM/test data/', 'file'))
+    database_root = '/media/tadas/5E08AE0D08ADE3ED/Dropbox/AAM/test data/';
 end
 
 %% Run using CLNF in the wild model
 out_clnf = [curr_dir '/out_wild_clnf_wild/'];
-if(~exist(out_clnf, 'file'))
-   mkdir(out_clnf); 
-end
-
 [err_clnf_wild, err_no_out_clnf_wild] = Run_OF_on_images(out_clnf, database_root, 'use_afw', 'use_lfpw', 'use_ibug', 'use_helen', 'verbose', 'model', 'model/main_clnf_wild.txt', 'multi_view', 1);
 
 %% Run using SVR model
 out_svr = [curr_dir '/out_wild_svr_wild/'];
-if(~exist(out_svr, 'file'))
-   mkdir(out_svr); 
-end
-
 [err_svr_wild, err_no_out_svr_wild] = Run_OF_on_images(out_svr, database_root, 'use_afw', 'use_lfpw', 'use_ibug', 'use_helen', 'verbose', 'model', 'model/main_clm_wild.txt', 'multi_view', 1);                
 
 %% Run using general CLNF model
 out_clnf = [curr_dir '/out_wild_clnf/'];
-if(~exist(out_clnf, 'file'))
-   mkdir(out_clnf); 
-end
-
 [err_clnf, err_no_out_clnf] = Run_OF_on_images(out_clnf, database_root, 'use_afw', 'use_lfpw', 'use_ibug', 'use_helen', 'verbose', 'model', 'model/main_clnf_general.txt', 'multi_view', 1);
 
 %% Run using SVR model
 out_svr = [curr_dir '/out_wild_svr/'];
-if(~exist(out_svr, 'file'))
-   mkdir(out_svr); 
-end
-
 [err_svr, err_no_out_svr] = Run_OF_on_images(out_svr, database_root, 'use_afw', 'use_lfpw', 'use_ibug', 'use_helen', 'verbose', 'model', 'model/main_clm_general.txt', 'multi_view', 1);                
 
 %%
@@ -93,7 +79,7 @@ load('landmark_det_baselines/zhu_wild.mat');
 load('out_wild_clnf_wild/res.mat');    
 for i=1:size(labels,3)
     
-    diffs = squeeze(sum(sum(bsxfun(@plus, labels_all(18:end,:,:)-0.5, - labels([18:60,62:64,66:end],:,i)),1),2));
+    diffs = squeeze(sum(sum(bsxfun(@plus, labels_all(18:end,:,:)-1.5, - labels([18:60,62:64,66:end],:,i)),1),2));
     inds_in_cpp = cat(1, inds_in_cpp, find(diffs == 0));
 
 end

matlab_runners/Feature Point Experiments/run_yt_dataset.m

@@ -18,6 +18,8 @@ elseif(exist('D:/Dropbox/Dropbox/AAM/test data/', 'file'))
     database_root = 'D:/Dropbox/Dropbox/AAM/test data/';
 elseif(exist('F:/Dropbox/AAM/test data/', 'file'))
     database_root = 'F:/Dropbox/AAM/test data/';
+elseif(exist('/media/tadas/5E08AE0D08ADE3ED/Dropbox/AAM/test data/', 'file'))
+    database_root = '/media/tadas/5E08AE0D08ADE3ED/Dropbox/AAM/test data/';
 else
     database_root = '/multicomp/datasets/';
 end
@@ -26,19 +28,14 @@ database_root = [database_root, '/ytceleb/'];
 
 in_vids = dir([database_root '/*.avi']);
 
-command = executable;
+command = sprintf('%s -2Dfp -out_dir "%s" ', executable, output);
-command = cat(2, command, ' -no3Dfp -noMparams -noPose -noGaze -noAUs ');
 % add all videos to single argument list (so as not to load the model anew
 % for every video)
 for i=1:numel(in_vids)
     
-    [~, name, ~] = fileparts(in_vids(i).name);
-    
-    % where to output tracking results
-    outputFile_fp = [output name '_fp.txt'];
     in_file_name = [database_root, '/', in_vids(i).name];        
     
-    command = cat(2, command, [' -f "' in_file_name '" -of "' outputFile_fp '"']);                     
+    command = cat(2, command, [' -f "' in_file_name '" ']);                     
 end
 
 if(isunix)
@@ -54,21 +51,13 @@ if(~exist(output, 'file'))
     mkdir(output)
 end
 
-command = executable;
+command = sprintf('%s -2Dfp -out_dir "%s" -mloc model/main_clm_general.txt ', executable, output);
-command = cat(2, command, ' -mloc model/main_clm_general.txt ');
-command = cat(2, command, ' -no3Dfp -noMparams -noPose -noGaze -noAUs ');
 
 % add all videos to single argument list (so as not to load the model anew
 % for every video)
 for i=1:numel(in_vids)    
-    
-    [~, name, ~] = fileparts(in_vids(i).name);
-    
-    % where to output tracking results
-    outputFile_fp = [output name '_fp.txt'];
     in_file_name = [database_root, '/', in_vids(i).name];            
-    
+    command = cat(2, command, [' -f "' in_file_name '"']);                     
-    command = cat(2, command, [' -f "' in_file_name '" -of "' outputFile_fp '"']);                     
 end
 
 if(isunix)
@@ -80,7 +69,7 @@ end
 d_loc = 'yt_features/';
 d_loc_clm = 'yt_features_clm/';
 
-files_yt = dir([d_loc, '/*.txt']);
+files_yt = dir([d_loc, '/*.csv']);
 preds_all = [];
 preds_all_clm = [];
 gts_all = [];
@@ -104,7 +93,7 @@ for i = 1:numel(files_yt)
     pred_landmarks_clm(:,1,:) = xs';
     pred_landmarks_clm(:,2,:) = ys';    
     
-    load([database_root, name(1:end-3), '.mat']);
+    load([database_root, name, '.mat']);
     preds_all = cat(3, preds_all, pred_landmarks);
     preds_all_clm = cat(3, preds_all_clm, pred_landmarks_clm);
     gts_all = cat(3, gts_all, labels);

matlab_runners/Full_test_suite.m

@@ -23,7 +23,7 @@ cd('../');
 cd('Action Unit Experiments');
 run_AU_prediction_Bosphorus
 assert(mean(cccs_reg) > 0.56);
-assert(mean(f1s_class) > 0.46);
+assert(mean(f1s_class) > 0.49);
 
 run_AU_prediction_BP4D
 assert(mean(ints_cccs) > 0.6);
@@ -48,10 +48,14 @@ assert(median_error < 9.0)
 cd('../');
 
 %% Demos
+clear;
+close all;
 cd('Demos');
 run_demo_images;
 run_demo_videos;
 run_demo_video_multi;
+run_demo_align_size;
+run_test_img_seq;
 feature_extraction_demo_vid;
 feature_extraction_demo_img_seq;
 gaze_extraction_demo_vid;

matlab_runners/Gaze Experiments/extract_mpii_gaze_test.m

@@ -29,22 +29,21 @@ else
     executable = '"../../x64/Release/FaceLandmarkImg.exe"';
 end
 
-command = sprintf('%s -fx 1028 -fy 1028 -gaze ', executable);
+command = sprintf('%s -fx 1028 -fy 1028  ', executable);
 p_dirs = dir([database_root, 'p*']);
 
 parfor p=1:numel(p_dirs)
     tic
 
-    input_loc = ['-fdir "', [database_root, p_dirs(p).name], '" '];
+    input_loc = ['-gaze -fdir "', [database_root, p_dirs(p).name], '" '];
-    out_img_loc = ['-oidir "', [output, p_dirs(p).name], '" '];
+    out_img_loc = ['-out_dir "', [output, p_dirs(p).name], '" '];
-    out_p_loc = ['-opdir "', [output, p_dirs(p).name], '" '];
+    command_c = cat(2, command, input_loc, out_img_loc);
-    command_c = cat(2, command, input_loc, out_img_loc, out_p_loc);
 
     if(isunix)
         unix(command_c, '-echo');
     else
         dos(command_c);
-    end;
+    end
 
 end
 %%
@@ -65,29 +64,36 @@ for p=1:numel(p_dirs)
 
     for i=1:size(filenames, 1)
 
-        fname = sprintf('%s/%s/%d_%d_%d_%d_%d_%d_%d_det_0.pose', output, p_dirs(p).name,...
+        fname = sprintf('%s/%s/%d_%d_%d_%d_%d_%d_%d.csv', output, p_dirs(p).name,...
              filenames(i,1), filenames(i,2), filenames(i,3), filenames(i,4),...
              filenames(i,5), filenames(i,6), filenames(i,7));
-        try            
+        
-            A = dlmread(fname, ' ', 'A79..F79');       
+        if(p==1 && i==1)
-            valid = true;
+            % First read in the column names
-        catch
+            tab = readtable(fname);
-            A = zeros(1,6);
+            column_names = tab.Properties.VariableNames;
-            A(1,3) = -1;
+
-            A(1,6) = -1;
+            gaze_0_ids = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'gaze_0_'));
-            valid = false;
+            gaze_1_ids = cellfun(@(x) ~isempty(x) && x==1, strfind(column_names, 'gaze_1_'));
         end
         
-        head_rot = headpose(i,1:3);
+        if(exist(fname, 'file'))
+            all_params  = dlmread(fname, ',', 1, 0);
+        else
+            all_params = [];
+        end
         
-        predictions_r(curr,:) = A(1:3);
+        % If there was a face detected
-        predictions_l(curr,:) = A(4:6);  
+        if(size(all_params,1)>0)
-        
+            predictions_r(curr,:) = all_params(1,gaze_0_ids);
-        if(~valid)
+            predictions_l(curr,:) = all_params(1,gaze_1_ids);
+        else
             predictions_r(curr,:) = [0,0,-1];
             predictions_l(curr,:) = [0,0,-1];            
         end
 
+        head_rot = headpose(i,1:3);
+ 
         gt_r(curr,:) = data.right.gaze(i,:)';
         gt_r(curr,:) = gt_r(curr,:) / norm(gt_r(curr,:));
         gt_l(curr,:) = data.left.gaze(i,:)';